RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 PRICKLE2Q7Z3G6 844 aa12.85□□□□□ -0.35
SSR4-205ENST00000447375 ZNF248Q8NDW4 579 aa12.85□□□□□ -0.35
SSR4-205ENST00000447375 TTC9Q92623 222 aa12.85□□□□□ -0.35
SSR4-205ENST00000447375 PRCCQ92733 491 aaPredicted RBP12.85□□□□□ -0.35
SSR4-205ENST00000447375 NPY6RQ99463 290 aa12.85□□□□□ -0.35
SSR4-205ENST00000447375 PCED1AQ9H1Q7 454 aa12.85□□□□□ -0.35
SSR4-205ENST00000447375 TM9SF3Q9HD45 589 aa12.85□□□□□ -0.35
SSR4-205ENST00000447375 OSGEPQ9NPF4 335 aa12.85□□□□□ -0.35
SSR4-205ENST00000447375 TMEM51Q9NW97 253 aa12.85□□□□□ -0.35
SSR4-205ENST00000447375 DDIT4Q9NX09 232 aa12.85□□□□□ -0.35
SSR4-205ENST00000447375 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.85□□□□□ -0.35
SSR4-205ENST00000447375 ADAM22Q9P0K1 906 aa12.85□□□□□ -0.35
SSR4-205ENST00000447375 SPTA1P02549 2419 aa12.85□□□□□ -0.35
SSR4-205ENST00000447375 ITIH6Q6UXX5 1313 aa12.85□□□□□ -0.35
SSR4-205ENST00000447375 COL12A1Q99715 3063 aa12.84□□□□□ -0.35
SSR4-205ENST00000447375 FAM170AA1A519 330 aa12.84□□□□□ -0.35
SSR4-205ENST00000447375 KCNU1A8MYU2 1149 aa12.84□□□□□ -0.35
SSR4-205ENST00000447375 GOLGA8SH3BPF8 625 aa12.84□□□□□ -0.35
SSR4-205ENST00000447375 CBX4O00257 560 aa12.84□□□□□ -0.35
SSR4-205ENST00000447375 IGLV3-19P01714 112 aa12.84□□□□□ -0.35
SSR4-205ENST00000447375 CYBBP04839 570 aa12.84□□□□□ -0.35
SSR4-205ENST00000447375 GYPCP04921 128 aa12.84□□□□□ -0.35
SSR4-205ENST00000447375 SLC2A3P11169 496 aa12.84□□□□□ -0.35
SSR4-205ENST00000447375 KRT10P13645 584 aa12.84□□□□□ -0.35
SSR4-205ENST00000447375 CTSKP43235 329 aa12.84□□□□□ -0.35
SSR4-205ENST00000447375 DGKGP49619 791 aa12.84□□□□□ -0.35
SSR4-205ENST00000447375 GSCP56915 257 aaPredicted RBP12.84□□□□□ -0.35
SSR4-205ENST00000447375 C1QBPQ07021 282 aaKnown RBP12.84□□□□□ -0.35
SSR4-205ENST00000447375 SLC25A52Q3SY17 297 aa12.84□□□□□ -0.35
SSR4-205ENST00000447375 MPPE1Q53F39 396 aa12.84□□□□□ -0.35
SSR4-205ENST00000447375 ZC3H12AQ5D1E8 599 aaKnown RBP12.84□□□□□ -0.35
SSR4-205ENST00000447375 KCNT1Q5JUK3 1230 aa12.84□□□□□ -0.35
SSR4-205ENST00000447375 MPP7Q5T2T1 576 aa12.84□□□□□ -0.35
SSR4-205ENST00000447375 PIK3R6Q5UE93 754 aa12.84□□□□□ -0.35
SSR4-205ENST00000447375 ACAD10Q6JQN1 1059 aa12.84□□□□□ -0.35
SSR4-205ENST00000447375 LAYNQ6UX15 382 aa12.84□□□□□ -0.35
SSR4-205ENST00000447375 ZNF571Q7Z3V5 609 aaPredicted RBP12.84□□□□□ -0.35
SSR4-205ENST00000447375 FAM124AQ86V42 546 aa12.84□□□□□ -0.35
SSR4-205ENST00000447375 GATAD2AQ86YP4 633 aa12.84□□□□□ -0.35
SSR4-205ENST00000447375 TMA16Q96EY4 203 aaKnown RBP12.84□□□□□ -0.35
SSR4-205ENST00000447375 PGAP3Q96FM1 320 aaPredicted RBP12.84□□□□□ -0.35
SSR4-205ENST00000447375 DDX50Q9BQ39 737 aaKnown RBP12.84□□□□□ -0.35
SSR4-205ENST00000447375 C11orf70Q9BRQ4 267 aa12.84□□□□□ -0.35
SSR4-205ENST00000447375 SLC2A11Q9BYW1 496 aa12.84□□□□□ -0.35
SSR4-205ENST00000447375 HAUS4Q9H6D7 363 aa12.84□□□□□ -0.35
SSR4-205ENST00000447375 C6orf106Q9H6K1 298 aaPredicted RBP12.84□□□□□ -0.35
SSR4-205ENST00000447375 FAM204AQ9H8W3 233 aa12.84□□□□□ -0.35
SSR4-205ENST00000447375 SEPT11Q9NVA2 429 aaKnown RBP12.84□□□□□ -0.35
SSR4-205ENST00000447375 PLK2Q9NYY3 685 aa12.84□□□□□ -0.35
SSR4-205ENST00000447375 LUC7L2Q9Y383 392 aaKnown RBP12.84□□□□□ -0.35
SSR4-205ENST00000447375 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.84□□□□□ -0.35
SSR4-205ENST00000447375 BZW2Q9Y6E2 419 aaKnown RBP12.84□□□□□ -0.35
SSR4-205ENST00000447375 NYNRINQ9P2P1 1898 aaKnown RBP12.83□□□□□ -0.36
SSR4-205ENST00000447375 GOLGA6L7A0A1B0GV03 622 aa12.83□□□□□ -0.36
SSR4-205ENST00000447375 M0QYT0 321 aa12.83□□□□□ -0.36
SSR4-205ENST00000447375 DFNA5O60443 496 aa12.83□□□□□ -0.36
SSR4-205ENST00000447375 SYNCRIPO60506 623 aaKnown RBP12.83□□□□□ -0.36
SSR4-205ENST00000447375 TSPAN3O60637 253 aa12.83□□□□□ -0.36
SSR4-205ENST00000447375 F9P00740 461 aa12.83□□□□□ -0.36
SSR4-205ENST00000447375 APOEP02649 317 aa12.83□□□□□ -0.36
SSR4-205ENST00000447375 CALB1P05937 261 aa12.83□□□□□ -0.36
SSR4-205ENST00000447375 GZMAP12544 262 aa12.83□□□□□ -0.36
SSR4-205ENST00000447375 SKILP12757 684 aa12.83□□□□□ -0.36
SSR4-205ENST00000447375 SLC6A4P31645 630 aa12.83□□□□□ -0.36
SSR4-205ENST00000447375 CCR1P32246 355 aa12.83□□□□□ -0.36
SSR4-205ENST00000447375 FLT3P36888 993 aa12.83□□□□□ -0.36
SSR4-205ENST00000447375 ACADVLP49748 655 aa12.83□□□□□ -0.36
SSR4-205ENST00000447375 KLHL30Q0D2K2 578 aa12.83□□□□□ -0.36
SSR4-205ENST00000447375 MTA1Q13330 715 aa12.83□□□□□ -0.36
SSR4-205ENST00000447375 OTUD1Q5VV17 481 aaPredicted RBP12.83□□□□□ -0.36
SSR4-205ENST00000447375 HGSNATQ68CP4 663 aa12.83□□□□□ -0.36
SSR4-205ENST00000447375 SPECC1LQ69YQ0 1117 aa12.83□□□□□ -0.36
SSR4-205ENST00000447375 NADSYN1Q6IA69 706 aa12.83□□□□□ -0.36
SSR4-205ENST00000447375 TRNP1Q6NT89 227 aa12.83□□□□□ -0.36
SSR4-205ENST00000447375 PPP1R2P3Q6NXS1 205 aa12.83□□□□□ -0.36
SSR4-205ENST00000447375 MON1BQ7L1V2 547 aa12.83□□□□□ -0.36
SSR4-205ENST00000447375 BNIPLQ7Z465 357 aa12.83□□□□□ -0.36
SSR4-205ENST00000447375 ADAT2Q7Z6V5 191 aaKnown RBP12.83□□□□□ -0.36
SSR4-205ENST00000447375 DDI1Q8WTU0 396 aa12.83□□□□□ -0.36
SSR4-205ENST00000447375 CPLX3Q8WVH0 158 aa12.83□□□□□ -0.36
SSR4-205ENST00000447375 BHMTQ93088 406 aa12.83□□□□□ -0.36
SSR4-205ENST00000447375 VCPIP1Q96JH7 1222 aa12.83□□□□□ -0.36
SSR4-205ENST00000447375 BTN2A3PQ96KV6 586 aa12.83□□□□□ -0.36
SSR4-205ENST00000447375 SLC12A6Q9UHW9 1150 aa12.83□□□□□ -0.36
SSR4-205ENST00000447375 STAP1Q9ULZ2 295 aa12.83□□□□□ -0.36
SSR4-205ENST00000447375 SLC27A6Q9Y2P4 619 aa12.83□□□□□ -0.36
SSR4-205ENST00000447375 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.83□□□□□ -0.36
SSR4-205ENST00000447375 CABIN1Q9Y6J0 2220 aa12.82□□□□□ -0.36
SSR4-205ENST00000447375 PIEZO2Q9H5I5 2752 aa12.82□□□□□ -0.36
SSR4-205ENST00000447375 A0A1B0GTQ1 180 aa12.82□□□□□ -0.36
SSR4-205ENST00000447375 TCRBV5S1A1TA0A578 114 aa12.82□□□□□ -0.36
SSR4-205ENST00000447375 SIGLEC16A6NMB1 481 aa12.82□□□□□ -0.36
SSR4-205ENST00000447375 DDX3XO00571 662 aaKnown RBP eCLIP12.82□□□□□ -0.36
SSR4-205ENST00000447375 ENDOD1O94919 500 aa12.82□□□□□ -0.36
SSR4-205ENST00000447375 ITGAVP06756 1048 aa12.82□□□□□ -0.36
SSR4-205ENST00000447375 TFE3P19532 575 aaPredicted RBP12.82□□□□□ -0.36
SSR4-205ENST00000447375 GLDCP23378 1020 aa12.82□□□□□ -0.36
SSR4-205ENST00000447375 HOXD9P28356 352 aaPredicted RBP12.82□□□□□ -0.36
SSR4-205ENST00000447375 HNRNPH3P31942 346 aaKnown RBP12.82□□□□□ -0.36
SSR4-205ENST00000447375 CXCR3P49682 368 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms