RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 HGH1Q9BTY7 390 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 ASB8Q9H765 288 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 GON4LQ3T8J9 2241 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 CD44P16070 742 aaKnown RBP11.4□□□□□ -0.58
FN1-211ENST00000443816 MGAT1P26572 445 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 FMO4P31512 558 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 COPZ1P61923 177 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 DNAJC3Q13217 504 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 PPP2R2DQ66LE6 453 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 ZNF470Q6ECI4 717 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 KRT73Q86Y46 540 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 TTLL2Q9BWV7 592 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 ATAD3AQ9NVI7 634 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 BTN3A1O00481 513 aa11.4□□□□□ -0.59
FN1-211ENST00000443816 COX7A2P14406 83 aa11.4□□□□□ -0.59
FN1-211ENST00000443816 GLRA2P23416 452 aa11.4□□□□□ -0.59
FN1-211ENST00000443816 LRRC36Q1X8D7 754 aa11.4□□□□□ -0.59
FN1-211ENST00000443816 LPPQ93052 612 aa11.4□□□□□ -0.59
FN1-211ENST00000443816 FAIM2Q9BWQ8 316 aa11.4□□□□□ -0.59
FN1-211ENST00000443816 HPSEQ9Y251 543 aa11.4□□□□□ -0.59
FN1-211ENST00000443816 GRM6O15303 877 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 SEC22BO75396 215 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 KRT33AO76009 404 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 ELFN1P0C7U0 828 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 TFE3P19532 575 aaPredicted RBP11.39□□□□□ -0.59
FN1-211ENST00000443816 GABRR2P28476 465 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 MIPP30301 263 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 PARP6Q2NL67 630 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 KCNT2Q6UVM3 1135 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 DET1Q7L5Y6 550 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 PSTKQ8IV42 348 aaKnown RBP11.39□□□□□ -0.59
FN1-211ENST00000443816 MOSPD2Q8NHP6 518 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 COPS5Q92905 334 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 SIKE1Q9BRV8 207 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 ZDHHC4Q9NPG8 344 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 ZNF142P52746 1687 aaPredicted RBP11.39□□□□□ -0.59
FN1-211ENST00000443816 WDR27A2RRH5 827 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 EML1O00423 815 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 SLC25A12O75746 678 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 IFNA16P05015 189 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 CCNB1P14635 433 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 ELNP15502 786 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 CRY1Q16526 586 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 CBWD6Q4V339 395 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 FAM180AQ6UWF9 173 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 CYP4X1Q8N118 509 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 ZNF248Q8NDW4 579 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 SYT17Q9BSW7 474 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 ADAM30Q9UKF2 790 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 SLC27A5Q9Y2P5 690 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 CD86P42081 329 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 SLC1A6P48664 564 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 PTENP60484 403 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 ERVK-21P61565 698 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 TAF13Q15543 124 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 MAB21L3Q8N8X9 362 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 ERLEC1Q96DZ1 483 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 OSGEPQ9NPF4 335 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 MOXD2PA6NHM9 499 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 VSTM1Q6UX27 236 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 C1orf186Q6ZWK4 172 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 TOP6BLQ8N6T0 577 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 CEP44Q9C0F1 390 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 KLC4Q9NSK0 619 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 ASTN2O75129 1339 aaPredicted RBP11.39□□□□□ -0.59
FN1-211ENST00000443816 BTBD19C9JJ37 291 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 ERBB2P04626 1255 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 UBE3AQ05086 875 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 ARHGAP17Q68EM7 881 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 PROX1Q92786 737 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 ZIM3Q96PE6 472 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 DDX20Q9UHI6 824 aaKnown RBP11.39□□□□□ -0.59
FN1-211ENST00000443816 ARIH1Q9Y4X5 557 aaPredicted RBP11.39□□□□□ -0.59
FN1-211ENST00000443816 OR1D2P34982 312 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 TBL3Q12788 808 aaKnown RBP11.39□□□□□ -0.59
FN1-211ENST00000443816 CRYMQ14894 314 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 GPR158Q5T848 1215 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 ZDHHC20Q5W0Z9 365 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 CAPRIN2Q6IMN6 1127 aaKnown RBP11.39□□□□□ -0.59
FN1-211ENST00000443816 EID3Q8N140 333 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 PPIEQ9UNP9 301 aaKnown RBP11.39□□□□□ -0.59
FN1-211ENST00000443816 SIGLEC1Q9BZZ2 1709 aa11.39□□□□□ -0.59
FN1-211ENST00000443816 TBC1D3DA0A087WVF3 549 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 TBC1D3IA0A087WXS9 549 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 TBC1D3EA0A087X179 549 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 TBC1D3KA0A087X1G2 549 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 TBC1D3FA6NER0 549 aaPredicted RBP11.38□□□□□ -0.59
FN1-211ENST00000443816 EIF4E1BA6NMX2 242 aaKnown RBP11.38□□□□□ -0.59
FN1-211ENST00000443816 TBC1D3LB9A6J9 549 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 NEDD8-MDP1E9PL57 170 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 EPN2O95208 641 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 TBC1D3HP0C7X1 549 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.38□□□□□ -0.59
FN1-211ENST00000443816 TBC1D3GQ6DHY5 549 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 TBC1D3CQ6IPX1 549 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 AFTPHQ6ULP2 937 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 MON1AQ86VX9 555 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 PHYKPLQ8IUZ5 450 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 TBC1D3Q8IZP1 549 aaPredicted RBP11.38□□□□□ -0.59
FN1-211ENST00000443816 ZFP28Q8NHY6 868 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms