RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 PCSK1NQ9UHG2 260 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 SLC25A13Q9UJS0 675 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 CHKBQ9Y259 395 aa7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 FNDC3AQ9Y2H6 1198 aaKnown RBP7.57□□□□□ -1.2
CDC42BPA-208ENST00000442054 SCN5AQ14524 2016 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 C2orf78A6NCI8 922 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 TMEM191CA6NGB0 347 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 SIGLEC16A6NMB1 481 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 TCP11X1B4DZS4 312 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 CHADO15335 359 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 TBL1XO60907 577 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 AVPR2P30518 371 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 FASTKD3Q14CZ7 662 aaKnown RBP7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 HSF5Q4G112 596 aaPredicted RBP7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 FBXO43Q4G163 708 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 XKR4Q5GH76 650 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 LILRA6Q6PI73 481 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 PRR23CQ6ZRP0 262 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 ALLCQ8N6M5 410 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 ZNF513Q8N8E2 541 aaPredicted RBP7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 C10orf82Q8WW14 230 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 OMDQ99983 421 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 RPP25Q9BUL9 199 aaKnown RBP7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 SYNDIG1Q9H7V2 258 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 STARD13Q9Y3M8 1113 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 XPO1O14980 1071 aaKnown RBP7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 F9P00740 461 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 RHOCP08134 193 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 MMP8P22894 467 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 EPHB1P54762 984 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 COPS2P61201 443 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 C2CD6Q53TS8 623 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 CMPK2Q5EBM0 449 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 EOGTQ5NDL2 527 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 DEFB106AQ8N104 65 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 SLC35B2Q8TB61 432 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 NDRG1Q92597 394 aaKnown RBP7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 ZNF334Q9HCZ1 680 aaPredicted RBP7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 SSU72Q9NP77 194 aaKnown RBP7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 TRIM33Q9UPN9 1127 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 MAP1BP46821 2468 aaKnown RBP7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 E5RJQ4 531 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 SPECC1L-ADORA2AF8WAN1 911 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 CLGNO14967 610 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 DNTTP04053 509 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 DHRS4L1P0CG22 281 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 NFKBIAP25963 317 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 CCR3P51677 355 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 PTPN5P54829 565 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 CREB5Q02930 508 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 MPPE1Q53F39 396 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 ASTLQ6HA08 431 aaPredicted RBP7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 CPLX4Q7Z7G2 160 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 MAP7D3Q8IWC1 876 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 CRYBG2Q8N1P7 616 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 TRIM11Q96F44 468 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 MSLNLQ96KJ4 702 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 ASB16Q96NS5 453 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 EPAS1Q99814 870 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 LRFN3Q9BTN0 628 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 DHX35Q9H5Z1 703 aaKnown RBP7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 HMGXB4Q9UGU5 601 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 ANAPC7Q9UJX3 599 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 DOLKQ9UPQ8 538 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 DRG1Q9Y295 367 aaKnown RBP7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 PCDHB9Q9Y5E1 797 aa7.56□□□□□ -1.2
CDC42BPA-208ENST00000442054 ALOX15BO15296 676 aa7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 ECI2O75521 394 aa7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 TRUB2O95900 331 aaKnown RBP7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 HOXB2P14652 356 aa7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 MNAT1P51948 309 aa7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 SLC25A11Q02978 314 aaKnown RBP7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 C1QBPQ07021 282 aaKnown RBP7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 LRRC14Q15048 493 aa7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 LRRC38Q5VT99 294 aa7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 RAP1GAP2Q684P5 730 aa7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 GAREM2Q75VX8 874 aa7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 RALGPS2Q86X27 583 aaPredicted RBP7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 CCDC105Q8IYK2 499 aa7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 CCNYQ8ND76 341 aa7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 PIGKQ92643 395 aa7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 STAMBPL1Q96FJ0 436 aa7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 TMEM237Q96Q45 408 aa7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 GTPBP2Q9BX10 602 aaKnown RBP7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 CALN1Q9BXU9 219 aa7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 TPSD1Q9BZJ3 242 aa7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 LRMDAQ9H2I8 198 aa7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 LINC00597Q9H2U6 94 aa7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 SUDS3Q9H7L9 328 aaPredicted RBP7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 POPDC2Q9HBU9 364 aa7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 AASDHPPTQ9NRN7 309 aa7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 ASNSD1Q9NWL6 643 aa7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 MTRF1LQ9UGC7 380 aaKnown RBP7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 TCF20Q9UGU0 1960 aaKnown RBP7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 MICAL3Q7RTP6 2002 aa7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 ZNF840PA6NDX5 716 aa7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 KPNA3O00505 521 aaPredicted RBP7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 DNALI1O14645 258 aaPredicted RBP7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 MSI1O43347 362 aaKnown RBP7.55□□□□□ -1.2
CDC42BPA-208ENST00000442054 UNC5CO95185 931 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms