RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 CAPN11Q9UMQ6 739 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 SLC9A8Q9Y2E8 581 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 HBS1LQ9Y450 684 aaKnown RBP2.86□□□□□ -1.95
UBBP3-201ENST00000445497 MAB21L2Q9Y586 359 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 PCDHB5Q9Y5E4 795 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 CFAP20Q9Y6A4 193 aaKnown RBP2.86□□□□□ -1.95
UBBP3-201ENST00000445497 SYNGAP1Q96PV0 1343 aa2.86□□□□□ -1.95
UBBP3-201ENST00000445497 RPAP1Q9BWH6 1393 aaPredicted RBP2.86□□□□□ -1.95
UBBP3-201ENST00000445497 TRBV2A0A0J9YWF9 115 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 A0A1B0GTQ1 180 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 A0A1W2PQ72 361 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 FRMD3A2A2Y4 597 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 OOEPA6NGQ2 149 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 AQP12BA6NM10 295 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 OR6C76A6NM76 312 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 ZNF839A8K0R7 811 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 FOXO6A8MYZ6 492 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 C3orf80F5H4A9 247 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 ARVCFO00192 962 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 DENRO43583 198 aaKnown RBP2.85□□□□□ -1.95
UBBP3-201ENST00000445497 HRO43593 1189 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 GATCO43716 136 aaKnown RBP2.85□□□□□ -1.95
UBBP3-201ENST00000445497 VEGFDO43915 354 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 XYLBO75191 536 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 ENTPD3O75355 529 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 RBBP9O75884 186 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 PDE9AO76083 593 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 ACTL6BO94805 426 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 SEC31AO94979 1220 aaKnown RBP2.85□□□□□ -1.95
UBBP3-201ENST00000445497 HEXIM1O94992 359 aaKnown RBP2.85□□□□□ -1.95
UBBP3-201ENST00000445497 KCNK5O95279 499 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 ZIC2O95409 532 aaPredicted RBP2.85□□□□□ -1.95
UBBP3-201ENST00000445497 STAU1O95793 577 aaKnown RBP2.85□□□□□ -1.95
UBBP3-201ENST00000445497 EGFRP00533 1210 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 MT-ATP6P00846 226 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 LDLRP01130 860 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 PENKP01210 267 aaPredicted RBP2.85□□□□□ -1.95
UBBP3-201ENST00000445497 APOEP02649 317 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 PCCBP05166 539 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 IL6P05231 212 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 PRKCBP05771 671 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 LIPFP07098 398 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 EPHX1P07099 455 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 ANXA2P07355 339 aaKnown RBP2.85□□□□□ -1.95
UBBP3-201ENST00000445497 CAPN1P07384 714 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 YES1P07947 543 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 PABPC4LP0CB38 370 aaKnown RBP2.85□□□□□ -1.95
UBBP3-201ENST00000445497 CCDC166P0CW27 439 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 CALCBP10092 127 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 UMPSP11172 480 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 ODC1P11926 461 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 DARSP14868 501 aaKnown RBP2.85□□□□□ -1.95
UBBP3-201ENST00000445497 ETS1P14921 441 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 CHN1P15882 459 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 PRKCAP17252 672 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 HOXB8P17481 243 aaPredicted RBP2.85□□□□□ -1.95
UBBP3-201ENST00000445497 PFKLP17858 780 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 VCLP18206 1134 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 RXRAP19793 462 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 NME2P22392 152 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 HNRNPA2B1P22626 353 aaKnown RBP2.85□□□□□ -1.95
UBBP3-201ENST00000445497 MYF6P23409 242 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 AHCYP23526 432 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 NR2F2P24468 414 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 PTPN4P29074 926 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 LRPAP1P30533 357 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 YWHABP31946 246 aaKnown RBP2.85□□□□□ -1.95
UBBP3-201ENST00000445497 GCKP35557 465 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 PTGER3P43115 390 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 SCTRP47872 440 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 FASLGP48023 281 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 CARSP49589 748 aaKnown RBP2.85□□□□□ -1.95
UBBP3-201ENST00000445497 NPY4RP50391 375 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 FXR1P51114 621 aaKnown RBP eCLIP2.85□□□□□ -1.95
UBBP3-201ENST00000445497 CLCNKAP51800 687 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 RAP1GDS1P52306 607 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 SEC24CP53992 1094 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 EIF3BP55884 814 aaKnown RBP2.85□□□□□ -1.95
UBBP3-201ENST00000445497 BCAR1P56945 870 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 RAB4BP61018 213 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 YWHAGP61981 247 aaKnown RBP eCLIP2.85□□□□□ -1.95
UBBP3-201ENST00000445497 YWHAEP62258 255 aaKnown RBP2.85□□□□□ -1.95
UBBP3-201ENST00000445497 PSMC6P62333 389 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 RPP30P78346 268 aaKnown RBP2.85□□□□□ -1.95
UBBP3-201ENST00000445497 PMP22Q01453 160 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 ROR2Q01974 943 aaKnown RBP2.85□□□□□ -1.95
UBBP3-201ENST00000445497 SRSF11Q05519 484 aaKnown RBP2.85□□□□□ -1.95
UBBP3-201ENST00000445497 SOX4Q06945 474 aaPredicted RBP2.85□□□□□ -1.95
UBBP3-201ENST00000445497 PPP3CAQ08209 521 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 GOLGA8FQ08AF8 430 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 GOLGA8DPQ0D2H9 430 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 SCRN3Q0VDG4 424 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 OVGP1Q12889 678 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 LCP2Q13094 533 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 MAB21L1Q13394 359 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 XRCC4Q13426 336 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 TUBB3Q13509 450 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 CAMK1Q14012 370 aa2.85□□□□□ -1.95
UBBP3-201ENST00000445497 USP10Q14694 798 aaKnown RBP2.85□□□□□ -1.95
UBBP3-201ENST00000445497 ZNF174Q15697 407 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms