RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 FAM237AA0A1B0GTK4 181 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TCAF2A6NFQ2 919 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 I6L893 689 aaPredicted RBP6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 BIN1O00499 593 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SCAMP1O15126 338 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 RAD51BO15315 384 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 RRP8O43159 456 aaKnown RBP6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 THAP12O43422 761 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SMAD6O43541 496 aaKnown RBP6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 STX10O60499 249 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 RNGTTO60942 597 aaKnown RBP6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 USP12O75317 370 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 CSO75390 466 aaKnown RBP6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 CNTN5O94779 1100 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 LETM1O95202 739 aaPredicted RBP6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 MOCS3O95396 460 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 MT-CO3P00414 261 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 IGLV3-25P01717 112 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ERBB2P04626 1255 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 PAEPP09466 180 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 THEGLP0DJG4 465 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 DGKAP23743 735 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TBXAS1P24557 533 aaPredicted RBP6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 STX17P56962 302 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 YWHAEP62258 255 aaKnown RBP6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 KCNH2Q12809 1159 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 NME3Q13232 169 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SRSF6Q13247 344 aaKnown RBP6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ARID5BQ14865 1188 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 RTP5Q14D33 572 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 E2F5Q15329 346 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 CDKN3Q16667 212 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ALFQ53S48 1182 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 FBXL22Q6P050 247 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 GUSBP11Q6P575 273 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 GCNT7Q6ZNI0 430 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 NYAP1Q6ZVC0 841 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 FAM183BPQ6ZVS7 135 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 GPR155Q7Z3F1 870 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ZNF605Q86T29 641 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 CCDC117Q8IWD4 279 aaPredicted RBP6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 RBFAQ8N0V3 343 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TTC39CQ8N584 583 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TMEM145Q8NBT3 493 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 C1orf131Q8NDD1 294 aaKnown RBP6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 OR6K2Q8NGY2 324 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 LMO3Q8TAP4 145 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 OR8D1Q8WZ84 308 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 IRGQQ8WZA9 623 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 FGF11Q92914 225 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 FAM131CQ96AQ9 280 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 VCPIP1Q96JH7 1222 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SPAG5Q96R06 1193 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 CPXM1Q96SM3 734 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 PRMT1Q99873 361 aaKnown RBP6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 GTPBP4Q9BZE4 634 aaKnown RBP6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SCAND2PQ9GZW5 306 aaPredicted RBP6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 INTS2Q9H0H0 1204 aaKnown RBP6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 MUC3BQ9H195 1237 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 DNAJC28Q9NX36 388 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SCML1Q9UN30 329 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SATB2Q9UPW6 733 aa6.16□□□□□ -1.42
HLA-DPA3-207ENST00000454398 A0A0D9SEW6 157 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TARSL2A2RTX5 802 aaKnown RBP6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 YKT6O15498 198 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 KLK10O43240 276 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 OPA1O60313 960 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 DFNA5O60443 496 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 PAGE1O75459 146 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 PIAS2O75928 621 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 FBXO21O94952 628 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ADCY5O95622 1261 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 CELA2BP08218 269 aaPredicted RBP6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SRPRAP08240 638 aaKnown RBP6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SRCP12931 536 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ZNF18P17022 549 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TGM2P21980 687 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 BMP6P22004 513 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ACP1P24666 158 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 GKP32189 559 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 USP8P40818 1118 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 GPD2P43304 727 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 PDX1P52945 283 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 PCBP4P57723 403 aaKnown RBP6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 NUCB2P80303 420 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 NFKB2Q00653 900 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 CFHR1Q03591 330 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ENPEPQ07075 957 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 MAPK8IP2Q13387 824 aaPredicted RBP6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 NNTQ13423 1086 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 AUHQ13825 339 aaKnown RBP6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 FGL2Q14314 439 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 STAT4Q14765 748 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 DLG2Q15700 870 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ZNF284Q2VY69 593 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 DEFB133Q30KQ1 61 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SETMARQ53H47 684 aaPredicted RBP6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 C2CD6Q53TS8 623 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SLC45A4Q5BKX6 768 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ZNF658Q5TYW1 1059 aaPredicted RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms