RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 Q6ZVU0 165 aa20.2■□□□□ 0.82
VCP-203ENST00000448530 PHLDB2Q86SQ0 1253 aa20.2■□□□□ 0.82
VCP-203ENST00000448530 ZNF683Q8IZ20 524 aa20.2■□□□□ 0.82
VCP-203ENST00000448530 AOPEPQ8N6M6 819 aa20.2■□□□□ 0.82
VCP-203ENST00000448530 ERGIC2Q96RQ1 377 aa20.2■□□□□ 0.82
VCP-203ENST00000448530 ACE2Q9BYF1 805 aaPredicted RBP20.2■□□□□ 0.82
VCP-203ENST00000448530 FNDC3AQ9Y2H6 1198 aaKnown RBP20.2■□□□□ 0.82
VCP-203ENST00000448530 SNX11Q9Y5W9 270 aa20.2■□□□□ 0.82
VCP-203ENST00000448530 DOCK4Q8N1I0 1966 aa20.19■□□□□ 0.82
VCP-203ENST00000448530 IGLV3-10A0A075B6K4 115 aa20.19■□□□□ 0.82
VCP-203ENST00000448530 TBC1D3DA0A087WVF3 549 aa20.19■□□□□ 0.82
VCP-203ENST00000448530 TBC1D3IA0A087WXS9 549 aa20.19■□□□□ 0.82
VCP-203ENST00000448530 TBC1D3EA0A087X179 549 aa20.19■□□□□ 0.82
VCP-203ENST00000448530 TBC1D3KA0A087X1G2 549 aa20.19■□□□□ 0.82
VCP-203ENST00000448530 TBC1D3FA6NER0 549 aaPredicted RBP20.19■□□□□ 0.82
VCP-203ENST00000448530 LRRC10BA6NIK2 292 aa20.19■□□□□ 0.82
VCP-203ENST00000448530 TBC1D3LB9A6J9 549 aa20.19■□□□□ 0.82
VCP-203ENST00000448530 MCF2LO15068 1137 aa20.19■□□□□ 0.82
VCP-203ENST00000448530 TBC1D3HP0C7X1 549 aa20.19■□□□□ 0.82
VCP-203ENST00000448530 SPINK2P20155 84 aa20.19■□□□□ 0.82
VCP-203ENST00000448530 ADPRHP54922 357 aa20.19■□□□□ 0.82
VCP-203ENST00000448530 FAM193AP78312 1265 aa20.19■□□□□ 0.82
VCP-203ENST00000448530 TYRO3Q06418 890 aa20.19■□□□□ 0.82
VCP-203ENST00000448530 TBC1D3GQ6DHY5 549 aa20.19■□□□□ 0.82
VCP-203ENST00000448530 TBC1D3CQ6IPX1 549 aa20.19■□□□□ 0.82
VCP-203ENST00000448530 TBC1D3Q8IZP1 549 aaPredicted RBP20.19■□□□□ 0.82
VCP-203ENST00000448530 DCAF4L2Q8NA75 395 aa20.19■□□□□ 0.82
VCP-203ENST00000448530 RXFP2Q8WXD0 754 aa20.19■□□□□ 0.82
VCP-203ENST00000448530 SPON2Q9BUD6 331 aa20.19■□□□□ 0.82
VCP-203ENST00000448530 SCNM1Q9BWG6 230 aa20.19■□□□□ 0.82
VCP-203ENST00000448530 ZYG11BQ9C0D3 744 aa20.19■□□□□ 0.82
VCP-203ENST00000448530 AASDHPPTQ9NRN7 309 aa20.19■□□□□ 0.82
VCP-203ENST00000448530 ADAM22Q9P0K1 906 aa20.19■□□□□ 0.82
VCP-203ENST00000448530 VPS51Q9UID3 782 aa20.19■□□□□ 0.82
VCP-203ENST00000448530 HS3ST2Q9Y278 367 aa20.19■□□□□ 0.82
VCP-203ENST00000448530 PCDHGB2Q9Y5G2 931 aa20.19■□□□□ 0.82
VCP-203ENST00000448530 PLXNA2O75051 1894 aa20.19■□□□□ 0.82
VCP-203ENST00000448530 TMEM131Q92545 1883 aa20.18■□□□□ 0.82
VCP-203ENST00000448530 CACNA1BQ00975 2339 aa20.18■□□□□ 0.82
VCP-203ENST00000448530 FLRT2O43155 660 aa20.18■□□□□ 0.82
VCP-203ENST00000448530 SLC7A4O43246 635 aa20.18■□□□□ 0.82
VCP-203ENST00000448530 SNAP91O60641 907 aa20.18■□□□□ 0.82
VCP-203ENST00000448530 ENDOD1O94919 500 aa20.18■□□□□ 0.82
VCP-203ENST00000448530 CALB1P05937 261 aa20.18■□□□□ 0.82
VCP-203ENST00000448530 CCDC172P0C7W6 258 aa20.18■□□□□ 0.82
VCP-203ENST00000448530 KRT3P12035 628 aa20.18■□□□□ 0.82
VCP-203ENST00000448530 SRCP12931 536 aa20.18■□□□□ 0.82
VCP-203ENST00000448530 SLC45A4Q5BKX6 768 aa20.18■□□□□ 0.82
VCP-203ENST00000448530 LAYNQ6UX15 382 aa20.18■□□□□ 0.82
VCP-203ENST00000448530 ZNF783Q6ZMS7 281 aa20.18■□□□□ 0.82
VCP-203ENST00000448530 BNIPLQ7Z465 357 aa20.18■□□□□ 0.82
VCP-203ENST00000448530 PIP4K2CQ8TBX8 421 aa20.18■□□□□ 0.82
VCP-203ENST00000448530 SLC6A18Q96N87 628 aa20.18■□□□□ 0.82
VCP-203ENST00000448530 PSMB7Q99436 277 aa20.18■□□□□ 0.82
VCP-203ENST00000448530 SELENOOQ9BVL4 669 aa20.18■□□□□ 0.82
VCP-203ENST00000448530 KDM4CQ9H3R0 1056 aa20.18■□□□□ 0.82
VCP-203ENST00000448530 ILVBLA1L0T0 632 aa20.17■□□□□ 0.82
VCP-203ENST00000448530 VILLO15195 856 aa20.17■□□□□ 0.82
VCP-203ENST00000448530 HYAL3O43820 417 aaPredicted RBP20.17■□□□□ 0.82
VCP-203ENST00000448530 DFNA5O60443 496 aa20.17■□□□□ 0.82
VCP-203ENST00000448530 TOP3BO95985 862 aaKnown RBP20.17■□□□□ 0.82
VCP-203ENST00000448530 MT-CO1P00395 513 aa20.17■□□□□ 0.82
VCP-203ENST00000448530 UNGP13051 313 aaPredicted RBP20.17■□□□□ 0.82
VCP-203ENST00000448530 DRD3P35462 400 aa20.17■□□□□ 0.82
VCP-203ENST00000448530 RECQLP46063 649 aaPredicted RBP20.17■□□□□ 0.82
VCP-203ENST00000448530 CCT8P50990 548 aa20.17■□□□□ 0.82
VCP-203ENST00000448530 CLCN6P51797 869 aa20.17■□□□□ 0.82
VCP-203ENST00000448530 CCDC15Q0P6D6 951 aa20.17■□□□□ 0.82
VCP-203ENST00000448530 NCAPHQ15003 741 aa20.17■□□□□ 0.82
VCP-203ENST00000448530 CLEC16AQ2KHT3 1053 aa20.17■□□□□ 0.82
VCP-203ENST00000448530 C15orf59Q2T9L4 293 aaPredicted RBP20.17■□□□□ 0.82
VCP-203ENST00000448530 POM121L1PQ3SYA9 428 aa20.17■□□□□ 0.82
VCP-203ENST00000448530 CCDC14Q49A88 953 aa20.17■□□□□ 0.82
VCP-203ENST00000448530 RETSATQ6NUM9 610 aa20.17■□□□□ 0.82
VCP-203ENST00000448530 STRADAQ7RTN6 431 aa20.17■□□□□ 0.82
VCP-203ENST00000448530 PRPF39Q86UA1 669 aaKnown RBP20.17■□□□□ 0.82
VCP-203ENST00000448530 RHBDD1Q8TEB9 315 aa20.17■□□□□ 0.82
VCP-203ENST00000448530 SERAC1Q96JX3 654 aa20.17■□□□□ 0.82
VCP-203ENST00000448530 ORAI3Q9BRQ5 295 aa20.17■□□□□ 0.82
VCP-203ENST00000448530 PCOLCE2Q9UKZ9 415 aa20.17■□□□□ 0.82
VCP-203ENST00000448530 SARDHQ9UL12 918 aa20.17■□□□□ 0.82
VCP-203ENST00000448530 PPM1HQ9ULR3 514 aa20.17■□□□□ 0.82
VCP-203ENST00000448530 WASF3Q9UPY6 502 aa20.17■□□□□ 0.82
VCP-203ENST00000448530 APOBEC2Q9Y235 224 aaKnown RBP20.17■□□□□ 0.82
VCP-203ENST00000448530 TP53BP1Q12888 1972 aaPredicted RBP20.16■□□□□ 0.82
VCP-203ENST00000448530 A0A0D9SEW6 157 aa20.16■□□□□ 0.82
VCP-203ENST00000448530 ANKRD62A6NC57 917 aa20.16■□□□□ 0.82
VCP-203ENST00000448530 C2CD4BA6NLJ0 364 aa20.16■□□□□ 0.82
VCP-203ENST00000448530 CBX4O00257 560 aa20.16■□□□□ 0.82
VCP-203ENST00000448530 PLK4O00444 970 aa20.16■□□□□ 0.82
VCP-203ENST00000448530 RTN2O75298 545 aa20.16■□□□□ 0.82
VCP-203ENST00000448530 RRM1P23921 792 aa20.16■□□□□ 0.82
VCP-203ENST00000448530 ADRA1BP35368 520 aa20.16■□□□□ 0.82
VCP-203ENST00000448530 CTSKP43235 329 aa20.16■□□□□ 0.82
VCP-203ENST00000448530 PTPN9P43378 593 aa20.16■□□□□ 0.82
VCP-203ENST00000448530 ANO6Q4KMQ2 910 aa20.16■□□□□ 0.82
VCP-203ENST00000448530 RWDD4Q6NW29 188 aaKnown RBP20.16■□□□□ 0.82
VCP-203ENST00000448530 UNQ6494/PRO21346Q6UXR6 183 aa20.16■□□□□ 0.82
VCP-203ENST00000448530 LINGO4Q6UY18 593 aa20.16■□□□□ 0.82
VCP-203ENST00000448530 PHF13Q86YI8 300 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms