RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 AP3B2Q13367 1082 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 UBE3CQ15386 1083 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 FUT11Q495W5 492 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 C6orf10Q5SRN2 563 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 NDUFAF5Q5TEU4 345 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 SLFN13Q68D06 897 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 SLC9A4Q6AI14 798 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 TTC27Q6P3X3 843 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 DCUN1D2Q6PH85 259 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 ARSKQ6UWY0 536 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 DTHD1Q6ZMT9 781 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 ZNF704Q6ZNC4 412 aaPredicted RBP2.83□□□□□ -1.96
LIG4-203ENST00000442234 LIAT1Q6ZQX7 453 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 TRIM22Q8IYM9 498 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 ULK2Q8IYT8 1036 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 MICU2Q8IYU8 434 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 TMEM199Q8N511 208 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 METTL25Q8N6Q8 603 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 LEMD2Q8NC56 503 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 GSTCDQ8NEC7 633 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 POMGNT1Q8WZA1 660 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 JADE3Q92613 823 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 CIDECQ96AQ7 238 aaPredicted RBP2.83□□□□□ -1.96
LIG4-203ENST00000442234 PSD2Q9BQI7 771 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 SH2D3AQ9BRG2 576 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 MLPHQ9BV36 600 aaPredicted RBP2.83□□□□□ -1.96
LIG4-203ENST00000442234 VPS33BQ9H267 617 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 TMEM245Q9H330 911 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 SYNDIG1Q9H7V2 258 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 ADPRHL2Q9NX46 363 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 ZNF224Q9NZL3 707 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 ARMCX1Q9P291 453 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 ANKMY1Q9P2S6 941 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 DNAJB4Q9UDY4 337 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 FETUBQ9UGM5 382 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 RWDD2AQ9UIY3 292 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 ACAD8Q9UKU7 415 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 NUP50Q9UKX7 468 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 HPSEQ9Y251 543 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 STXBP5LQ9Y2K9 1186 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 CEPT1Q9Y6K0 416 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 R4GN57 208 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 MUC3AQ02505 3323 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 BPTFQ12830 3046 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 LRRC37A3O60309 1634 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 H0YJX3 145 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 CYP26A1O43174 497 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 NUAK1O60285 661 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 B4GALT4O60513 344 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 CDH16O75309 829 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 SPAG6O75602 509 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 ASGR1P07306 291 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 CREB1P16220 341 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 CCNA2P20248 432 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 GSTM2P28161 218 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 RBL1P28749 1068 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 PDIA3P30101 505 aaKnown RBP2.83□□□□□ -1.96
LIG4-203ENST00000442234 PRKAR1BP31321 381 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 TTKP33981 857 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 IL12RB1P42701 662 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 OR3A3P47888 321 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 NT5C2P49902 561 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 BMXP51813 675 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 ALDH18A1P54886 795 aaKnown RBP2.83□□□□□ -1.96
LIG4-203ENST00000442234 TNFAIP2Q03169 654 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 NME3Q13232 169 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 SP140Q13342 867 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 PPIL2Q13356 520 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 BFSP2Q13515 415 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 KIZQ2M2Z5 673 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 NAALADL2Q58DX5 795 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 KIAA1755Q5JYT7 1200 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.83□□□□□ -1.96
LIG4-203ENST00000442234 PTCRAQ6ISU1 281 aaPredicted RBP2.83□□□□□ -1.96
LIG4-203ENST00000442234 FAM180BQ6P0A1 224 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 TTC33Q6PID6 262 aaPredicted RBP2.83□□□□□ -1.96
LIG4-203ENST00000442234 WDR59Q6PJI9 974 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 STXBP4Q6ZWJ1 553 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 BEND5Q7L4P6 421 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 GSTA5Q7RTV2 222 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 C16orf62Q7Z3J2 963 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 MICU3Q86XE3 530 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 TBC1D19Q8N5T2 526 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 AADATQ8N5Z0 425 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 SLC15A4Q8N697 577 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 UBL4BQ8N7F7 174 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 POC5Q8NA72 575 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 SSH3Q8TE77 659 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 FAM172AQ8WUF8 416 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 TRUB1Q8WWH5 349 aaKnown RBP2.83□□□□□ -1.96
LIG4-203ENST00000442234 ST8SIA2Q92186 375 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 SLC9A6Q92581 669 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 DHX38Q92620 1227 aaKnown RBP2.83□□□□□ -1.96
LIG4-203ENST00000442234 TNIP3Q96KP6 325 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 DMRTB1Q96MA1 342 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 C7orf26Q96N11 449 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 GUCD1Q96NT3 240 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 PPP1R2P1Q96PQ5 205 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 IDI2Q9BXS1 227 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 TDRD1Q9BXT4 1180 aaKnown RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms