RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 GALNTL6Q49A17 601 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 TDRD12Q587J7 1177 aaKnown RBP5.08□□□□□ -1.6
RIF1-207ENST00000454583 HABP4Q5JVS0 413 aaKnown RBP5.08□□□□□ -1.6
RIF1-207ENST00000454583 TTC39BQ5VTQ0 682 aaPredicted RBP5.08□□□□□ -1.6
RIF1-207ENST00000454583 ANKRD22Q5VYY1 191 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 CES4AQ5XG92 561 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 C8orf74Q6P047 294 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 ZNF449Q6P9G9 518 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 RANBP10Q6VN20 620 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 GALNT7Q86SF2 657 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 PHLDB2Q86SQ0 1253 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 SETD3Q86TU7 594 aaPredicted RBP5.08□□□□□ -1.6
RIF1-207ENST00000454583 MAML2Q8IZL2 1156 aaPredicted RBP5.08□□□□□ -1.6
RIF1-207ENST00000454583 ZCCHC9Q8N567 271 aaKnown RBP5.08□□□□□ -1.6
RIF1-207ENST00000454583 SIGLEC10Q96LC7 697 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 SSU72Q9NP77 194 aaKnown RBP5.08□□□□□ -1.6
RIF1-207ENST00000454583 ARGLU1Q9NWB6 273 aaPredicted RBP5.08□□□□□ -1.6
RIF1-207ENST00000454583 NFKBIL1Q9UBC1 381 aaPredicted RBP5.08□□□□□ -1.6
RIF1-207ENST00000454583 SAE1Q9UBE0 346 aaPredicted RBP5.08□□□□□ -1.6
RIF1-207ENST00000454583 ACTL7AQ9Y615 435 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 CCDC195A0A1B0GUA6 201 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 PER2O15055 1255 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 FGF10O15520 208 aaPredicted RBP5.08□□□□□ -1.6
RIF1-207ENST00000454583 ATP9BO43861 1147 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 TYROBPO43914 113 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 TLR5O60602 858 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 LAMP2P13473 410 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 SULT1E1P49888 294 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 ZNF211Q13398 564 aaPredicted RBP5.08□□□□□ -1.6
RIF1-207ENST00000454583 ADGRF1Q5T601 910 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 CCDC149Q6ZUS6 474 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 MICALCLQ6ZW33 695 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 PRUNE1Q86TP1 453 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 MFSD6LQ8IWD5 586 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 ADAM32Q8TC27 787 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 FGF13Q92913 245 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 ISG20Q96AZ6 181 aaKnown RBP5.08□□□□□ -1.6
RIF1-207ENST00000454583 MRGPRX2Q96LB1 330 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 ZNF599Q96NL3 588 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 MCCC1Q96RQ3 725 aaPredicted RBP5.08□□□□□ -1.6
RIF1-207ENST00000454583 FAM204AQ9H8W3 233 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 FBRSL1Q9HCM7 1045 aaKnown RBP5.08□□□□□ -1.6
RIF1-207ENST00000454583 CD320Q9NPF0 282 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 GKN1Q9NS71 199 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.08□□□□□ -1.6
RIF1-207ENST00000454583 TMPRSS11EQ9UL52 423 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 FREM2Q5SZK8 3169 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 A0A0D9SEW6 157 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.08□□□□□ -1.6
RIF1-207ENST00000454583 M0QYT0 321 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 SGTAO43765 313 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 KRT7P08729 469 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 ETS1P14921 441 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 HOXB8P17481 243 aaPredicted RBP5.08□□□□□ -1.6
RIF1-207ENST00000454583 PTPN2P17706 415 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 ERCC2P18074 760 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 GLDCP23378 1020 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 PSMA2P25787 234 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 NRIP1P48552 1158 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 DR1Q01658 176 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 SMTNL2Q2TAL5 461 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 SLC45A4Q5BKX6 768 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 PPP2R2DQ66LE6 453 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 ATG14Q6ZNE5 492 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 MIB1Q86YT6 1006 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 ZNF567Q8N184 647 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 TMEM169Q96HH4 297 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 NCAPGQ9BPX3 1015 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 ZBED2Q9BTP6 218 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 EMILIN2Q9BXX0 1053 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 MRM3Q9HC36 420 aaKnown RBP5.08□□□□□ -1.6
RIF1-207ENST00000454583 GPATCH2LQ9NWQ4 482 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 MOCS1Q9NZB8 636 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 UXTQ9UBK9 157 aaPredicted RBP5.08□□□□□ -1.6
RIF1-207ENST00000454583 DNMT3LQ9UJW3 386 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 NR2E3Q9Y5X4 410 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 ACTL7BQ9Y614 415 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 FRYQ5TBA9 3013 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 ZCWPW2A0A1B0GU75 182 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 A0A1W2PQF6 199 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 TRDMT1O14717 391 aaKnown RBP5.07□□□□□ -1.6
RIF1-207ENST00000454583 ADAM23O75077 832 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 SPATA31D3P0C874 917 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 TSHRP16473 764 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 RPL22P35268 128 aaKnown RBP5.07□□□□□ -1.6
RIF1-207ENST00000454583 GRIK1P39086 918 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 CDH4P55283 916 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 ZP2Q05996 745 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 NSUN2Q08J23 767 aaKnown RBP eCLIP5.07□□□□□ -1.6
RIF1-207ENST00000454583 SMAD4Q13485 552 aaKnown RBP5.07□□□□□ -1.6
RIF1-207ENST00000454583 MESDQ14696 234 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 HSF5Q4G112 596 aaPredicted RBP5.07□□□□□ -1.6
RIF1-207ENST00000454583 LACTB2Q53H82 288 aaPredicted RBP5.07□□□□□ -1.6
RIF1-207ENST00000454583 TMEM196Q5HYL7 178 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 TANGO2Q6ICL3 276 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 CCDC137Q6PK04 289 aaKnown RBP5.07□□□□□ -1.6
RIF1-207ENST00000454583 PARM1Q6UWI2 310 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 SPATA31D4Q6ZUB0 917 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 HOOK3Q86VS8 718 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 RAVER1Q8IY67 606 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms