RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 POMZP3Q6PJE2 187 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 CRTC1Q6UUV9 634 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 SRGAP1Q7Z6B7 1085 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 DCP2Q8IU60 420 aaKnown RBP5.33□□□□□ -1.56
SDCBP-205ENST00000447267 ERC1Q8IUD2 1116 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 CHPFQ8IZ52 775 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 KBTBD3Q8NAB2 608 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 RCBTB1Q8NDN9 531 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 STKLD1Q8NE28 680 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 WDR36Q8NI36 951 aaKnown RBP5.33□□□□□ -1.56
SDCBP-205ENST00000447267 SH3RF2Q8TEC5 729 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 PRPF31Q8WWY3 499 aaKnown RBP5.33□□□□□ -1.56
SDCBP-205ENST00000447267 BIRC7Q96CA5 298 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 GPATCH3Q96I76 525 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 CCDC136Q96JN2 1154 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 FAM167AQ96KS9 214 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 GCNAQ96QF7 691 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 RIOX1Q9H6W3 641 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 KIF9Q9HAQ2 790 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 TRPC7Q9HCX4 862 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 RRN3Q9NYV6 651 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 RPH3AQ9Y2J0 694 aaPredicted RBP5.33□□□□□ -1.56
SDCBP-205ENST00000447267 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.33□□□□□ -1.56
SDCBP-205ENST00000447267 PCDHA10Q9Y5I2 948 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 X6R8D5 127 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 FLNAP21333 2647 aaKnown RBP5.33□□□□□ -1.56
SDCBP-205ENST00000447267 HEATR9A2RTY3 570 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 WNT9AO14904 365 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 GRID2O43424 1007 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 NFATC1O95644 943 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 ITGA2BP08514 1039 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 LIPCP11150 499 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 TRIM27P14373 513 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 ATP2B1P20020 1258 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 ACSL1P33121 698 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 ECI1P42126 302 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 DDX10Q13206 875 aaKnown RBP5.32□□□□□ -1.56
SDCBP-205ENST00000447267 DHCR24Q15392 516 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 TAF12Q16514 161 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 UPP1Q16831 310 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 CEP55Q53EZ4 464 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 C10orf76Q5T2E6 689 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 CENPPQ6IPU0 288 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 SDE2Q6IQ49 451 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 NOTUMQ6P988 496 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 RHBDF2Q6PJF5 856 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 ETV3LQ6ZN32 361 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 TRMT11Q7Z4G4 463 aaKnown RBP5.32□□□□□ -1.56
SDCBP-205ENST00000447267 MON1AQ86VX9 555 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 TGIF2LYQ8IUE0 185 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 HACE1Q8IYU2 909 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 BEST2Q8NFU1 509 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 MAPK15Q8TD08 544 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 ARHGAP45Q92619 1136 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 TMEM143Q96AN5 459 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 P2RY11Q96G91 374 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 ORAI3Q9BRQ5 295 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 NUP58Q9BVL2 599 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 ACE2Q9BYF1 805 aaPredicted RBP5.32□□□□□ -1.56
SDCBP-205ENST00000447267 CDIP1Q9H305 208 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 ACTR10Q9NZ32 417 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 SEPT10Q9P0V9 454 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 NTMQ9P121 344 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 MAFFQ9ULX9 164 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 NEU2Q9Y3R4 380 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 ASB3Q9Y575 518 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 TIMM13Q9Y5L4 95 aaPredicted RBP5.32□□□□□ -1.56
SDCBP-205ENST00000447267 COL4A3BPQ9Y5P4 624 aa5.32□□□□□ -1.56
SDCBP-205ENST00000447267 TDRD15B5MCY1 1934 aaKnown RBP5.32□□□□□ -1.56
SDCBP-205ENST00000447267 NUP210Q8TEM1 1887 aaPredicted RBP5.32□□□□□ -1.56
SDCBP-205ENST00000447267 TMEM189-UBE2V1I3L0A0 370 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 VILLO15195 856 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 NKX2-8O15522 239 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 STBD1O95210 358 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 ITGB3P05106 788 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 ARF4P18085 180 aaPredicted RBP5.31□□□□□ -1.56
SDCBP-205ENST00000447267 DDX6P26196 483 aaKnown RBP eCLIP5.31□□□□□ -1.56
SDCBP-205ENST00000447267 RPL13P26373 211 aaKnown RBP5.31□□□□□ -1.56
SDCBP-205ENST00000447267 OXTRP30559 389 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 LEPRP48357 1165 aaKnown RBP5.31□□□□□ -1.56
SDCBP-205ENST00000447267 GFRA1P56159 465 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 RPL11P62913 178 aaKnown RBP5.31□□□□□ -1.56
SDCBP-205ENST00000447267 ZXDBP98169 803 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 ATP2C1P98194 919 aaPredicted RBP5.31□□□□□ -1.56
SDCBP-205ENST00000447267 RUNX1T1Q06455 604 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 LAMTOR4Q0VGL1 99 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 FOXD4Q12950 439 aaPredicted RBP5.31□□□□□ -1.56
SDCBP-205ENST00000447267 TRAF1Q13077 416 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 ADAM9Q13443 819 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 ZNF268Q14587 947 aaPredicted RBP5.31□□□□□ -1.56
SDCBP-205ENST00000447267 INPP5JQ15735 1006 aaPredicted RBP5.31□□□□□ -1.56
SDCBP-205ENST00000447267 FUT11Q495W5 492 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 SPATS1Q496A3 300 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 C14orf28Q4W4Y0 310 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 ZNF280DQ6N043 979 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 CEP85Q6P2H3 762 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 CD300LDQ6UXZ3 194 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 ASB18Q6ZVZ8 466 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 MILR1Q7Z6M3 343 aa5.31□□□□□ -1.56
SDCBP-205ENST00000447267 FILIP1Q7Z7B0 1213 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms