RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 VWA5B1Q5TIE3 1220 aa5.32□□□□□ -1.56
PFDN4-202ENST00000441080 LVRNQ6Q4G3 990 aa5.32□□□□□ -1.56
PFDN4-202ENST00000441080 MMS22LQ6ZRQ5 1243 aa5.32□□□□□ -1.56
PFDN4-202ENST00000441080 B4GALNT4Q76KP1 1039 aa5.32□□□□□ -1.56
PFDN4-202ENST00000441080 IGFN1Q86VF2 1251 aa5.32□□□□□ -1.56
PFDN4-202ENST00000441080 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.32□□□□□ -1.56
PFDN4-202ENST00000441080 ESX1Q8N693 406 aa5.32□□□□□ -1.56
PFDN4-202ENST00000441080 DENND1AQ8TEH3 1009 aa5.32□□□□□ -1.56
PFDN4-202ENST00000441080 RPL36ALQ969Q0 106 aaKnown RBP5.32□□□□□ -1.56
PFDN4-202ENST00000441080 EME1Q96AY2 570 aa5.32□□□□□ -1.56
PFDN4-202ENST00000441080 SH3KBP1Q96B97 665 aa5.32□□□□□ -1.56
PFDN4-202ENST00000441080 COQ8BQ96D53 544 aa5.32□□□□□ -1.56
PFDN4-202ENST00000441080 ZNF419Q96HQ0 510 aaPredicted RBP5.32□□□□□ -1.56
PFDN4-202ENST00000441080 NPLQ9BXD5 320 aaPredicted RBP5.32□□□□□ -1.56
PFDN4-202ENST00000441080 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.32□□□□□ -1.56
PFDN4-202ENST00000441080 MROH8Q9H579 483 aa5.32□□□□□ -1.56
PFDN4-202ENST00000441080 ACTR5Q9H9F9 607 aaPredicted RBP5.32□□□□□ -1.56
PFDN4-202ENST00000441080 WASH6PQ9NQA3 447 aa5.32□□□□□ -1.56
PFDN4-202ENST00000441080 ALKBH4Q9NXW9 302 aa5.32□□□□□ -1.56
PFDN4-202ENST00000441080 TUBA8Q9NY65 449 aaPredicted RBP5.32□□□□□ -1.56
PFDN4-202ENST00000441080 IFT80Q9P2H3 777 aaPredicted RBP5.32□□□□□ -1.56
PFDN4-202ENST00000441080 PGAP2Q9UHJ9 254 aa5.32□□□□□ -1.56
PFDN4-202ENST00000441080 DHDHQ9UQ10 334 aa5.32□□□□□ -1.56
PFDN4-202ENST00000441080 CRYL1Q9Y2S2 319 aa5.32□□□□□ -1.56
PFDN4-202ENST00000441080 DNAJC9-AS1A6NH13 148 aa5.31□□□□□ -1.56
PFDN4-202ENST00000441080 SH2D7A6NKC9 451 aaPredicted RBP5.31□□□□□ -1.56
PFDN4-202ENST00000441080 EYA2O00167 538 aa5.31□□□□□ -1.56
PFDN4-202ENST00000441080 FGBP02675 491 aa5.31□□□□□ -1.56
PFDN4-202ENST00000441080 IFIT1P09914 478 aaKnown RBP5.31□□□□□ -1.56
PFDN4-202ENST00000441080 PSMC2P35998 433 aaKnown RBP5.31□□□□□ -1.56
PFDN4-202ENST00000441080 PGM1P36871 562 aa5.31□□□□□ -1.56
PFDN4-202ENST00000441080 MTNR1AP48039 350 aa5.31□□□□□ -1.56
PFDN4-202ENST00000441080 MAPK7Q13164 816 aa5.31□□□□□ -1.56
PFDN4-202ENST00000441080 MTX1Q13505 466 aa5.31□□□□□ -1.56
PFDN4-202ENST00000441080 SMTNL2Q2TAL5 461 aa5.31□□□□□ -1.56
PFDN4-202ENST00000441080 C6orf10Q5SRN2 563 aa5.31□□□□□ -1.56
PFDN4-202ENST00000441080 PXDC1Q5TGL8 231 aa5.31□□□□□ -1.56
PFDN4-202ENST00000441080 RETSATQ6NUM9 610 aa5.31□□□□□ -1.56
PFDN4-202ENST00000441080 GJB7Q6PEY0 223 aa5.31□□□□□ -1.56
PFDN4-202ENST00000441080 NANOGP1Q8N7R0 232 aa5.31□□□□□ -1.56
PFDN4-202ENST00000441080 C16orf52Q8NHV5 167 aa5.31□□□□□ -1.56
PFDN4-202ENST00000441080 HTRA1Q92743 480 aa5.31□□□□□ -1.56
PFDN4-202ENST00000441080 FRG2BQ96QU4 278 aa5.31□□□□□ -1.56
PFDN4-202ENST00000441080 EIF2AK1Q9BQI3 630 aaKnown RBP5.31□□□□□ -1.56
PFDN4-202ENST00000441080 TAOK3Q9H2K8 898 aa5.31□□□□□ -1.56
PFDN4-202ENST00000441080 HIPK3Q9H422 1215 aa5.31□□□□□ -1.56
PFDN4-202ENST00000441080 TTC12Q9H892 705 aaPredicted RBP5.31□□□□□ -1.56
PFDN4-202ENST00000441080 SPAG4Q9NPE6 437 aa5.31□□□□□ -1.56
PFDN4-202ENST00000441080 MSRB1Q9NZV6 116 aa5.31□□□□□ -1.56
PFDN4-202ENST00000441080 HDAC6Q9UBN7 1215 aa5.31□□□□□ -1.56
PFDN4-202ENST00000441080 SLC13A4Q9UKG4 626 aa5.31□□□□□ -1.56
PFDN4-202ENST00000441080 HSF4Q9ULV5 492 aa5.31□□□□□ -1.56
PFDN4-202ENST00000441080 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.31□□□□□ -1.56
PFDN4-202ENST00000441080 TTBK1Q5TCY1 1321 aaPredicted RBP5.3□□□□□ -1.56
PFDN4-202ENST00000441080 CCDC196A0A1B0GTZ2 297 aa5.3□□□□□ -1.56
PFDN4-202ENST00000441080 OR6C68A6NDL8 312 aa5.3□□□□□ -1.56
PFDN4-202ENST00000441080 OVOL3O00110 214 aa5.3□□□□□ -1.56
PFDN4-202ENST00000441080 TLX3O43711 291 aaPredicted RBP5.3□□□□□ -1.56
PFDN4-202ENST00000441080 CBX6O95503 412 aa5.3□□□□□ -1.56
PFDN4-202ENST00000441080 TOP3BO95985 862 aaKnown RBP5.3□□□□□ -1.56
PFDN4-202ENST00000441080 HNRNPA1P09651 372 aaKnown RBP eCLIP5.3□□□□□ -1.56
PFDN4-202ENST00000441080 SKIV2L2P42285 1042 aaKnown RBP5.3□□□□□ -1.56
PFDN4-202ENST00000441080 GAD2Q05329 585 aa5.3□□□□□ -1.56
PFDN4-202ENST00000441080 RBMS2Q15434 407 aaKnown RBP5.3□□□□□ -1.56
PFDN4-202ENST00000441080 ETFDHQ16134 617 aa5.3□□□□□ -1.56
PFDN4-202ENST00000441080 ENTPD8Q5MY95 495 aa5.3□□□□□ -1.56
PFDN4-202ENST00000441080 TMEM268Q5VZI3 342 aa5.3□□□□□ -1.56
PFDN4-202ENST00000441080 AAGABQ6PD74 315 aa5.3□□□□□ -1.56
PFDN4-202ENST00000441080 LRRC8DQ7L1W4 858 aa5.3□□□□□ -1.56
PFDN4-202ENST00000441080 LSM14AQ8ND56 463 aaKnown RBP5.3□□□□□ -1.56
PFDN4-202ENST00000441080 FAR1Q8WVX9 515 aa5.3□□□□□ -1.56
PFDN4-202ENST00000441080 HVCN1Q96D96 273 aa5.3□□□□□ -1.56
PFDN4-202ENST00000441080 ZFYVE19Q96K21 471 aa5.3□□□□□ -1.56
PFDN4-202ENST00000441080 TEFMQ96QE5 360 aaKnown RBP5.3□□□□□ -1.56
PFDN4-202ENST00000441080 CD180Q99467 661 aa5.3□□□□□ -1.56
PFDN4-202ENST00000441080 WDR83Q9BRX9 315 aaKnown RBP5.3□□□□□ -1.56
PFDN4-202ENST00000441080 TRMOQ9BU70 441 aa5.3□□□□□ -1.56
PFDN4-202ENST00000441080 ZNF70Q9UC06 446 aaPredicted RBP5.3□□□□□ -1.56
PFDN4-202ENST00000441080 ICKQ9UPZ9 632 aa5.3□□□□□ -1.56
PFDN4-202ENST00000441080 A0A0G2JK05 382 aa5.29□□□□□ -1.56
PFDN4-202ENST00000441080 A0A1B0GVC2 190 aa5.29□□□□□ -1.56
PFDN4-202ENST00000441080 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.29□□□□□ -1.56
PFDN4-202ENST00000441080 FAM90A7PA6NKC0 464 aa5.29□□□□□ -1.56
PFDN4-202ENST00000441080 FAM90A22PA8MWA6 464 aa5.29□□□□□ -1.56
PFDN4-202ENST00000441080 FAM90A12PA8MX19 464 aa5.29□□□□□ -1.56
PFDN4-202ENST00000441080 FAM90A23PA8MXZ1 464 aa5.29□□□□□ -1.56
PFDN4-202ENST00000441080 GUCY1B2O75343 617 aa5.29□□□□□ -1.56
PFDN4-202ENST00000441080 DDAH2O95865 285 aa5.29□□□□□ -1.56
PFDN4-202ENST00000441080 PAX3P23760 479 aa5.29□□□□□ -1.56
PFDN4-202ENST00000441080 SLC16A2P36021 539 aa5.29□□□□□ -1.56
PFDN4-202ENST00000441080 POU5F1BQ06416 359 aa5.29□□□□□ -1.56
PFDN4-202ENST00000441080 NAA25Q14CX7 972 aa5.29□□□□□ -1.56
PFDN4-202ENST00000441080 RABEP1Q15276 862 aa5.29□□□□□ -1.56
PFDN4-202ENST00000441080 NFIL3Q16649 462 aa5.29□□□□□ -1.56
PFDN4-202ENST00000441080 PIK3CD-AS1Q5SR53 167 aa5.29□□□□□ -1.56
PFDN4-202ENST00000441080 TTLL5Q6EMB2 1281 aa5.29□□□□□ -1.56
PFDN4-202ENST00000441080 NAPEPLDQ6IQ20 393 aa5.29□□□□□ -1.56
PFDN4-202ENST00000441080 CCDC70Q6NSX1 233 aa5.29□□□□□ -1.56
PFDN4-202ENST00000441080 HMBOX1Q6NT76 420 aa5.29□□□□□ -1.56
PFDN4-202ENST00000441080 KDELC2Q7Z4H8 507 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms