RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 LRRC19Q9H756 370 aa13.16□□□□□ -0.3
PDLIM2-212ENST00000443561 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.16□□□□□ -0.3
PDLIM2-212ENST00000443561 VPS28Q9UK41 221 aa13.16□□□□□ -0.3
PDLIM2-212ENST00000443561 HS3ST2Q9Y278 367 aa13.16□□□□□ -0.3
PDLIM2-212ENST00000443561 PLXNA2O75051 1894 aa13.16□□□□□ -0.3
PDLIM2-212ENST00000443561 RALGAPA1Q6GYQ0 2036 aa13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 TP53BP1Q12888 1972 aaPredicted RBP13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 PRR23AA6NEV1 266 aa13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 C10orf142B7Z368 130 aa13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 NPC1O15118 1278 aa13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 PJA2O43164 708 aa13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 BUB1BO60566 1050 aaPredicted RBP13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 ATP5BP06576 529 aaKnown RBP13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 AMPD1P23109 780 aa13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 CYLC1P35663 651 aaPredicted RBP13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 MARCKSL1P49006 195 aa13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 TPI1P60174 286 aa13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 CCZ1BP86790 482 aa13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 CCZ1P86791 482 aaPredicted RBP13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 DPYSL3Q14195 570 aa13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 ZNF783Q6ZMS7 281 aa13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 LEKR1Q6ZMV7 388 aa13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 ARHGAP36Q6ZRI8 547 aa13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 NUDT18Q6ZVK8 323 aa13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 KBTBD6Q86V97 674 aa13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 CACUL1Q86Y37 369 aa13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 UMODL1-AS1Q8N2C9 162 aa13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 KDM1BQ8NB78 822 aa13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 GAB3Q8WWW8 586 aa13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 HSPH1Q92598 858 aa13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 ZNF419Q96HQ0 510 aaPredicted RBP13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 CSPG4P5Q96PW8 444 aa13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 EPAS1Q99814 870 aa13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 MUC3BQ9H195 1237 aa13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 DUSP15Q9H1R2 295 aaPredicted RBP13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 PDFQ9HBH1 243 aa13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 USP36Q9P275 1121 aaKnown RBP13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 SERGEFQ9UGK8 458 aa13.15□□□□□ -0.3
PDLIM2-212ENST00000443561 A0A0A6YYK5 440 aaPredicted RBP13.14□□□□□ -0.31
PDLIM2-212ENST00000443561 IGHV1OR15-9A0A0B4J2B8 117 aa13.14□□□□□ -0.31
PDLIM2-212ENST00000443561 RASA4BC9J798 803 aa13.14□□□□□ -0.31
PDLIM2-212ENST00000443561 EEF2KO00418 725 aaKnown RBP13.14□□□□□ -0.31
PDLIM2-212ENST00000443561 RASA4O43374 803 aa13.14□□□□□ -0.31
PDLIM2-212ENST00000443561 CTSLP07711 333 aa13.14□□□□□ -0.31
PDLIM2-212ENST00000443561 GJC1P36383 396 aa13.14□□□□□ -0.31
PDLIM2-212ENST00000443561 RPS14P62263 151 aaKnown RBP13.14□□□□□ -0.31
PDLIM2-212ENST00000443561 LPAL2Q16609 132 aa13.14□□□□□ -0.31
PDLIM2-212ENST00000443561 PPP6R3Q5H9R7 873 aaPredicted RBP13.14□□□□□ -0.31
PDLIM2-212ENST00000443561 C6orf118Q5T5N4 469 aa13.14□□□□□ -0.31
PDLIM2-212ENST00000443561 Q6ZVU0 165 aa13.14□□□□□ -0.31
PDLIM2-212ENST00000443561 RHOT2Q8IXI1 618 aa13.14□□□□□ -0.31
PDLIM2-212ENST00000443561 STK40Q8N2I9 435 aa13.14□□□□□ -0.31
PDLIM2-212ENST00000443561 PQLC3Q8N755 202 aa13.14□□□□□ -0.31
PDLIM2-212ENST00000443561 OR2T3Q8NH03 318 aa13.14□□□□□ -0.31
PDLIM2-212ENST00000443561 TPCN2Q8NHX9 752 aa13.14□□□□□ -0.31
PDLIM2-212ENST00000443561 PCDH19Q8TAB3 1148 aa13.14□□□□□ -0.31
PDLIM2-212ENST00000443561 RAPGEF5Q92565 580 aa13.14□□□□□ -0.31
PDLIM2-212ENST00000443561 FAF2Q96CS3 445 aa13.14□□□□□ -0.31
PDLIM2-212ENST00000443561 CELF6Q96J87 481 aaKnown RBP13.14□□□□□ -0.31
PDLIM2-212ENST00000443561 SLC39A8Q9C0K1 460 aa13.14□□□□□ -0.31
PDLIM2-212ENST00000443561 RSPH9Q9H1X1 276 aaPredicted RBP13.14□□□□□ -0.31
PDLIM2-212ENST00000443561 POLMQ9NP87 494 aaPredicted RBP13.14□□□□□ -0.31
PDLIM2-212ENST00000443561 SARDHQ9UL12 918 aa13.14□□□□□ -0.31
PDLIM2-212ENST00000443561 SMG5Q9UPR3 1016 aaKnown RBP13.14□□□□□ -0.31
PDLIM2-212ENST00000443561 LRRK1Q38SD2 2015 aa13.13□□□□□ -0.31
PDLIM2-212ENST00000443561 FGF10O15520 208 aaPredicted RBP13.13□□□□□ -0.31
PDLIM2-212ENST00000443561 RAMP2O60895 175 aa13.13□□□□□ -0.31
PDLIM2-212ENST00000443561 RPP40O75818 363 aaKnown RBP13.13□□□□□ -0.31
PDLIM2-212ENST00000443561 MOCS3O95396 460 aa13.13□□□□□ -0.31
PDLIM2-212ENST00000443561 IGLV3-19P01714 112 aa13.13□□□□□ -0.31
PDLIM2-212ENST00000443561 COMTP21964 271 aa13.13□□□□□ -0.31
PDLIM2-212ENST00000443561 HTR7P34969 479 aa13.13□□□□□ -0.31
PDLIM2-212ENST00000443561 HCAR3P49019 387 aa13.13□□□□□ -0.31
PDLIM2-212ENST00000443561 SERPINH1P50454 418 aaKnown RBP13.13□□□□□ -0.31
PDLIM2-212ENST00000443561 VAV2P52735 878 aa13.13□□□□□ -0.31
PDLIM2-212ENST00000443561 NRLP54845 237 aa13.13□□□□□ -0.31
PDLIM2-212ENST00000443561 OXCT1P55809 520 aa13.13□□□□□ -0.31
PDLIM2-212ENST00000443561 SERINC3Q13530 473 aa13.13□□□□□ -0.31
PDLIM2-212ENST00000443561 DLG2Q15700 870 aa13.13□□□□□ -0.31
PDLIM2-212ENST00000443561 PLK5Q496M5 336 aa13.13□□□□□ -0.31
PDLIM2-212ENST00000443561 BOLA3Q53S33 107 aa13.13□□□□□ -0.31
PDLIM2-212ENST00000443561 C22orf39Q6P5X5 142 aa13.13□□□□□ -0.31
PDLIM2-212ENST00000443561 TMPRSS6Q8IU80 811 aa13.13□□□□□ -0.31
PDLIM2-212ENST00000443561 LRRC57Q8N9N7 239 aa13.13□□□□□ -0.31
PDLIM2-212ENST00000443561 CHST14Q8NCH0 376 aa13.13□□□□□ -0.31
PDLIM2-212ENST00000443561 NSMCE3Q96MG7 304 aa13.13□□□□□ -0.31
PDLIM2-212ENST00000443561 MAGEH1Q9H213 219 aa13.13□□□□□ -0.31
PDLIM2-212ENST00000443561 RETREG1Q9H6L5 497 aa13.13□□□□□ -0.31
PDLIM2-212ENST00000443561 ATP13A1Q9HD20 1204 aa13.13□□□□□ -0.31
PDLIM2-212ENST00000443561 PLA2G4CQ9UP65 541 aa13.13□□□□□ -0.31
PDLIM2-212ENST00000443561 FCF1Q9Y324 198 aaKnown RBP13.13□□□□□ -0.31
PDLIM2-212ENST00000443561 PCDH15Q96QU1 1955 aa13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 GON4LQ3T8J9 2241 aa13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 ZFHX2Q9C0A1 2572 aaPredicted RBP13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 FAM186AA6NE01 2351 aa13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 EDDM13A0A1B0GTR0 161 aa13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 BTNL10A8MVZ5 291 aa13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 J3KR12 359 aa13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 CBX4O00257 560 aa13.12□□□□□ -0.31
PDLIM2-212ENST00000443561 PLK4O00444 970 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms