RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 RAPGEF1Q13905 1077 aa29.04■■■□□ 2.24
CBX4-202ENST00000448310 C5orf22Q49AR2 442 aa29.04■■■□□ 2.24
CBX4-202ENST00000448310 VWA3BQ502W6 1294 aa29.04■■■□□ 2.24
CBX4-202ENST00000448310 ALFQ53S48 1182 aa29.04■■■□□ 2.24
CBX4-202ENST00000448310 MIIPQ5JXC2 388 aa29.04■■■□□ 2.24
CBX4-202ENST00000448310 AGBL4Q5VU57 503 aa29.04■■■□□ 2.24
CBX4-202ENST00000448310 FAM46CQ5VWP2 391 aa29.04■■■□□ 2.24
CBX4-202ENST00000448310 NAPEPLDQ6IQ20 393 aa29.04■■■□□ 2.24
CBX4-202ENST00000448310 SH2D3CQ8N5H7 860 aa29.04■■■□□ 2.24
CBX4-202ENST00000448310 PIP4K2CQ8TBX8 421 aa29.04■■■□□ 2.24
CBX4-202ENST00000448310 SAP25Q8TEE9 199 aa29.04■■■□□ 2.24
CBX4-202ENST00000448310 PDCL3Q9H2J4 239 aa29.04■■■□□ 2.24
CBX4-202ENST00000448310 WDCPQ9H6R7 721 aa29.04■■■□□ 2.24
CBX4-202ENST00000448310 TMPRSS4Q9NRS4 437 aa29.04■■■□□ 2.24
CBX4-202ENST00000448310 ARHGEF38Q9NXL2 777 aa29.04■■■□□ 2.24
CBX4-202ENST00000448310 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP29.04■■■□□ 2.243e-8■■■■□ 24.6
CBX4-202ENST00000448310 ARHGAP20Q9P2F6 1191 aa29.04■■■□□ 2.24
CBX4-202ENST00000448310 PPM1HQ9ULR3 514 aa29.04■■■□□ 2.24
CBX4-202ENST00000448310 TBC1D30Q9Y2I9 924 aa29.04■■■□□ 2.24
CBX4-202ENST00000448310 GPSM3Q9Y4H4 160 aa29.04■■■□□ 2.24
CBX4-202ENST00000448310 CELSR3Q9NYQ7 3312 aa29.03■■■□□ 2.24
CBX4-202ENST00000448310 DOCK4Q8N1I0 1966 aa29.03■■■□□ 2.24
CBX4-202ENST00000448310 SNAP91O60641 907 aa29.03■■■□□ 2.24
CBX4-202ENST00000448310 MT-CO1P00395 513 aa29.03■■■□□ 2.24
CBX4-202ENST00000448310 DRAP1Q14919 205 aaPredicted RBP29.03■■■□□ 2.24
CBX4-202ENST00000448310 DPCR1Q3MIW9 517 aa29.03■■■□□ 2.24
CBX4-202ENST00000448310 SLC45A4Q5BKX6 768 aa29.03■■■□□ 2.24
CBX4-202ENST00000448310 PRPF39Q86UA1 669 aaKnown RBP29.03■■■□□ 2.24
CBX4-202ENST00000448310 PSMB7Q99436 277 aa29.03■■■□□ 2.24
CBX4-202ENST00000448310 TUBGCP2Q9BSJ2 902 aa29.03■■■□□ 2.24
CBX4-202ENST00000448310 TPX2Q9ULW0 747 aaKnown RBP29.03■■■□□ 2.24
CBX4-202ENST00000448310 RAXQ9Y2V3 346 aa29.03■■■□□ 2.24
CBX4-202ENST00000448310 FHOD1Q9Y613 1164 aa29.03■■■□□ 2.24
CBX4-202ENST00000448310 KNTC1P50748 2209 aa29.03■■■□□ 2.24
CBX4-202ENST00000448310 ARID1BQ8NFD5 2236 aaPredicted RBP29.03■■■□□ 2.24
CBX4-202ENST00000448310 TRABD2BA6NFA1 517 aa29.02■■■□□ 2.24
CBX4-202ENST00000448310 C1QTNF3-AMACRE9PGA6 284 aa29.02■■■□□ 2.24
CBX4-202ENST00000448310 ENC1O14682 589 aa29.02■■■□□ 2.24
CBX4-202ENST00000448310 MCF2LO15068 1137 aa29.02■■■□□ 2.24
CBX4-202ENST00000448310 SLC7A4O43246 635 aa29.02■■■□□ 2.24
CBX4-202ENST00000448310 RHOCP08134 193 aa29.02■■■□□ 2.24
CBX4-202ENST00000448310 SRCP12931 536 aa29.02■■■□□ 2.24
CBX4-202ENST00000448310 EPHA8P29322 1005 aaPredicted RBP29.02■■■□□ 2.24
CBX4-202ENST00000448310 CXCR3P49682 368 aa29.02■■■□□ 2.24
CBX4-202ENST00000448310 BNIP3Q12983 259 aa29.02■■■□□ 2.24
CBX4-202ENST00000448310 DNAJC3Q13217 504 aa29.02■■■□□ 2.24
CBX4-202ENST00000448310 SMAD1Q15797 465 aaKnown RBP29.02■■■□□ 2.24
CBX4-202ENST00000448310 TAF3Q5VWG9 929 aa29.02■■■□□ 2.24
CBX4-202ENST00000448310 SPATS2Q86XZ4 545 aaKnown RBP29.02■■■□□ 2.24
CBX4-202ENST00000448310 ZDHHC17Q8IUH5 632 aa29.02■■■□□ 2.24
CBX4-202ENST00000448310 FAM114A1Q8IWE2 563 aa29.02■■■□□ 2.24
CBX4-202ENST00000448310 ZNF683Q8IZ20 524 aa29.02■■■□□ 2.24
CBX4-202ENST00000448310 EID2Q8N6I1 236 aa29.02■■■□□ 2.24
CBX4-202ENST00000448310 TMEM35BQ8NCS4 154 aa29.02■■■□□ 2.24
CBX4-202ENST00000448310 CNDP2Q96KP4 475 aaKnown RBP29.02■■■□□ 2.24
CBX4-202ENST00000448310 TBCBQ99426 244 aa29.02■■■□□ 2.24
CBX4-202ENST00000448310 KDM4CQ9H3R0 1056 aa29.02■■■□□ 2.24
CBX4-202ENST00000448310 CLSTN2Q9H4D0 955 aa29.02■■■□□ 2.24
CBX4-202ENST00000448310 STAP1Q9ULZ2 295 aa29.02■■■□□ 2.24
CBX4-202ENST00000448310 K7ERQ8 282 aa29.01■■■□□ 2.23
CBX4-202ENST00000448310 LDOC1O95751 146 aaPredicted RBP29.01■■■□□ 2.23
CBX4-202ENST00000448310 CYP11B1P15538 503 aa29.01■■■□□ 2.23
CBX4-202ENST00000448310 CLDN6P56747 220 aa29.01■■■□□ 2.23
CBX4-202ENST00000448310 BPIFB4P59827 614 aa29.01■■■□□ 2.23
CBX4-202ENST00000448310 DEUP1Q05D60 604 aa29.01■■■□□ 2.23
CBX4-202ENST00000448310 KCNMA1Q12791 1236 aa29.01■■■□□ 2.23
CBX4-202ENST00000448310 CAMK2BQ13554 666 aa29.01■■■□□ 2.23
CBX4-202ENST00000448310 C2CD6Q53TS8 623 aa29.01■■■□□ 2.23
CBX4-202ENST00000448310 BRMS1LQ5PSV4 323 aa29.01■■■□□ 2.23
CBX4-202ENST00000448310 FAM102AQ5T9C2 384 aaPredicted RBP29.01■■■□□ 2.23
CBX4-202ENST00000448310 SMYD5Q6GMV2 418 aa29.01■■■□□ 2.23
CBX4-202ENST00000448310 MFSD2AQ8NA29 543 aa29.01■■■□□ 2.23
CBX4-202ENST00000448310 RRN3Q9NYV6 651 aa29.01■■■□□ 2.23
CBX4-202ENST00000448310 CA5BQ9Y2D0 317 aa29.01■■■□□ 2.23
CBX4-202ENST00000448310 ATRXP46100 2492 aa29.01■■■□□ 2.23
CBX4-202ENST00000448310 URB1O60287 2271 aaKnown RBP29■■■□□ 2.23
CBX4-202ENST00000448310 ALOX15BO15296 676 aa29■■■□□ 2.23
CBX4-202ENST00000448310 CTSLP07711 333 aa29■■■□□ 2.23
CBX4-202ENST00000448310 CDH5P33151 784 aaPredicted RBP29■■■□□ 2.23
CBX4-202ENST00000448310 ARRB1P49407 418 aaPredicted RBP29■■■□□ 2.23
CBX4-202ENST00000448310 CYP4F3Q08477 520 aa29■■■□□ 2.23
CBX4-202ENST00000448310 ATP11CQ8NB49 1132 aa29■■■□□ 2.23
CBX4-202ENST00000448310 NT5C3BQ969T7 300 aa29■■■□□ 2.23
CBX4-202ENST00000448310 C18orf8Q96DM3 657 aa29■■■□□ 2.23
CBX4-202ENST00000448310 MPP6Q9NZW5 540 aa29■■■□□ 2.23
CBX4-202ENST00000448310 VPS51Q9UID3 782 aa29■■■□□ 2.23
CBX4-202ENST00000448310 HS3ST2Q9Y278 367 aa29■■■□□ 2.23
CBX4-202ENST00000448310 PES1O00541 588 aaKnown RBP28.99■■■□□ 2.23
CBX4-202ENST00000448310 YKT6O15498 198 aa28.99■■■□□ 2.23
CBX4-202ENST00000448310 RRM1P23921 792 aa28.99■■■□□ 2.23
CBX4-202ENST00000448310 TAS2R38P59533 333 aa28.99■■■□□ 2.23
CBX4-202ENST00000448310 KRT83P78385 493 aa28.99■■■□□ 2.23
CBX4-202ENST00000448310 TFAP2DQ7Z6R9 452 aa28.99■■■□□ 2.23
CBX4-202ENST00000448310 TRIM69Q86WT6 500 aa28.99■■■□□ 2.23
CBX4-202ENST00000448310 XYLT1Q86Y38 959 aa28.99■■■□□ 2.23
CBX4-202ENST00000448310 A0A0D9SEW6 157 aa28.98■■■□□ 2.23
CBX4-202ENST00000448310 GOLGA8SH3BPF8 625 aa28.98■■■□□ 2.23
CBX4-202ENST00000448310 SMAD6O43541 496 aaKnown RBP28.98■■■□□ 2.23
CBX4-202ENST00000448310 FLT3P36888 993 aa28.98■■■□□ 2.23
CBX4-202ENST00000448310 GABRB2P47870 512 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms