RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 OAZ2O95190 189 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 METTL18O95568 372 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 AP2A1O95782 977 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 FYNP06241 537 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 SRGAP2BP0DMP2 458 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 CREB1P16220 341 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 ERCC2P18074 760 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 TAC1P20366 129 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 ALDH3A1P30838 453 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 CCR1P32246 355 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 GARSP41250 739 aaKnown RBP9.35□□□□□ -0.91
HDAC6-209ENST00000440653 PSEN1P49768 467 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 NEK3P51956 506 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 SLC5A3P53794 718 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 WDR4P57081 412 aaKnown RBP9.35□□□□□ -0.91
HDAC6-209ENST00000440653 SLC20A2Q08357 652 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 PRPSAP1Q14558 356 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 ZKSCAN8Q15776 578 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-209ENST00000440653 TTC31Q49AM3 519 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-209ENST00000440653 SPANXN3Q5MJ09 141 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 HP1BP3Q5SSJ5 553 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-209ENST00000440653 FAXCQ5TGI0 409 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 SYPL2Q5VXT5 272 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 BSPRYQ5W0U4 402 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 TIGD7Q6NT04 549 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-209ENST00000440653 MSANTD2Q6P1R3 559 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 LVRNQ6Q4G3 990 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 UNC5AQ6ZN44 842 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 CTAGE3PQ8IX95 158 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 PYROXD2Q8N2H3 581 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 COLGALT1Q8NBJ5 622 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 OR10T2Q8NGX3 314 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 DEPDC1BQ8WUY9 529 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 TBC1D31Q96DN5 1066 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 SIGLEC10Q96LC7 697 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 C8orf48Q96LL4 319 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 CEP295NLQ96MC4 621 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 SAMD11Q96NU1 681 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 FAM193BQ96PV7 902 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-209ENST00000440653 ELAC2Q9BQ52 826 aaKnown RBP9.35□□□□□ -0.91
HDAC6-209ENST00000440653 PITPNM3Q9BZ71 974 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 WDCPQ9H6R7 721 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 LRRC40Q9H9A6 602 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 RXFP1Q9HBX9 757 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 OLA1Q9NTK5 396 aaKnown RBP9.35□□□□□ -0.91
HDAC6-209ENST00000440653 COMMD8Q9NX08 183 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 NSMCE4AQ9NXX6 385 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 COX16Q9P0S2 106 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 ADAM28Q9UKQ2 775 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 MAD1L1Q9Y6D9 718 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 GREB1Q4ZG55 1949 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 MICAL3Q7RTP6 2002 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 GCN1Q92616 2671 aaKnown RBP9.34□□□□□ -0.91
HDAC6-209ENST00000440653 DOCK4Q8N1I0 1966 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 CYSRT1A8MQ03 144 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 COPEO14579 308 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 HNRNPCL1O60812 293 aaKnown RBP9.34□□□□□ -0.91
HDAC6-209ENST00000440653 EDF1O60869 148 aaKnown RBP9.34□□□□□ -0.91
HDAC6-209ENST00000440653 SPAG7O75391 227 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 ATP5HO75947 161 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 MAP3K6O95382 1288 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 PARNO95453 639 aaKnown RBP9.34□□□□□ -0.91
HDAC6-209ENST00000440653 C1QAP02745 245 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 CXCL10P02778 98 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 ATP5BP06576 529 aaKnown RBP9.34□□□□□ -0.91
HDAC6-209ENST00000440653 POLBP06746 335 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 DHRS4L1P0CG22 281 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 SELPP16109 830 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 SP100P23497 879 aaPredicted RBP9.34□□□□□ -0.91
HDAC6-209ENST00000440653 BDNFP23560 247 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 PTPN3P26045 913 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 PSMB4P28070 264 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 RPA3P35244 121 aaPredicted RBP9.34□□□□□ -0.91
HDAC6-209ENST00000440653 BRCC3P46736 316 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 LIG3P49916 1009 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 NRLP54845 237 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 PITX1P78337 314 aaPredicted RBP9.34□□□□□ -0.91
HDAC6-209ENST00000440653 FAM189BP81408 668 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 WASHC5Q12768 1159 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 ILF2Q12905 390 aaKnown RBP9.34□□□□□ -0.91
HDAC6-209ENST00000440653 MPP2Q14168 576 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 CRYMQ14894 314 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 SETDB1Q15047 1291 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 STXBP5Q5T5C0 1151 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 MANEALQ5VSG8 457 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 BTBD8Q5XKL5 378 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 NAPEPLDQ6IQ20 393 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 CD300LGQ6UXG3 332 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 TIFABQ6ZNK6 161 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 LRRC8DQ7L1W4 858 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 LINC00523Q86TU6 105 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 IGDCC3Q8IVU1 814 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 CCDC117Q8IWD4 279 aaPredicted RBP9.34□□□□□ -0.91
HDAC6-209ENST00000440653 KLHDC8BQ8IXV7 354 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 ABI1Q8IZP0 508 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 ZNF567Q8N184 647 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 TAB3Q8N5C8 712 aaPredicted RBP9.34□□□□□ -0.91
HDAC6-209ENST00000440653 ATPAF2Q8N5M1 289 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 PPM1NQ8N819 430 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 KREMEN2Q8NCW0 462 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms