RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 SNX11Q9Y5W9 270 aa18.16■□□□□ 0.5
DDX56-207ENST00000448192 IGLV3-10A0A075B6K4 115 aa18.15■□□□□ 0.5
DDX56-207ENST00000448192 PLK4O00444 970 aa18.15■□□□□ 0.5
DDX56-207ENST00000448192 ENDOD1O94919 500 aa18.15■□□□□ 0.5
DDX56-207ENST00000448192 TOP3BO95985 862 aaKnown RBP18.15■□□□□ 0.5
DDX56-207ENST00000448192 MT-CO1P00395 513 aa18.15■□□□□ 0.5
DDX56-207ENST00000448192 SRCP12931 536 aa18.15■□□□□ 0.5
DDX56-207ENST00000448192 SPINK2P20155 84 aa18.15■□□□□ 0.5
DDX56-207ENST00000448192 GRIA4P48058 902 aa18.15■□□□□ 0.5
DDX56-207ENST00000448192 METAP1P53582 386 aa18.15■□□□□ 0.5
DDX56-207ENST00000448192 CLEC16AQ2KHT3 1053 aa18.15■□□□□ 0.5
DDX56-207ENST00000448192 KIF19Q2TAC6 998 aa18.15■□□□□ 0.5
DDX56-207ENST00000448192 POM121L1PQ3SYA9 428 aa18.15■□□□□ 0.5
DDX56-207ENST00000448192 CCDC14Q49A88 953 aa18.15■□□□□ 0.5
DDX56-207ENST00000448192 RAB6CQ53S08 254 aa18.15■□□□□ 0.5
DDX56-207ENST00000448192 C6orf118Q5T5N4 469 aa18.15■□□□□ 0.5
DDX56-207ENST00000448192 SETD7Q8WTS6 366 aaKnown RBP18.15■□□□□ 0.5
DDX56-207ENST00000448192 PSMB7Q99436 277 aa18.15■□□□□ 0.5
DDX56-207ENST00000448192 ORAI3Q9BRQ5 295 aa18.15■□□□□ 0.5
DDX56-207ENST00000448192 ZYG11BQ9C0D3 744 aa18.15■□□□□ 0.5
DDX56-207ENST00000448192 RAB6CQ9H0N0 254 aa18.15■□□□□ 0.5
DDX56-207ENST00000448192 TM7SF3Q9NS93 570 aa18.15■□□□□ 0.5
DDX56-207ENST00000448192 VPS51Q9UID3 782 aa18.15■□□□□ 0.5
DDX56-207ENST00000448192 SARDHQ9UL12 918 aa18.15■□□□□ 0.5
DDX56-207ENST00000448192 FNDC3AQ9Y2H6 1198 aaKnown RBP18.15■□□□□ 0.5
DDX56-207ENST00000448192 TBC1D3DA0A087WVF3 549 aa18.14■□□□□ 0.49
DDX56-207ENST00000448192 TBC1D3IA0A087WXS9 549 aa18.14■□□□□ 0.49
DDX56-207ENST00000448192 TBC1D3EA0A087X179 549 aa18.14■□□□□ 0.49
DDX56-207ENST00000448192 TBC1D3KA0A087X1G2 549 aa18.14■□□□□ 0.49
DDX56-207ENST00000448192 A0A0D9SEW6 157 aa18.14■□□□□ 0.49
DDX56-207ENST00000448192 A0A1W2PPC4 97 aa18.14■□□□□ 0.49
DDX56-207ENST00000448192 TBC1D3FA6NER0 549 aaPredicted RBP18.14■□□□□ 0.49
DDX56-207ENST00000448192 C2CD4BA6NLJ0 364 aa18.14■□□□□ 0.49
DDX56-207ENST00000448192 TBC1D3LB9A6J9 549 aa18.14■□□□□ 0.49
DDX56-207ENST00000448192 TBC1D3HP0C7X1 549 aa18.14■□□□□ 0.49
DDX56-207ENST00000448192 KRT3P12035 628 aa18.14■□□□□ 0.49
DDX56-207ENST00000448192 ADPRHP54922 357 aa18.14■□□□□ 0.49
DDX56-207ENST00000448192 PTP4A2Q12974 167 aa18.14■□□□□ 0.49
DDX56-207ENST00000448192 HNRNPDQ14103 355 aaKnown RBP18.14■□□□□ 0.49
DDX56-207ENST00000448192 TRIP6Q15654 476 aaKnown RBP18.14■□□□□ 0.49
DDX56-207ENST00000448192 ARL13BQ3SXY8 428 aa18.14■□□□□ 0.49
DDX56-207ENST00000448192 FAM46CQ5VWP2 391 aa18.14■□□□□ 0.49
DDX56-207ENST00000448192 TBC1D3GQ6DHY5 549 aa18.14■□□□□ 0.49
DDX56-207ENST00000448192 TBC1D3CQ6IPX1 549 aa18.14■□□□□ 0.49
DDX56-207ENST00000448192 LINGO4Q6UY18 593 aa18.14■□□□□ 0.49
DDX56-207ENST00000448192 TBC1D3Q8IZP1 549 aaPredicted RBP18.14■□□□□ 0.49
DDX56-207ENST00000448192 OR7D4Q8NG98 312 aa18.14■□□□□ 0.49
DDX56-207ENST00000448192 AGPAT1Q99943 283 aa18.14■□□□□ 0.49
DDX56-207ENST00000448192 SPON2Q9BUD6 331 aa18.14■□□□□ 0.49
DDX56-207ENST00000448192 SELENOOQ9BVL4 669 aa18.14■□□□□ 0.49
DDX56-207ENST00000448192 HS3ST2Q9Y278 367 aa18.14■□□□□ 0.49
DDX56-207ENST00000448192 CEP295Q9C0D2 2601 aa18.13■□□□□ 0.49
DDX56-207ENST00000448192 C1QTNF3-AMACRE9PGA6 284 aa18.13■□□□□ 0.49
DDX56-207ENST00000448192 K7ERQ8 282 aa18.13■□□□□ 0.49
DDX56-207ENST00000448192 KCNK3O14649 394 aa18.13■□□□□ 0.49
DDX56-207ENST00000448192 MCF2LO15068 1137 aa18.13■□□□□ 0.49
DDX56-207ENST00000448192 TEX33O43247 280 aa18.13■□□□□ 0.49
DDX56-207ENST00000448192 RTN2O75298 545 aa18.13■□□□□ 0.49
DDX56-207ENST00000448192 CALB1P05937 261 aa18.13■□□□□ 0.49
DDX56-207ENST00000448192 ZNF883P0CG24 379 aa18.13■□□□□ 0.49
DDX56-207ENST00000448192 RRM1P23921 792 aa18.13■□□□□ 0.49
DDX56-207ENST00000448192 ADRA1BP35368 520 aa18.13■□□□□ 0.49
DDX56-207ENST00000448192 DRD3P35462 400 aa18.13■□□□□ 0.49
DDX56-207ENST00000448192 C21orf59P57076 290 aa18.13■□□□□ 0.49
DDX56-207ENST00000448192 RACK1P63244 317 aaKnown RBP18.13■□□□□ 0.49
DDX56-207ENST00000448192 CAVIN1Q6NZI2 390 aaKnown RBP18.13■□□□□ 0.49
DDX56-207ENST00000448192 PHF13Q86YI8 300 aaPredicted RBP18.13■□□□□ 0.49
DDX56-207ENST00000448192 DRC7Q8IY82 874 aa18.13■□□□□ 0.49
DDX56-207ENST00000448192 DCAF4L2Q8NA75 395 aa18.13■□□□□ 0.49
DDX56-207ENST00000448192 PIP4K2CQ8TBX8 421 aa18.13■□□□□ 0.49
DDX56-207ENST00000448192 CCDC114Q96M63 670 aa18.13■□□□□ 0.49
DDX56-207ENST00000448192 SLC6A18Q96N87 628 aa18.13■□□□□ 0.49
DDX56-207ENST00000448192 SCNM1Q9BWG6 230 aa18.13■□□□□ 0.49
DDX56-207ENST00000448192 EBF2Q9HAK2 575 aa18.13■□□□□ 0.49
DDX56-207ENST00000448192 AASDHPPTQ9NRN7 309 aa18.13■□□□□ 0.49
DDX56-207ENST00000448192 OR12D3Q9UGF7 316 aa18.13■□□□□ 0.49
DDX56-207ENST00000448192 PPM1HQ9ULR3 514 aa18.13■□□□□ 0.49
DDX56-207ENST00000448192 FARP1Q9Y4F1 1045 aaPredicted RBP18.13■□□□□ 0.49
DDX56-207ENST00000448192 MAP1BP46821 2468 aaKnown RBP18.12■□□□□ 0.49
DDX56-207ENST00000448192 ILVBLA1L0T0 632 aa18.12■□□□□ 0.49
DDX56-207ENST00000448192 CBX4O00257 560 aa18.12■□□□□ 0.49
DDX56-207ENST00000448192 ALOX15BO15296 676 aa18.12■□□□□ 0.49
DDX56-207ENST00000448192 SMAD6O43541 496 aaKnown RBP18.12■□□□□ 0.49
DDX56-207ENST00000448192 FERP16591 822 aa18.12■□□□□ 0.49
DDX56-207ENST00000448192 GLDCP23378 1020 aa18.12■□□□□ 0.49
DDX56-207ENST00000448192 RFC1P35251 1148 aaPredicted RBP18.12■□□□□ 0.49
DDX56-207ENST00000448192 PTPN9P43378 593 aa18.12■□□□□ 0.49
DDX56-207ENST00000448192 CCR5P51681 352 aa18.12■□□□□ 0.49
DDX56-207ENST00000448192 CNTN1Q12860 1018 aa18.12■□□□□ 0.49
DDX56-207ENST00000448192 KCNT1Q5JUK3 1230 aa18.12■□□□□ 0.49
DDX56-207ENST00000448192 ARTNQ5T4W7 220 aa18.12■□□□□ 0.49
DDX56-207ENST00000448192 RWDD4Q6NW29 188 aaKnown RBP18.12■□□□□ 0.49
DDX56-207ENST00000448192 FAM172AQ8WUF8 416 aa18.12■□□□□ 0.49
DDX56-207ENST00000448192 BPIFA3Q9BQP9 254 aa18.12■□□□□ 0.49
DDX56-207ENST00000448192 ACE2Q9BYF1 805 aaPredicted RBP18.12■□□□□ 0.49
DDX56-207ENST00000448192 WASF3Q9UPY6 502 aa18.12■□□□□ 0.49
DDX56-207ENST00000448192 KNL1Q8NG31 2342 aa18.12■□□□□ 0.49
DDX56-207ENST00000448192 FRYQ5TBA9 3013 aa18.12■□□□□ 0.49
DDX56-207ENST00000448192 SMTNL1A8MU46 457 aa18.11■□□□□ 0.49
DDX56-207ENST00000448192 HYAL3O43820 417 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms