RNA–Protein interactions for RNA: ENST00000448745.5

CPSF7-206, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CPSF7, Length 1,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-206ENST00000448745 COG7P83436 770 aa8.59□□□□□ -1.03
CPSF7-206ENST00000448745 TMED1Q13445 227 aa8.59□□□□□ -1.03
CPSF7-206ENST00000448745 C15orf59Q2T9L4 293 aaPredicted RBP8.59□□□□□ -1.03
CPSF7-206ENST00000448745 VWA5B1Q5TIE3 1220 aa8.59□□□□□ -1.03
CPSF7-206ENST00000448745 IER5Q5VY09 327 aa8.59□□□□□ -1.03
CPSF7-206ENST00000448745 LHX8Q68G74 356 aa8.59□□□□□ -1.03
CPSF7-206ENST00000448745 HEATR6Q6AI08 1181 aaKnown RBP8.59□□□□□ -1.03
CPSF7-206ENST00000448745 SCARA3Q6AZY7 606 aa8.59□□□□□ -1.03
CPSF7-206ENST00000448745 SCYL2Q6P3W7 929 aa8.59□□□□□ -1.03
CPSF7-206ENST00000448745 DHRS4L2Q6PKH6 230 aa8.59□□□□□ -1.03
CPSF7-206ENST00000448745 MPZL3Q6UWV2 235 aa8.59□□□□□ -1.03
CPSF7-206ENST00000448745 CTU1Q7Z7A3 348 aaKnown RBP8.59□□□□□ -1.03
CPSF7-206ENST00000448745 EXOC8Q8IYI6 725 aa8.59□□□□□ -1.03
CPSF7-206ENST00000448745 RNF168Q8IYW5 571 aaPredicted RBP8.59□□□□□ -1.03
CPSF7-206ENST00000448745 DSELQ8IZU8 1212 aa8.59□□□□□ -1.03
CPSF7-206ENST00000448745 EFCAB3Q8N7B9 438 aa8.59□□□□□ -1.03
CPSF7-206ENST00000448745 BHLHE22Q8NFJ8 381 aaPredicted RBP8.59□□□□□ -1.03
CPSF7-206ENST00000448745 TSPAN14Q8NG11 270 aa8.59□□□□□ -1.03
CPSF7-206ENST00000448745 CEP70Q8NHQ1 597 aa8.59□□□□□ -1.03
CPSF7-206ENST00000448745 PPTC7Q8NI37 304 aa8.59□□□□□ -1.03
CPSF7-206ENST00000448745 RDH11Q8TC12 318 aa8.59□□□□□ -1.03
CPSF7-206ENST00000448745 PDCD6IPQ8WUM4 868 aaKnown RBP8.59□□□□□ -1.03
CPSF7-206ENST00000448745 KBTBD7Q8WVZ9 684 aa8.59□□□□□ -1.03
CPSF7-206ENST00000448745 TOP1MTQ969P6 601 aa8.59□□□□□ -1.03
CPSF7-206ENST00000448745 SPATA13Q96N96 652 aa8.59□□□□□ -1.03
CPSF7-206ENST00000448745 CCT7Q99832 543 aa8.59□□□□□ -1.03
CPSF7-206ENST00000448745 SNRNP25Q9BV90 132 aaKnown RBP8.59□□□□□ -1.03
CPSF7-206ENST00000448745 NUF2Q9BZD4 464 aa8.59□□□□□ -1.03
CPSF7-206ENST00000448745 ELOVL4Q9GZR5 314 aa8.59□□□□□ -1.03
CPSF7-206ENST00000448745 ILKAPQ9H0C8 392 aaPredicted RBP8.59□□□□□ -1.03
CPSF7-206ENST00000448745 RNPEPQ9H4A4 650 aa8.59□□□□□ -1.03
CPSF7-206ENST00000448745 PDZD7Q9H5P4 517 aa8.59□□□□□ -1.03
CPSF7-206ENST00000448745 COPS7BQ9H9Q2 264 aaPredicted RBP8.59□□□□□ -1.03
CPSF7-206ENST00000448745 PLGRKTQ9HBL7 147 aa8.59□□□□□ -1.03
CPSF7-206ENST00000448745 MRGBPQ9NV56 204 aa8.59□□□□□ -1.03
CPSF7-206ENST00000448745 DDX18Q9NVP1 670 aaKnown RBP8.59□□□□□ -1.03
CPSF7-206ENST00000448745 TMEM216Q9P0N5 145 aa8.59□□□□□ -1.03
CPSF7-206ENST00000448745 VTI1BQ9UEU0 232 aa8.59□□□□□ -1.03
CPSF7-206ENST00000448745 FAF1Q9UNN5 650 aaPredicted RBP8.59□□□□□ -1.03
CPSF7-206ENST00000448745 Q9Y3F1 56 aa8.59□□□□□ -1.03
CPSF7-206ENST00000448745 TNRC18O15417 2968 aaPredicted RBP8.58□□□□□ -1.04
CPSF7-206ENST00000448745 hCG_2014768A0A024R1R8 64 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 MYADML2A6NDP7 307 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 GAS2O43903 313 aaKnown RBP8.58□□□□□ -1.04
CPSF7-206ENST00000448745 MSCO60682 206 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 TRIM13O60858 407 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 ADAMTS4O75173 837 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 DUSP11O75319 330 aaKnown RBP8.58□□□□□ -1.04
CPSF7-206ENST00000448745 TADA2AO75478 443 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 KRT19P08727 400 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 XRCC1P18887 633 aaPredicted RBP8.58□□□□□ -1.04
CPSF7-206ENST00000448745 CDH2P19022 906 aaPredicted RBP8.58□□□□□ -1.04
CPSF7-206ENST00000448745 SLC5A2P31639 672 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 SPRP35270 261 aaPredicted RBP8.58□□□□□ -1.04
CPSF7-206ENST00000448745 PPARGP37231 505 aaPredicted RBP8.58□□□□□ -1.04
CPSF7-206ENST00000448745 ALDH3B2P48448 385 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 SCNN1BP51168 640 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 NUP107P57740 925 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 TXNL4AP83876 142 aaKnown RBP8.58□□□□□ -1.04
CPSF7-206ENST00000448745 ART3Q13508 389 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 PEX6Q13608 980 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 LAMC2Q13753 1193 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 FRG1Q14331 258 aaKnown RBP8.58□□□□□ -1.04
CPSF7-206ENST00000448745 TARBP2Q15633 366 aaKnown RBP8.58□□□□□ -1.04
CPSF7-206ENST00000448745 CDO1Q16878 200 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 SLC9B1Q4ZJI4 515 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 C6orf52Q5T4I8 152 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 IYDQ6PHW0 289 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 TLK2Q86UE8 772 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 TRIM50Q86XT4 487 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 CHERPQ8IWX8 916 aaKnown RBP8.58□□□□□ -1.04
CPSF7-206ENST00000448745 TRIML2Q8N7C3 387 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 CNTD1Q8N815 330 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 ZNF781Q8N8C0 355 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 FNDC8Q8TC99 324 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 HM13Q8TCT9 377 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 SEPT1Q8WYJ6 367 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 ABTB1Q969K4 478 aaPredicted RBP8.58□□□□□ -1.04
CPSF7-206ENST00000448745 FAM167AQ96KS9 214 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 SPATA33Q96N06 139 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 TSNARE1Q96NA8 513 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 LENG8Q96PV6 779 aaPredicted RBP8.58□□□□□ -1.04
CPSF7-206ENST00000448745 CDRT15Q96T59 188 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 PKP2Q99959 881 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 C16orf70Q9BSU1 422 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 OSBPL11Q9BXB4 747 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 UPF3AQ9H1J1 476 aaKnown RBP8.58□□□□□ -1.04
CPSF7-206ENST00000448745 RPF1Q9H9Y2 349 aaKnown RBP8.58□□□□□ -1.04
CPSF7-206ENST00000448745 EFCAB1Q9HAE3 211 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 NGRNQ9NPE2 291 aaKnown RBP8.58□□□□□ -1.04
CPSF7-206ENST00000448745 SNX15Q9NRS6 342 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 GPATCH2LQ9NWQ4 482 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 ZNHIT2Q9UHR6 403 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 ANKRD6Q9Y2G4 727 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 RAP2CQ9Y3L5 183 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 TANC1Q9C0D5 1861 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 SCN10AQ9Y5Y9 1956 aa8.58□□□□□ -1.04
CPSF7-206ENST00000448745 TTC36A6NLP5 189 aa8.57□□□□□ -1.04
CPSF7-206ENST00000448745 TRIM38O00635 465 aa8.57□□□□□ -1.04
CPSF7-206ENST00000448745 HDAC3O15379 428 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms