RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 ILKAPQ9H0C8 392 aaPredicted RBP13.16□□□□□ -0.3
SHC1-210ENST00000448116 VCX3BQ9H321 246 aa13.16□□□□□ -0.3
SHC1-210ENST00000448116 EIF2B3Q9NR50 452 aaKnown RBP13.16□□□□□ -0.3
SHC1-210ENST00000448116 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.16□□□□□ -0.3
SHC1-210ENST00000448116 BLOC1S6Q9UL45 172 aa13.16□□□□□ -0.3
SHC1-210ENST00000448116 TIMM13Q9Y5L4 95 aaPredicted RBP13.16□□□□□ -0.3
SHC1-210ENST00000448116 CAPN8A6NHC0 703 aa13.16□□□□□ -0.3
SHC1-210ENST00000448116 NRP1O14786 923 aa13.16□□□□□ -0.3
SHC1-210ENST00000448116 VCLP18206 1134 aa13.16□□□□□ -0.3
SHC1-210ENST00000448116 NFKB1P19838 968 aa13.16□□□□□ -0.3
SHC1-210ENST00000448116 TCN1P20061 433 aaPredicted RBP13.16□□□□□ -0.3
SHC1-210ENST00000448116 NAGLUP54802 743 aa13.16□□□□□ -0.3
SHC1-210ENST00000448116 NAB1Q13506 487 aa13.16□□□□□ -0.3
SHC1-210ENST00000448116 USP10Q14694 798 aaKnown RBP13.16□□□□□ -0.3
SHC1-210ENST00000448116 TMEM198Q66K66 360 aa13.16□□□□□ -0.3
SHC1-210ENST00000448116 PGM2L1Q6PCE3 622 aa13.16□□□□□ -0.3
SHC1-210ENST00000448116 OR6J1Q8NGC5 347 aa13.16□□□□□ -0.3
SHC1-210ENST00000448116 EDEM1Q92611 657 aa13.16□□□□□ -0.3
SHC1-210ENST00000448116 WNT8BQ93098 351 aa13.16□□□□□ -0.3
SHC1-210ENST00000448116 SGF29Q96ES7 293 aa13.16□□□□□ -0.3
SHC1-210ENST00000448116 KCNK16Q96T55 309 aa13.16□□□□□ -0.3
SHC1-210ENST00000448116 CDRT15Q96T59 188 aa13.16□□□□□ -0.3
SHC1-210ENST00000448116 ULBP1Q9BZM6 244 aa13.16□□□□□ -0.3
SHC1-210ENST00000448116 DDIT4Q9NX09 232 aa13.16□□□□□ -0.3
SHC1-210ENST00000448116 SNUPNO95149 360 aaKnown RBP13.15□□□□□ -0.3
SHC1-210ENST00000448116 PIGNO95427 931 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 NAT2P11245 290 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 MYL4P12829 197 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 NCAM1P13591 858 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 ADRA1BP35368 520 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 PDCD2Q16342 344 aaPredicted RBP13.15□□□□□ -0.3
SHC1-210ENST00000448116 WSCD1Q658N2 575 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 EPGNQ6UW88 154 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 PDZD4Q76G19 769 aaPredicted RBP13.15□□□□□ -0.3
SHC1-210ENST00000448116 DPP9Q86TI2 863 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 ICA1LQ8NDH6 482 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 RNF34Q969K3 372 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 VPS39Q96JC1 886 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 CATSPER2Q96P56 530 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 CHCHD3Q9NX63 227 aaKnown RBP13.15□□□□□ -0.3
SHC1-210ENST00000448116 INPP5FQ9Y2H2 1132 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 G3V2L1 256 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 XPO1O14980 1071 aaKnown RBP13.15□□□□□ -0.3
SHC1-210ENST00000448116 CD4P01730 458 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 UQCRBP14927 111 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 NMBRP28336 390 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 CDK7P50613 346 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 MSLNQ13421 630 aaPredicted RBP13.15□□□□□ -0.3
SHC1-210ENST00000448116 GRM3Q14832 879 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 OTUD1Q5VV17 481 aaPredicted RBP13.15□□□□□ -0.3
SHC1-210ENST00000448116 ZNF410Q86VK4 478 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 SPNS2Q8IVW8 549 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 ZNF560Q96MR9 790 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 ACE2Q9BYF1 805 aaPredicted RBP13.15□□□□□ -0.3
SHC1-210ENST00000448116 IGSF9Q9P2J2 1179 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 RUVBL2Q9Y230 463 aaKnown RBP13.15□□□□□ -0.3
SHC1-210ENST00000448116 AP2A1O95782 977 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 CYP2C9P11712 490 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 PIK3R1P27986 724 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 GRIA4P48058 902 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 CCNA1P78396 465 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 MRPS22P82650 360 aaKnown RBP13.15□□□□□ -0.3
SHC1-210ENST00000448116 NLGN2Q8NFZ4 835 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 DNAJB3Q8WWF6 145 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 JADE3Q92613 823 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 NPY6RQ99463 290 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 CENPKQ9BS16 269 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 DUSP16Q9BY84 665 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 DNAI2Q9GZS0 605 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 FAM124BQ9H5Z6 455 aaPredicted RBP13.15□□□□□ -0.3
SHC1-210ENST00000448116 ANLNQ9NQW6 1124 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 RCOR3Q9P2K3 495 aaPredicted RBP13.15□□□□□ -0.3
SHC1-210ENST00000448116 DERAQ9Y315 318 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 DTNAQ9Y4J8 743 aa13.15□□□□□ -0.3
SHC1-210ENST00000448116 ZCWPW2A0A1B0GU75 182 aa13.14□□□□□ -0.31
SHC1-210ENST00000448116 YJEFN3A6XGL0 299 aa13.14□□□□□ -0.31
SHC1-210ENST00000448116 DYNC1LI2O43237 492 aaPredicted RBP13.14□□□□□ -0.31
SHC1-210ENST00000448116 DAB1O75553 588 aa13.14□□□□□ -0.31
SHC1-210ENST00000448116 PGM3O95394 542 aa13.14□□□□□ -0.31
SHC1-210ENST00000448116 NPR3P17342 541 aa13.14□□□□□ -0.31
SHC1-210ENST00000448116 PTPN1P18031 435 aaKnown RBP13.14□□□□□ -0.31
SHC1-210ENST00000448116 TPP2P29144 1249 aaPredicted RBP13.14□□□□□ -0.31
SHC1-210ENST00000448116 LIN52Q52LA3 116 aa13.14□□□□□ -0.31
SHC1-210ENST00000448116 ARL13AQ5H913 290 aaPredicted RBP13.14□□□□□ -0.31
SHC1-210ENST00000448116 MAMDC4Q6UXC1 1216 aa13.14□□□□□ -0.31
SHC1-210ENST00000448116 ACAD11Q709F0 780 aa13.14□□□□□ -0.31
SHC1-210ENST00000448116 MFN1Q8IWA4 741 aa13.14□□□□□ -0.31
SHC1-210ENST00000448116 NPWQ8N729 165 aa13.14□□□□□ -0.31
SHC1-210ENST00000448116 KCTD4Q8WVF5 259 aa13.14□□□□□ -0.31
SHC1-210ENST00000448116 OMDQ99983 421 aa13.14□□□□□ -0.31
SHC1-210ENST00000448116 TNS1Q9HBL0 1735 aaKnown RBP13.14□□□□□ -0.31
SHC1-210ENST00000448116 PIRO00625 290 aa13.14□□□□□ -0.31
SHC1-210ENST00000448116 USP17L7P0C7H9 530 aa13.14□□□□□ -0.31
SHC1-210ENST00000448116 SRGAP2BP0DMP2 458 aa13.14□□□□□ -0.31
SHC1-210ENST00000448116 ZBTB17Q13105 803 aa13.14□□□□□ -0.31
SHC1-210ENST00000448116 ZNF460Q14592 562 aa13.14□□□□□ -0.31
SHC1-210ENST00000448116 CNPY1Q3B7I2 92 aa13.14□□□□□ -0.31
SHC1-210ENST00000448116 LSM12Q3MHD2 195 aaKnown RBP13.14□□□□□ -0.31
SHC1-210ENST00000448116 SEL1L3Q68CR1 1132 aa13.14□□□□□ -0.31
SHC1-210ENST00000448116 OTOP3Q7RTS5 596 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms