RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 FAM72BQ86X60 149 aa11.39□□□□□ -0.59
DDR1-239ENST00000452441 NRG4Q8WWG1 115 aa11.39□□□□□ -0.59
DDR1-239ENST00000452441 RMDN1Q96DB5 314 aa11.39□□□□□ -0.59
DDR1-239ENST00000452441 NT5MQ9NPB1 228 aa11.39□□□□□ -0.59
DDR1-239ENST00000452441 FAM105AQ9NUU6 356 aa11.39□□□□□ -0.59
DDR1-239ENST00000452441 RBM22Q9NW64 420 aaKnown RBP eCLIP11.39□□□□□ -0.592e-7■■■□□ 16.7
DDR1-239ENST00000452441 GIPC1O14908 333 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 MAP3K13O43283 966 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 MPSTP25325 297 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 TRIM32Q13049 653 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 FUT11Q495W5 492 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 SLC39A12Q504Y0 691 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 ZNF470Q6ECI4 717 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 DENND6AQ8IWF6 608 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.38□□□□□ -0.59
DDR1-239ENST00000452441 SHCBP1Q8NEM2 672 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 CEP70Q8NHQ1 597 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 SCAMP5Q8TAC9 235 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 ATP6V1E2Q96A05 226 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 FGD4Q96M96 766 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 SP110Q9HB58 689 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 LRCH1Q9Y2L9 728 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 LAMA2P24043 3122 aaKnown RBP11.38□□□□□ -0.59
DDR1-239ENST00000452441 WDR81Q562E7 1941 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 DLDP09622 509 aaKnown RBP11.38□□□□□ -0.59
DDR1-239ENST00000452441 SETSIPP0DME0 302 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 CHRM1P11229 460 aaPredicted RBP11.38□□□□□ -0.59
DDR1-239ENST00000452441 ZNF792Q3KQV3 632 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 PACS1Q6VY07 963 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 ULK2Q8IYT8 1036 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 ZNF567Q8N184 647 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 CDC26Q8NHZ8 85 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 PAAF1Q9BRP4 392 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 A0A0A0MRY4 1105 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 STX16-NPEPL1H3BU86 382 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 CHADO15335 359 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 LTFP02788 710 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 RAG1P15918 1043 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 TPD52P55327 224 aaPredicted RBP11.38□□□□□ -0.59
DDR1-239ENST00000452441 GHRHRQ02643 423 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 SOX4Q06945 474 aaPredicted RBP11.38□□□□□ -0.59
DDR1-239ENST00000452441 AP1ARQ63HQ0 302 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 ACAD11Q709F0 780 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 ZNF781Q8N8C0 355 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 ST13P5Q8NFI4 369 aaPredicted RBP11.38□□□□□ -0.59
DDR1-239ENST00000452441 ABTB1Q969K4 478 aaPredicted RBP11.38□□□□□ -0.59
DDR1-239ENST00000452441 PTCD3Q96EY7 689 aaKnown RBP11.38□□□□□ -0.59
DDR1-239ENST00000452441 SPATA13Q96N96 652 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 RPRD1AQ96P16 312 aaPredicted RBP11.38□□□□□ -0.59
DDR1-239ENST00000452441 COPS7BQ9H9Q2 264 aaPredicted RBP11.38□□□□□ -0.59
DDR1-239ENST00000452441 KCNK13Q9HB14 408 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 ARHGEF4Q9NR80 690 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 PAPOLBQ9NRJ5 636 aaKnown RBP11.38□□□□□ -0.59
DDR1-239ENST00000452441 SNX15Q9NRS6 342 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 THAP1Q9NVV9 213 aa11.38□□□□□ -0.59
DDR1-239ENST00000452441 TMEM233B4DJY2 109 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 TKTP29401 623 aaKnown RBP11.37□□□□□ -0.59
DDR1-239ENST00000452441 ZNF132P52740 706 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 MAPK10P53779 464 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 MED21Q13503 144 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 PRKD1Q15139 912 aaPredicted RBP11.37□□□□□ -0.59
DDR1-239ENST00000452441 PPM1LQ5SGD2 360 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 FAM171A1Q5VUB5 890 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 TMPRSS6Q8IU80 811 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 PLD6Q8N2A8 252 aaKnown RBP11.37□□□□□ -0.59
DDR1-239ENST00000452441 ZNF276Q8N554 614 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 ATAD1Q8NBU5 361 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 CERS2Q96G23 380 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 ZBED2Q9BTP6 218 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 CCDC68Q9H2F9 335 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 SSU72Q9NP77 194 aaKnown RBP11.37□□□□□ -0.59
DDR1-239ENST00000452441 PPME1Q9Y570 386 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 PSME4Q14997 1843 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 ERI2A8K979 691 aaKnown RBP11.37□□□□□ -0.59
DDR1-239ENST00000452441 NRP1O14786 923 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 GLRA3O75311 464 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 L1CAMP32004 1257 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 FCGRTP55899 365 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 MPP1Q00013 466 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 CRHR2Q13324 411 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 FLOT2Q14254 428 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 CCDC117Q8IWD4 279 aaPredicted RBP11.37□□□□□ -0.59
DDR1-239ENST00000452441 MZB1Q8WU39 189 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 SKA1Q96BD8 255 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 SNX27Q96L92 541 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 MTG1Q9BT17 334 aaPredicted RBP11.37□□□□□ -0.59
DDR1-239ENST00000452441 FTHL17Q9BXU8 183 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 C20orf27Q9GZN8 174 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 PIGVQ9NUD9 493 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 SSX2IPQ9Y2D8 614 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 TEX264Q9Y6I9 313 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 GPR182O15218 404 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 ASGR1P07306 291 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 BPGMP07738 259 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 ODC1P11926 461 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 VAV1P15498 845 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 YWHAHQ04917 246 aaPredicted RBP11.37□□□□□ -0.59
DDR1-239ENST00000452441 PDE1CQ14123 709 aaPredicted RBP11.37□□□□□ -0.59
DDR1-239ENST00000452441 PITRM1Q5JRX3 1037 aa11.37□□□□□ -0.59
DDR1-239ENST00000452441 CHSY1Q86X52 802 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms