RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 CYLC2Q14093 348 aaPredicted RBP14.49□□□□□ -0.09
ERCC3-203ENST00000445889 PLPPR4Q7Z2D5 763 aa14.49□□□□□ -0.09
ERCC3-203ENST00000445889 RIOX2Q8IUF8 465 aa14.49□□□□□ -0.09
ERCC3-203ENST00000445889 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.49□□□□□ -0.09
ERCC3-203ENST00000445889 RTKNQ9BST9 563 aa14.49□□□□□ -0.09
ERCC3-203ENST00000445889 CDHR5Q9HBB8 845 aa14.49□□□□□ -0.09
ERCC3-203ENST00000445889 LMCD1Q9NZU5 365 aa14.49□□□□□ -0.09
ERCC3-203ENST00000445889 RUVBL2Q9Y230 463 aaKnown RBP14.49□□□□□ -0.09
ERCC3-203ENST00000445889 PHIPQ8WWQ0 1821 aa14.49□□□□□ -0.09
ERCC3-203ENST00000445889 H3BSA7 217 aa14.49□□□□□ -0.09
ERCC3-203ENST00000445889 IRF6O14896 467 aa14.49□□□□□ -0.09
ERCC3-203ENST00000445889 ZFXP17010 805 aaPredicted RBP14.49□□□□□ -0.09
ERCC3-203ENST00000445889 SPRP35270 261 aaPredicted RBP14.49□□□□□ -0.09
ERCC3-203ENST00000445889 GARSP41250 739 aaKnown RBP14.49□□□□□ -0.09
ERCC3-203ENST00000445889 ATP6V1E2Q96A05 226 aa14.49□□□□□ -0.09
ERCC3-203ENST00000445889 CELF6Q96J87 481 aaKnown RBP14.49□□□□□ -0.09
ERCC3-203ENST00000445889 CPNE1Q99829 537 aa14.49□□□□□ -0.09
ERCC3-203ENST00000445889 ACE2Q9BYF1 805 aaPredicted RBP14.49□□□□□ -0.09
ERCC3-203ENST00000445889 VRTNQ9H8Y1 702 aa14.49□□□□□ -0.09
ERCC3-203ENST00000445889 PIM2Q9P1W9 311 aa14.49□□□□□ -0.09
ERCC3-203ENST00000445889 GMPR2Q9P2T1 348 aaKnown RBP14.49□□□□□ -0.09
ERCC3-203ENST00000445889 STK39Q9UEW8 545 aa14.49□□□□□ -0.09
ERCC3-203ENST00000445889 FZD10Q9ULW2 581 aa14.49□□□□□ -0.09
ERCC3-203ENST00000445889 ZCWPW2A0A1B0GU75 182 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 I6L893 689 aaPredicted RBP14.48□□□□□ -0.09
ERCC3-203ENST00000445889 MYL4P12829 197 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 HNRNPLP14866 589 aaKnown RBP eCLIP14.48□□□□□ -0.09
ERCC3-203ENST00000445889 GLDCP23378 1020 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 XIAPP98170 497 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 CTBP1Q13363 440 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 ART3Q13508 389 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 RARS2Q5T160 578 aaKnown RBP14.48□□□□□ -0.09
ERCC3-203ENST00000445889 STXBP5Q5T5C0 1151 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 CYP2R1Q6VVX0 501 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 BNC2Q6ZN30 1099 aaPredicted RBP14.48□□□□□ -0.09
ERCC3-203ENST00000445889 PIGZQ86VD9 579 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 RNF135Q8IUD6 432 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 CEP70Q8NHQ1 597 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 ZNF512Q96ME7 567 aaPredicted RBP14.48□□□□□ -0.09
ERCC3-203ENST00000445889 BTBD9Q96Q07 612 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 FERMT1Q9BQL6 677 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 C11orf84Q9BUA3 381 aaPredicted RBP14.48□□□□□ -0.09
ERCC3-203ENST00000445889 HSFX1Q9UBD0 423 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 SIP14410 1827 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 RGSL1A5PLK6 1076 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 RNASEH2AO75792 299 aaKnown RBP14.48□□□□□ -0.09
ERCC3-203ENST00000445889 ALOX15P16050 662 aaPredicted RBP14.48□□□□□ -0.09
ERCC3-203ENST00000445889 GNL1P36915 607 aaPredicted RBP14.48□□□□□ -0.09
ERCC3-203ENST00000445889 RGS2P41220 211 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 LIMK2P53671 638 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 TNFAIP2Q03169 654 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 RALGDSQ12967 914 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 MPP3Q13368 585 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 ZNF423Q2M1K9 1284 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 GRTP1Q5TC63 336 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 SEL1L3Q68CR1 1132 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 SLC41A1Q8IVJ1 513 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 TMIGD2Q96BF3 282 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 LENG1Q96BZ8 264 aaPredicted RBP14.48□□□□□ -0.09
ERCC3-203ENST00000445889 DTNBP1Q96EV8 351 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 VPS39Q96JC1 886 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 MRPL1Q9BYD6 325 aaKnown RBP14.48□□□□□ -0.09
ERCC3-203ENST00000445889 NXF3Q9H4D5 531 aaKnown RBP14.48□□□□□ -0.09
ERCC3-203ENST00000445889 WDR41Q9HAD4 459 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 PIGVQ9NUD9 493 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 PHF24Q9UPV7 400 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 TLL2Q9Y6L7 1015 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 XPO1O14980 1071 aaKnown RBP14.48□□□□□ -0.09
ERCC3-203ENST00000445889 GRID2O43424 1007 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 GAS2O43903 313 aaKnown RBP14.48□□□□□ -0.09
ERCC3-203ENST00000445889 ZBTB7AO95365 584 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 SBK3P0C264 359 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 THRAP10827 490 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 SERPINB8P50452 374 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 USP10Q14694 798 aaKnown RBP14.48□□□□□ -0.09
ERCC3-203ENST00000445889 GK5Q6ZS86 529 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 SLC26A9Q7LBE3 791 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 KCNMB4Q86W47 210 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 DENND6AQ8IWF6 608 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 MARVELD2Q8N4S9 558 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 AFG1LQ8WV93 481 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 CENPIQ92674 756 aaPredicted RBP14.48□□□□□ -0.09
ERCC3-203ENST00000445889 FTHL17Q9BXU8 183 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 ERAP1Q9NZ08 941 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 KIAA1257Q9ULG3 409 aa14.48□□□□□ -0.09
ERCC3-203ENST00000445889 KCNU1A8MYU2 1149 aa14.47□□□□□ -0.09
ERCC3-203ENST00000445889 MATN2O00339 956 aa14.47□□□□□ -0.09
ERCC3-203ENST00000445889 EEF2KO00418 725 aaKnown RBP14.47□□□□□ -0.09
ERCC3-203ENST00000445889 PFDN1O60925 122 aa14.47□□□□□ -0.09
ERCC3-203ENST00000445889 USP2O75604 605 aaPredicted RBP14.47□□□□□ -0.09
ERCC3-203ENST00000445889 ERCC2P18074 760 aa14.47□□□□□ -0.09
ERCC3-203ENST00000445889 TSPAN8P19075 237 aa14.47□□□□□ -0.09
ERCC3-203ENST00000445889 PTPN3P26045 913 aa14.47□□□□□ -0.09
ERCC3-203ENST00000445889 SOX11P35716 441 aa14.47□□□□□ -0.09
ERCC3-203ENST00000445889 PTPN9P43378 593 aa14.47□□□□□ -0.09
ERCC3-203ENST00000445889 CCDC153Q494R4 210 aa14.47□□□□□ -0.09
ERCC3-203ENST00000445889 PITRM1Q5JRX3 1037 aa14.47□□□□□ -0.09
ERCC3-203ENST00000445889 IL23RQ5VWK5 629 aa14.47□□□□□ -0.09
ERCC3-203ENST00000445889 POTEAQ6S8J7 498 aa14.47□□□□□ -0.09
ERCC3-203ENST00000445889 B3GNT6Q6ZMB0 384 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms