RNA–Protein interactions for RNA: ENST00000440293.5

HDAC7-213, Transcript of histone deacetylase 7, human

TSL 4

Gene HDAC7, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-213	ENST00000440293	GJB3	O75712	270 aa		18.57	■□□□□ 0.56
HDAC7-213	ENST00000440293	CNTN5	O94779	1100 aa		18.57	■□□□□ 0.56
HDAC7-213	ENST00000440293	ASL	P04424	464 aa		18.57	■□□□□ 0.56
HDAC7-213	ENST00000440293	NDUFV2	P19404	249 aa		18.57	■□□□□ 0.56
HDAC7-213	ENST00000440293	CSK	P41240	450 aa		18.57	■□□□□ 0.56
HDAC7-213	ENST00000440293	IL12RB1	P42701	662 aa		18.57	■□□□□ 0.56
HDAC7-213	ENST00000440293	PLK1	P53350	603 aa		18.57	■□□□□ 0.56
HDAC7-213	ENST00000440293	NRG1	Q02297	640 aa	Predicted RBP	18.57	■□□□□ 0.56
HDAC7-213	ENST00000440293	STARD3	Q14849	445 aa		18.57	■□□□□ 0.56
HDAC7-213	ENST00000440293	ASTE1	Q2TB18	679 aa	Predicted RBP	18.57	■□□□□ 0.56
HDAC7-213	ENST00000440293	FUT11	Q495W5	492 aa		18.57	■□□□□ 0.56
HDAC7-213	ENST00000440293	PITRM1	Q5JRX3	1037 aa		18.57	■□□□□ 0.56
HDAC7-213	ENST00000440293	SLC41A1	Q8IVJ1	513 aa		18.57	■□□□□ 0.56
HDAC7-213	ENST00000440293	CYB5D2	Q8WUJ1	264 aa		18.57	■□□□□ 0.56
HDAC7-213	ENST00000440293	CCDC42	Q96M95	316 aa		18.57	■□□□□ 0.56
HDAC7-213	ENST00000440293	CHP1	Q99653	195 aa		18.57	■□□□□ 0.56
HDAC7-213	ENST00000440293	THAP2	Q9H0W7	228 aa		18.57	■□□□□ 0.56
HDAC7-213	ENST00000440293	PPARGC1A	Q9UBK2	798 aa	Known RBP	18.57	■□□□□ 0.56
HDAC7-213	ENST00000440293	RALY	Q9UKM9	306 aa	Known RBP	18.57	■□□□□ 0.56
HDAC7-213	ENST00000440293	KLK13	Q9UKR3	277 aa		18.57	■□□□□ 0.56
HDAC7-213	ENST00000440293	TBC1D30	Q9Y2I9	924 aa		18.57	■□□□□ 0.56
HDAC7-213	ENST00000440293	CACNA1G	O43497	2377 aa		18.57	■□□□□ 0.56
HDAC7-213	ENST00000440293	ATRX	P46100	2492 aa		18.57	■□□□□ 0.56
HDAC7-213	ENST00000440293	SYNCRIP	O60506	623 aa	Known RBP	18.56	■□□□□ 0.56
HDAC7-213	ENST00000440293	RNF8	O76064	485 aa		18.56	■□□□□ 0.56
HDAC7-213	ENST00000440293	IRAK1	P51617	712 aa		18.56	■□□□□ 0.56
HDAC7-213	ENST00000440293	GALC	P54803	685 aa		18.56	■□□□□ 0.56
HDAC7-213	ENST00000440293	AIF1	P55008	147 aa		18.56	■□□□□ 0.56
HDAC7-213	ENST00000440293	SCAP	Q12770	1279 aa		18.56	■□□□□ 0.56
HDAC7-213	ENST00000440293	PLEKHG6	Q3KR16	790 aa		18.56	■□□□□ 0.56
HDAC7-213	ENST00000440293	FNDC3B	Q53EP0	1204 aa	Known RBP	18.56	■□□□□ 0.56
HDAC7-213	ENST00000440293	ALF	Q53S48	1182 aa		18.56	■□□□□ 0.56
HDAC7-213	ENST00000440293	CXorf57	Q6NSI4	855 aa	Known RBP	18.56	■□□□□ 0.56
HDAC7-213	ENST00000440293	SERPINA13P	Q6UXR4	307 aa		18.56	■□□□□ 0.56
HDAC7-213	ENST00000440293	SETD3	Q86TU7	594 aa	Predicted RBP	18.56	■□□□□ 0.56
HDAC7-213	ENST00000440293	APCDD1	Q8J025	514 aa		18.56	■□□□□ 0.56
HDAC7-213	ENST00000440293	CCDC185	Q8N715	623 aa		18.56	■□□□□ 0.56
HDAC7-213	ENST00000440293	CADM4	Q8NFZ8	388 aa		18.56	■□□□□ 0.56
HDAC7-213	ENST00000440293	MRGPRX1	Q96LB2	322 aa		18.56	■□□□□ 0.56
HDAC7-213	ENST00000440293	HSPA12B	Q96MM6	686 aa		18.56	■□□□□ 0.56
HDAC7-213	ENST00000440293	NCAPG	Q9BPX3	1015 aa		18.56	■□□□□ 0.56
HDAC7-213	ENST00000440293	ZYG11B	Q9C0D3	744 aa		18.56	■□□□□ 0.56
HDAC7-213	ENST00000440293	RETREG1	Q9H6L5	497 aa		18.56	■□□□□ 0.56
HDAC7-213	ENST00000440293	MPP6	Q9NZW5	540 aa		18.56	■□□□□ 0.56
HDAC7-213	ENST00000440293	NENF	Q9UMX5	172 aa		18.56	■□□□□ 0.56
HDAC7-213	ENST00000440293	RAD54B	Q9Y620	910 aa		18.56	■□□□□ 0.56
HDAC7-213	ENST00000440293	MYO18A	Q92614	2054 aa	Known RBP	18.56	■□□□□ 0.56
HDAC7-213	ENST00000440293	WDFY3	Q8IZQ1	3526 aa		18.56	■□□□□ 0.56
HDAC7-213	ENST00000440293	CAPNS1	P04632	268 aa		18.55	■□□□□ 0.56
HDAC7-213	ENST00000440293	CYP1A2	P05177	515 aa		18.55	■□□□□ 0.56
HDAC7-213	ENST00000440293	EPHX1	P07099	455 aa		18.55	■□□□□ 0.56
HDAC7-213	ENST00000440293	MZF1	P28698	734 aa	Predicted RBP	18.55	■□□□□ 0.56
HDAC7-213	ENST00000440293	ST8SIA6	P61647	398 aa		18.55	■□□□□ 0.56
HDAC7-213	ENST00000440293	SULT2A1	Q06520	285 aa		18.55	■□□□□ 0.56
HDAC7-213	ENST00000440293	ACAP1	Q15027	740 aa		18.55	■□□□□ 0.56
HDAC7-213	ENST00000440293	TRIP6	Q15654	476 aa	Known RBP	18.55	■□□□□ 0.56
HDAC7-213	ENST00000440293	PTPRN	Q16849	979 aa		18.55	■□□□□ 0.56
HDAC7-213	ENST00000440293	EFHC2	Q5JST6	749 aa		18.55	■□□□□ 0.56
HDAC7-213	ENST00000440293	ARTN	Q5T4W7	220 aa		18.55	■□□□□ 0.56
HDAC7-213	ENST00000440293	KIAA1211L	Q6NV74	962 aa		18.55	■□□□□ 0.56
HDAC7-213	ENST00000440293	GLRX5	Q86SX6	157 aa		18.55	■□□□□ 0.56
HDAC7-213	ENST00000440293	KDM1B	Q8NB78	822 aa		18.55	■□□□□ 0.56
HDAC7-213	ENST00000440293	ADAMTS14	Q8WXS8	1223 aa		18.55	■□□□□ 0.56
HDAC7-213	ENST00000440293	DNASE2B	Q8WZ79	361 aa		18.55	■□□□□ 0.56
HDAC7-213	ENST00000440293	FEM1A	Q9BSK4	669 aa		18.55	■□□□□ 0.56
HDAC7-213	ENST00000440293	TMEM245	Q9H330	911 aa		18.55	■□□□□ 0.56
HDAC7-213	ENST00000440293	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	18.55	■□□□□ 0.56
HDAC7-213	ENST00000440293	SUN2	Q9UH99	717 aa		18.55	■□□□□ 0.56
HDAC7-213	ENST00000440293	FZD10	Q9ULW2	581 aa		18.55	■□□□□ 0.56
HDAC7-213	ENST00000440293	ERVW-1	Q9UQF0	538 aa		18.55	■□□□□ 0.56
HDAC7-213	ENST00000440293	PCDHB9	Q9Y5E1	797 aa		18.55	■□□□□ 0.56
HDAC7-213	ENST00000440293	DMXL2	Q8TDJ6	3036 aa		18.55	■□□□□ 0.56
HDAC7-213	ENST00000440293	PI4KA	P42356	2102 aa		18.55	■□□□□ 0.56
HDAC7-213	ENST00000440293	AKAP13	Q12802	2813 aa		18.55	■□□□□ 0.56
HDAC7-213	ENST00000440293	PCDH15	Q96QU1	1955 aa		18.54	■□□□□ 0.56
HDAC7-213	ENST00000440293	PKD1L2	Q7Z442	2459 aa		18.54	■□□□□ 0.56
HDAC7-213	ENST00000440293	SRPRA	P08240	638 aa	Known RBP	18.54	■□□□□ 0.56
HDAC7-213	ENST00000440293	ZNF883	P0CG24	379 aa		18.54	■□□□□ 0.56
HDAC7-213	ENST00000440293	CD6	P30203	668 aa		18.54	■□□□□ 0.56
HDAC7-213	ENST00000440293	OXTR	P30559	389 aa		18.54	■□□□□ 0.56
HDAC7-213	ENST00000440293	OR1E1	P30953	314 aa		18.54	■□□□□ 0.56
HDAC7-213	ENST00000440293	L1CAM	P32004	1257 aa		18.54	■□□□□ 0.56
HDAC7-213	ENST00000440293	ECT2L	Q008S8	904 aa		18.54	■□□□□ 0.56
HDAC7-213	ENST00000440293	C6orf118	Q5T5N4	469 aa		18.54	■□□□□ 0.56
HDAC7-213	ENST00000440293	RNF219	Q5W0B1	726 aa	Predicted RBP	18.54	■□□□□ 0.56
HDAC7-213	ENST00000440293	PROSER1	Q86XN7	944 aa		18.54	■□□□□ 0.56
HDAC7-213	ENST00000440293	TC2N	Q8N9U0	490 aa		18.54	■□□□□ 0.56
HDAC7-213	ENST00000440293	ALG14	Q96F25	216 aa		18.54	■□□□□ 0.56
HDAC7-213	ENST00000440293	NUP85	Q9BW27	656 aa		18.54	■□□□□ 0.56
HDAC7-213	ENST00000440293	MAGEB5	Q9BZ81	275 aa		18.54	■□□□□ 0.56
HDAC7-213	ENST00000440293	TRIM7	Q9C029	511 aa		18.54	■□□□□ 0.56
HDAC7-213	ENST00000440293	ITM2C	Q9NQX7	267 aa		18.54	■□□□□ 0.56
HDAC7-213	ENST00000440293	CYP8B1	Q9UNU6	501 aa		18.54	■□□□□ 0.56
HDAC7-213	ENST00000440293		A0A1B0GTW7	788 aa		18.53	■□□□□ 0.56
HDAC7-213	ENST00000440293	FAM72C	H0Y354	149 aa		18.53	■□□□□ 0.56
HDAC7-213	ENST00000440293	RHOC	P08134	193 aa		18.53	■□□□□ 0.56
HDAC7-213	ENST00000440293	H2AFZ	P0C0S5	128 aa		18.53	■□□□□ 0.56
HDAC7-213	ENST00000440293	PRKCH	P24723	683 aa		18.53	■□□□□ 0.56
HDAC7-213	ENST00000440293	NNMT	P40261	264 aa		18.53	■□□□□ 0.56
HDAC7-213	ENST00000440293	PIGH	Q14442	188 aa	Predicted RBP	18.53	■□□□□ 0.56

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms