RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 LRCH4O75427 683 aa16.5■□□□□ 0.23
SCAMP4-205ENST00000452128 ACVRL1P37023 503 aa16.5■□□□□ 0.23
SCAMP4-205ENST00000452128 EIF4A3P38919 411 aaKnown RBP16.5■□□□□ 0.23
SCAMP4-205ENST00000452128 MAPKAPK2P49137 400 aa16.5■□□□□ 0.23
SCAMP4-205ENST00000452128 IRX4P78413 519 aa16.5■□□□□ 0.23
SCAMP4-205ENST00000452128 ARF5P84085 180 aa16.5■□□□□ 0.23
SCAMP4-205ENST00000452128 GNA12Q03113 381 aa16.5■□□□□ 0.23
SCAMP4-205ENST00000452128 CST6Q15828 149 aa16.5■□□□□ 0.23
SCAMP4-205ENST00000452128 CA9Q16790 459 aa16.5■□□□□ 0.23
SCAMP4-205ENST00000452128 RSPO4Q2I0M5 234 aaPredicted RBP16.5■□□□□ 0.23
SCAMP4-205ENST00000452128 LYSMD4Q5XG99 296 aa16.5■□□□□ 0.23
SCAMP4-205ENST00000452128 ALKBH5Q6P6C2 394 aaKnown RBP16.5■□□□□ 0.23
SCAMP4-205ENST00000452128 USP30Q70CQ3 517 aa16.5■□□□□ 0.23
SCAMP4-205ENST00000452128 CYP2U1Q7Z449 544 aa16.5■□□□□ 0.23
SCAMP4-205ENST00000452128 GAS2L3Q86XJ1 694 aa16.5■□□□□ 0.23
SCAMP4-205ENST00000452128 AADATQ8N5Z0 425 aa16.5■□□□□ 0.23
SCAMP4-205ENST00000452128 PIGKQ92643 395 aa16.5■□□□□ 0.23
SCAMP4-205ENST00000452128 ARHGEF2Q92974 986 aaKnown RBP16.5■□□□□ 0.23
SCAMP4-205ENST00000452128 ZNF653Q96CK0 615 aa16.5■□□□□ 0.23
SCAMP4-205ENST00000452128 TBC1D31Q96DN5 1066 aa16.5■□□□□ 0.23
SCAMP4-205ENST00000452128 TRIM11Q96F44 468 aa16.5■□□□□ 0.23
SCAMP4-205ENST00000452128 ORAI3Q9BRQ5 295 aa16.5■□□□□ 0.23
SCAMP4-205ENST00000452128 C2orf49Q9BVC5 232 aaPredicted RBP16.5■□□□□ 0.23
SCAMP4-205ENST00000452128 KLC2Q9H0B6 622 aa16.5■□□□□ 0.23
SCAMP4-205ENST00000452128 THAP2Q9H0W7 228 aa16.5■□□□□ 0.23
SCAMP4-205ENST00000452128 CAPN10Q9HC96 672 aa16.5■□□□□ 0.23
SCAMP4-205ENST00000452128 SARDHQ9UL12 918 aa16.5■□□□□ 0.23
SCAMP4-205ENST00000452128 SCML1Q9UN30 329 aa16.5■□□□□ 0.23
SCAMP4-205ENST00000452128 NUP205Q92621 2012 aa16.5■□□□□ 0.23
SCAMP4-205ENST00000452128 KNL1Q8NG31 2342 aa16.5■□□□□ 0.23
SCAMP4-205ENST00000452128 CHD5Q8TDI0 1954 aa16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 CNOT1A5YKK6 2376 aaKnown RBP16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 ANKRD62A6NC57 917 aa16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 RNF103O00237 685 aa16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 CDX4O14627 284 aaPredicted RBP16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 MCF2LO15068 1137 aa16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 TPM3P06753 285 aa16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 PSMA2P25787 234 aa16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 IL1R2P27930 398 aa16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 MIPP30301 263 aa16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 SLC8A1P32418 973 aa16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 DRD3P35462 400 aa16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 PCK1P35558 622 aa16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 METAP1P53582 386 aa16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 KRT83P78385 493 aa16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 SLC20A2Q08357 652 aa16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 TRIM14Q14142 442 aa16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 ELAVL3Q14576 367 aaKnown RBP16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 CACNA1EQ15878 2313 aa16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 TDRD12Q587J7 1177 aaKnown RBP16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 SCYL2Q6P3W7 929 aa16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 SLC23A3Q6PIS1 610 aa16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 ARMCX6Q7L4S7 300 aa16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 MMAAQ8IVH4 418 aaKnown RBP16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 RTL3Q8N8U3 475 aaKnown RBP16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 OR2A12Q8NGT7 310 aa16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 ARHGEF26Q96DR7 871 aa16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 HSPA12BQ96MM6 686 aa16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 GPR174Q9BXC1 333 aa16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 MUC3BQ9H195 1237 aa16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 RBSNQ9H1K0 784 aa16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 NEUROG2Q9H2A3 272 aa16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 SCINQ9Y6U3 715 aa16.49■□□□□ 0.23
SCAMP4-205ENST00000452128 RALGAPA1Q6GYQ0 2036 aa16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 PI4KAP42356 2102 aa16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 SPTBN2O15020 2390 aa16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 SSU72P8A0A1W2PR75 194 aa16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 LNP1A1A4G5 178 aa16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 SLC30A4O14863 429 aa16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 MID1O15344 667 aa16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 CTSLP07711 333 aa16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 ACADMP11310 421 aa16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 TCF4P15884 667 aa16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 NNMTP40261 264 aa16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 ID4P47928 161 aa16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 CLCN6P51797 869 aa16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 GALCP54803 685 aa16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 ACAP1Q15027 740 aa16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 EFHC2Q5JST6 749 aa16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 LINGO4Q6UY18 593 aa16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 CACUL1Q86Y37 369 aa16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 PSTKQ8IV42 348 aaKnown RBP16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 UMODL1-AS1Q8N2C9 162 aa16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 NIPA2Q8N8Q9 360 aa16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 NETO1Q8TDF5 533 aa16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 FOXJ1Q92949 421 aa16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 CHP1Q99653 195 aa16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 MAGEH1Q9H213 219 aa16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 C6orf106Q9H6K1 298 aaPredicted RBP16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 MRPL47Q9HD33 250 aaKnown RBP16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 GPATCH2LQ9NWQ4 482 aa16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 ACTL7AQ9Y615 435 aa16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 SLCO1B1Q9Y6L6 691 aa16.48■□□□□ 0.23
SCAMP4-205ENST00000452128 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.47■□□□□ 0.23
SCAMP4-205ENST00000452128 EIF3CLB5ME19 914 aaKnown RBP16.47■□□□□ 0.23
SCAMP4-205ENST00000452128 KHNYNO15037 678 aaKnown RBP16.47■□□□□ 0.23
SCAMP4-205ENST00000452128 ALOX15BO15296 676 aa16.47■□□□□ 0.23
SCAMP4-205ENST00000452128 MFAP3LO75121 409 aa16.47■□□□□ 0.23
SCAMP4-205ENST00000452128 NDUFS2O75306 463 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms