RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 AKR1B15C9JRZ8 316 aaPredicted RBP15.19■□□□□ 0.02
HDAC4-204ENST00000446876 CBX4O00257 560 aa15.19■□□□□ 0.02
HDAC4-204ENST00000446876 SMAD6O43541 496 aaKnown RBP15.19■□□□□ 0.02
HDAC4-204ENST00000446876 ATP9BO43861 1147 aa15.19■□□□□ 0.02
HDAC4-204ENST00000446876 AKR1B10O60218 316 aa15.19■□□□□ 0.02
HDAC4-204ENST00000446876 BNIP3LO60238 219 aa15.19■□□□□ 0.02
HDAC4-204ENST00000446876 RNF8O76064 485 aa15.19■□□□□ 0.02
HDAC4-204ENST00000446876 EPHB2P29323 1055 aa15.19■□□□□ 0.02
HDAC4-204ENST00000446876 CD6P30203 668 aa15.19■□□□□ 0.02
HDAC4-204ENST00000446876 NNMTP40261 264 aa15.19■□□□□ 0.02
HDAC4-204ENST00000446876 PSMD8P48556 350 aa15.19■□□□□ 0.02
HDAC4-204ENST00000446876 MAPKAPK2P49137 400 aa15.19■□□□□ 0.02
HDAC4-204ENST00000446876 KRT83P78385 493 aa15.19■□□□□ 0.02
HDAC4-204ENST00000446876 DLG2Q15700 870 aa15.19■□□□□ 0.02
HDAC4-204ENST00000446876 TSR1Q2NL82 804 aaKnown RBP15.19■□□□□ 0.02
HDAC4-204ENST00000446876 SLC36A4Q6YBV0 504 aa15.19■□□□□ 0.02
HDAC4-204ENST00000446876 CPNE8Q86YQ8 564 aa15.19■□□□□ 0.02
HDAC4-204ENST00000446876 MMAAQ8IVH4 418 aaKnown RBP15.19■□□□□ 0.02
HDAC4-204ENST00000446876 SLC41A1Q8IVJ1 513 aa15.19■□□□□ 0.02
HDAC4-204ENST00000446876 SH2D3CQ8N5H7 860 aa15.19■□□□□ 0.02
HDAC4-204ENST00000446876 PIGKQ92643 395 aa15.19■□□□□ 0.02
HDAC4-204ENST00000446876 HSPA12BQ96MM6 686 aa15.19■□□□□ 0.02
HDAC4-204ENST00000446876 KCTD15Q96SI1 283 aaPredicted RBP15.19■□□□□ 0.02
HDAC4-204ENST00000446876 FAM129BQ96TA1 746 aa15.19■□□□□ 0.02
HDAC4-204ENST00000446876 EPAS1Q99814 870 aa15.19■□□□□ 0.02
HDAC4-204ENST00000446876 GPR174Q9BXC1 333 aa15.19■□□□□ 0.02
HDAC4-204ENST00000446876 DHX35Q9H5Z1 703 aaKnown RBP15.19■□□□□ 0.02
HDAC4-204ENST00000446876 FBRSQ9HAH7 460 aa15.19■□□□□ 0.02
HDAC4-204ENST00000446876 WSB2Q9NYS7 404 aaPredicted RBP15.19■□□□□ 0.02
HDAC4-204ENST00000446876 SERGEFQ9UGK8 458 aa15.19■□□□□ 0.02
HDAC4-204ENST00000446876 ADAMTS9Q9P2N4 1935 aa15.18■□□□□ 0.02
HDAC4-204ENST00000446876 SSU72P8A0A1W2PR75 194 aa15.18■□□□□ 0.02
HDAC4-204ENST00000446876 PATE3B3GLJ2 98 aa15.18■□□□□ 0.02
HDAC4-204ENST00000446876 MID1O15344 667 aa15.18■□□□□ 0.02
HDAC4-204ENST00000446876 PRPSAP2O60256 369 aa15.18■□□□□ 0.02
HDAC4-204ENST00000446876 NDUFS2O75306 463 aa15.18■□□□□ 0.02
HDAC4-204ENST00000446876 ZMPSTE24O75844 475 aa15.18■□□□□ 0.02
HDAC4-204ENST00000446876 DNTTP04053 509 aa15.18■□□□□ 0.02
HDAC4-204ENST00000446876 ITPKAP23677 461 aa15.18■□□□□ 0.02
HDAC4-204ENST00000446876 IL1R2P27930 398 aa15.18■□□□□ 0.02
HDAC4-204ENST00000446876 METAP1P53582 386 aa15.18■□□□□ 0.02
HDAC4-204ENST00000446876 AIF1P55008 147 aa15.18■□□□□ 0.02
HDAC4-204ENST00000446876 TPI1P60174 286 aa15.18■□□□□ 0.02
HDAC4-204ENST00000446876 ARF5P84085 180 aa15.18■□□□□ 0.02
HDAC4-204ENST00000446876 CSRP2Q16527 193 aa15.18■□□□□ 0.02
HDAC4-204ENST00000446876 SMTNL2Q2TAL5 461 aa15.18■□□□□ 0.02
HDAC4-204ENST00000446876 PLA2G2CQ5R387 149 aa15.18■□□□□ 0.02
HDAC4-204ENST00000446876 ERMARDQ5T6L9 678 aa15.18■□□□□ 0.02
HDAC4-204ENST00000446876 LYSMD4Q5XG99 296 aa15.18■□□□□ 0.02
HDAC4-204ENST00000446876 IL31Q6EBC2 164 aa15.18■□□□□ 0.02
HDAC4-204ENST00000446876 ZNF783Q6ZMS7 281 aa15.18■□□□□ 0.02
HDAC4-204ENST00000446876 LEKR1Q6ZMV7 388 aa15.18■□□□□ 0.02
HDAC4-204ENST00000446876 PRR23CQ6ZRP0 262 aa15.18■□□□□ 0.02
HDAC4-204ENST00000446876 CNGA4Q8IV77 575 aa15.18■□□□□ 0.02
HDAC4-204ENST00000446876 RTL3Q8N8U3 475 aaKnown RBP15.18■□□□□ 0.02
HDAC4-204ENST00000446876 TC2NQ8N9U0 490 aa15.18■□□□□ 0.02
HDAC4-204ENST00000446876 ATP11CQ8NB49 1132 aa15.18■□□□□ 0.02
HDAC4-204ENST00000446876 ARHGEF2Q92974 986 aaKnown RBP15.18■□□□□ 0.02
HDAC4-204ENST00000446876 PABPC3Q9H361 631 aaKnown RBP15.18■□□□□ 0.02
HDAC4-204ENST00000446876 NOL6Q9H6R4 1146 aaKnown RBP15.18■□□□□ 0.02
HDAC4-204ENST00000446876 NHEJ1Q9H9Q4 299 aaPredicted RBP15.18■□□□□ 0.02
HDAC4-204ENST00000446876 RXFP3Q9NSD7 469 aa15.18■□□□□ 0.02
HDAC4-204ENST00000446876 TMEM74BQ9NUR3 256 aa15.18■□□□□ 0.02
HDAC4-204ENST00000446876 HS3ST2Q9Y278 367 aa15.18■□□□□ 0.02
HDAC4-204ENST00000446876 PCDHGA5Q9Y5G8 931 aa15.18■□□□□ 0.02
HDAC4-204ENST00000446876 PI4KAP42356 2102 aa15.17■□□□□ 0.02
HDAC4-204ENST00000446876 RAMP2O60895 175 aa15.17■□□□□ 0.02
HDAC4-204ENST00000446876 LRP3O75074 770 aa15.17■□□□□ 0.02
HDAC4-204ENST00000446876 IGLV3-19P01714 112 aa15.17■□□□□ 0.02
HDAC4-204ENST00000446876 C7P10643 843 aa15.17■□□□□ 0.02
HDAC4-204ENST00000446876 ACSL1P33121 698 aa15.17■□□□□ 0.02
HDAC4-204ENST00000446876 VASPP50552 380 aaPredicted RBP15.17■□□□□ 0.02
HDAC4-204ENST00000446876 ZNF33AQ06730 810 aa15.17■□□□□ 0.02
HDAC4-204ENST00000446876 CST6Q15828 149 aa15.17■□□□□ 0.02
HDAC4-204ENST00000446876 POM121L1PQ3SYA9 428 aa15.17■□□□□ 0.02
HDAC4-204ENST00000446876 PPP6R3Q5H9R7 873 aaPredicted RBP15.17■□□□□ 0.02
HDAC4-204ENST00000446876 KCNT1Q5JUK3 1230 aa15.17■□□□□ 0.02
HDAC4-204ENST00000446876 TXNRD3NBQ6F5E7 133 aa15.17■□□□□ 0.02
HDAC4-204ENST00000446876 NETO2Q8NC67 525 aa15.17■□□□□ 0.02
HDAC4-204ENST00000446876 ZNF564Q8TBZ8 553 aaPredicted RBP15.17■□□□□ 0.02
HDAC4-204ENST00000446876 GANCQ8TET4 914 aa15.17■□□□□ 0.02
HDAC4-204ENST00000446876 CCDC42Q96M95 316 aa15.17■□□□□ 0.02
HDAC4-204ENST00000446876 ACE2Q9BYF1 805 aaPredicted RBP15.17■□□□□ 0.02
HDAC4-204ENST00000446876 KLC2Q9H0B6 622 aa15.17■□□□□ 0.02
HDAC4-204ENST00000446876 TNKS2Q9H2K2 1166 aa15.17■□□□□ 0.02
HDAC4-204ENST00000446876 ZWILCHQ9H900 591 aa15.17■□□□□ 0.02
HDAC4-204ENST00000446876 CTTNBP2NLQ9P2B4 639 aa15.17■□□□□ 0.02
HDAC4-204ENST00000446876 A0A1W2PP55 124 aa15.16■□□□□ 0.02
HDAC4-204ENST00000446876 EEF2KO00418 725 aaKnown RBP15.16■□□□□ 0.02
HDAC4-204ENST00000446876 PLK4O00444 970 aa15.16■□□□□ 0.02
HDAC4-204ENST00000446876 GDF9O60383 454 aa15.16■□□□□ 0.02
HDAC4-204ENST00000446876 RNASEH1O60930 286 aaKnown RBP15.16■□□□□ 0.02
HDAC4-204ENST00000446876 IL1BP01584 269 aa15.16■□□□□ 0.02
HDAC4-204ENST00000446876 H2AFZP0C0S5 128 aa15.16■□□□□ 0.02
HDAC4-204ENST00000446876 ZNF806P0C7X5 589 aa15.16■□□□□ 0.02
HDAC4-204ENST00000446876 GOT1P17174 413 aa15.16■□□□□ 0.02
HDAC4-204ENST00000446876 MAOBP27338 520 aa15.16■□□□□ 0.02
HDAC4-204ENST00000446876 OXTRP30559 389 aa15.16■□□□□ 0.02
HDAC4-204ENST00000446876 ELAVL3Q14576 367 aaKnown RBP15.16■□□□□ 0.02
HDAC4-204ENST00000446876 POLD3Q15054 466 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms