RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 E9PBE3 544 aa10.79□□□□□ -0.68
CALD1-210ENST00000443197 KLHL41O60662 606 aa10.79□□□□□ -0.68
CALD1-210ENST00000443197 HDCP19113 662 aa10.79□□□□□ -0.68
CALD1-210ENST00000443197 CRYMQ14894 314 aa10.79□□□□□ -0.68
CALD1-210ENST00000443197 FSCBQ5H9T9 825 aa10.79□□□□□ -0.68
CALD1-210ENST00000443197 PPM1JQ5JR12 505 aa10.79□□□□□ -0.68
CALD1-210ENST00000443197 HECTD3Q5T447 861 aa10.79□□□□□ -0.68
CALD1-210ENST00000443197 SLAIN1Q8ND83 568 aa10.79□□□□□ -0.68
CALD1-210ENST00000443197 C3orf58Q8NDZ4 430 aa10.79□□□□□ -0.68
CALD1-210ENST00000443197 AUTS2Q8WXX7 1259 aa10.79□□□□□ -0.68
CALD1-210ENST00000443197 CASP10Q92851 521 aa10.79□□□□□ -0.68
CALD1-210ENST00000443197 TMA16Q96EY4 203 aaKnown RBP10.79□□□□□ -0.68
CALD1-210ENST00000443197 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.79□□□□□ -0.68
CALD1-210ENST00000443197 SCUBE2Q9NQ36 999 aa10.79□□□□□ -0.68
CALD1-210ENST00000443197 TTC24A2A3L6 582 aaPredicted RBP10.79□□□□□ -0.68
CALD1-210ENST00000443197 C2orf71A6NGG8 1288 aa10.79□□□□□ -0.68
CALD1-210ENST00000443197 ATXN8OSP0DMR3 200 aa10.79□□□□□ -0.68
CALD1-210ENST00000443197 ACRP10323 421 aa10.79□□□□□ -0.68
CALD1-210ENST00000443197 NPY2RP49146 381 aa10.79□□□□□ -0.68
CALD1-210ENST00000443197 DDX53Q86TM3 631 aaKnown RBP10.79□□□□□ -0.68
CALD1-210ENST00000443197 TRPV1Q8NER1 839 aa10.79□□□□□ -0.68
CALD1-210ENST00000443197 TMEM174Q8WUU8 243 aa10.79□□□□□ -0.68
CALD1-210ENST00000443197 ZNF558Q96NG5 402 aa10.79□□□□□ -0.68
CALD1-210ENST00000443197 PPP1R10Q96QC0 940 aaKnown RBP10.79□□□□□ -0.68
CALD1-210ENST00000443197 OMDQ99983 421 aa10.79□□□□□ -0.68
CALD1-210ENST00000443197 FBXO6Q9NRD1 293 aaPredicted RBP10.79□□□□□ -0.68
CALD1-210ENST00000443197 OLA1Q9NTK5 396 aaKnown RBP10.79□□□□□ -0.68
CALD1-210ENST00000443197 GJD2Q9UKL4 321 aa10.79□□□□□ -0.68
CALD1-210ENST00000443197 CFAP73A6NFT4 308 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 E9PAM4 449 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 ARVCFO00192 962 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 DNAJC6O75061 913 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 SMIM24O75264 130 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 ITGA2BP08514 1039 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 RAD51Q06609 339 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 UPP1Q16831 310 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 FAM83EQ2M2I3 478 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 SPANXN3Q5MJ09 141 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 IGDCC3Q8IVU1 814 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 PPWD1Q96BP3 646 aaKnown RBP10.78□□□□□ -0.68
CALD1-210ENST00000443197 CENPTQ96BT3 561 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 IL22Q9GZX6 179 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 BRD8Q9H0E9 1235 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 ADAM7Q9H2U9 754 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 FGF10O15520 208 aaPredicted RBP10.78□□□□□ -0.68
CALD1-210ENST00000443197 SH3BP5O60239 455 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 ZNF189O75820 626 aaPredicted RBP10.78□□□□□ -0.68
CALD1-210ENST00000443197 PTPN3P26045 913 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 LRPAP1P30533 357 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 WNT3AP56704 352 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 GPX6P59796 221 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 SMAD3P84022 425 aaKnown RBP10.78□□□□□ -0.68
CALD1-210ENST00000443197 BST1Q10588 318 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 MTFR1Q15390 333 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 NEPROQ6NW34 567 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 CYB5D1Q6P9G0 228 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 OR10T2Q8NGX3 314 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 OR6K2Q8NGY2 324 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 GANCQ8TET4 914 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 SLC44A1Q8WWI5 657 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 ADA2Q9NZK5 511 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 UXTQ9UBK9 157 aaPredicted RBP10.78□□□□□ -0.68
CALD1-210ENST00000443197 DNMT3LQ9UJW3 386 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 TRIM33Q9UPN9 1127 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 GRIN2DO15399 1336 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 MCM3APO60318 1980 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 MGEA5O60502 916 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 SHOX2O60902 331 aaPredicted RBP10.78□□□□□ -0.68
CALD1-210ENST00000443197 EOMESO95936 686 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 PFKMP08237 780 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 ITGB6P18564 788 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 TCN1P20061 433 aaPredicted RBP10.78□□□□□ -0.68
CALD1-210ENST00000443197 IVDP26440 423 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 PPARGP37231 505 aaPredicted RBP10.78□□□□□ -0.68
CALD1-210ENST00000443197 SH2D4BQ5SQS7 431 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 MRNIPQ6NTE8 343 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 VSTM1Q6UX27 236 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 LMNTD2Q8IXW0 634 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 ZNF296Q8WUU4 475 aaPredicted RBP10.78□□□□□ -0.68
CALD1-210ENST00000443197 UNC93B1Q9H1C4 597 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 MYLK2Q9H1R3 596 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 PCDHB8Q9UN66 801 aa10.78□□□□□ -0.68
CALD1-210ENST00000443197 MAGEB16A2A368 324 aa10.77□□□□□ -0.68
CALD1-210ENST00000443197 C5orf60A6NFR6 353 aa10.77□□□□□ -0.68
CALD1-210ENST00000443197 C2orf81A6NN90 581 aa10.77□□□□□ -0.68
CALD1-210ENST00000443197 CXorf49A8MYA2 514 aaPredicted RBP10.77□□□□□ -0.68
CALD1-210ENST00000443197 SUPT3HB4E1H0 165 aa10.77□□□□□ -0.68
CALD1-210ENST00000443197 CHUKO15111 745 aa10.77□□□□□ -0.68
CALD1-210ENST00000443197 SUPT3HO75486 399 aa10.77□□□□□ -0.68
CALD1-210ENST00000443197 SRP72O76094 671 aaKnown RBP10.77□□□□□ -0.68
CALD1-210ENST00000443197 STAU1O95793 577 aaKnown RBP10.77□□□□□ -0.68
CALD1-210ENST00000443197 ENO3P13929 434 aaPredicted RBP10.77□□□□□ -0.68
CALD1-210ENST00000443197 HNRNPH1P31943 449 aaKnown RBP10.77□□□□□ -0.68
CALD1-210ENST00000443197 CHRNA4P43681 627 aa10.77□□□□□ -0.68
CALD1-210ENST00000443197 SLC10A2Q12908 348 aaPredicted RBP10.77□□□□□ -0.68
CALD1-210ENST00000443197 GALNT3Q14435 633 aa10.77□□□□□ -0.68
CALD1-210ENST00000443197 HIC1Q14526 733 aa10.77□□□□□ -0.68
CALD1-210ENST00000443197 RASA2Q15283 850 aa10.77□□□□□ -0.68
CALD1-210ENST00000443197 LRRC36Q1X8D7 754 aa10.77□□□□□ -0.68
CALD1-210ENST00000443197 PPP1R15BQ5SWA1 713 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms