RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 DEFB118Q96PH6 123 aa14.46□□□□□ -0.09
LIMD1-202ENST00000440097 CFHR5Q9BXR6 569 aa14.46□□□□□ -0.09
LIMD1-202ENST00000440097 UNC93B1Q9H1C4 597 aa14.46□□□□□ -0.09
LIMD1-202ENST00000440097 TAS2R1Q9NYW7 299 aa14.46□□□□□ -0.09
LIMD1-202ENST00000440097 ZNF212Q9UDV6 495 aa14.46□□□□□ -0.09
LIMD1-202ENST00000440097 FETUBQ9UGM5 382 aa14.46□□□□□ -0.09
LIMD1-202ENST00000440097 ADAM28Q9UKQ2 775 aa14.46□□□□□ -0.09
LIMD1-202ENST00000440097 NUP205Q92621 2012 aa14.46□□□□□ -0.1
LIMD1-202ENST00000440097 A0A1W2PQH9 124 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 WDR27A2RRH5 827 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 ENPP3O14638 875 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 ALDH2P05091 517 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 MX2P20592 715 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 CCR1P32246 355 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 MAGEA6P43360 314 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 FAM189BP81408 668 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 ZBTB16Q05516 673 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 FAAP100Q0VG06 881 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 WASHC5Q12768 1159 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 SEMA3BQ13214 749 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 ZNF534Q76KX8 674 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 CASP10Q92851 521 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 LRRC39Q96DD0 335 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 SCLYQ96I15 445 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 EBNA1BP2Q99848 306 aaKnown RBP14.45□□□□□ -0.1
LIMD1-202ENST00000440097 TUBB6Q9BUF5 446 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 UBE2OQ9C0C9 1292 aaKnown RBP14.45□□□□□ -0.1
LIMD1-202ENST00000440097 SF3B1O75533 1304 aaKnown RBP eCLIP14.45□□□□□ -0.1
LIMD1-202ENST00000440097 INPPL1O15357 1258 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 NCAM2O15394 837 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 USP12O75317 370 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 SOAT2O75908 522 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 APOEP02649 317 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 LYNP07948 512 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 CCL23P55773 120 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 SLC26A11Q86WA9 606 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 ZNF276Q8N554 614 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 DNAAF3Q8N9W5 541 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 SLC44A1Q8WWI5 657 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 SEPT8Q92599 483 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 TRIM55Q9BYV6 548 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 NMUR1Q9HB89 426 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 PLAC1Q9HBJ0 212 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 PHF24Q9UPV7 400 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 TSC2P49815 1807 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 IRAK2O43187 625 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 OAZ2O95190 189 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 ESRRAP11474 423 aaPredicted RBP14.45□□□□□ -0.1
LIMD1-202ENST00000440097 ARFIP2P53365 341 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 RASA2Q15283 850 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 CNPY1Q3B7I2 92 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 MGAT5BQ3V5L5 792 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 RASIP1Q5U651 963 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 TRMT10BQ6PF06 316 aaKnown RBP14.45□□□□□ -0.1
LIMD1-202ENST00000440097 NUP93Q8N1F7 819 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 TTC9BQ8N6N2 239 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 GSDMBQ8TAX9 411 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 AZIN2Q96A70 460 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 SIGLEC10Q96LC7 697 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 SEPT5Q99719 369 aaPredicted RBP14.45□□□□□ -0.1
LIMD1-202ENST00000440097 GPR62Q9BZJ7 368 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 IQCGQ9H095 443 aaKnown RBP14.45□□□□□ -0.1
LIMD1-202ENST00000440097 SLC27A5Q9Y2P5 690 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 PCDHB5Q9Y5E4 795 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 CEP290O15078 2479 aa14.45□□□□□ -0.1
LIMD1-202ENST00000440097 C2orf71A6NGG8 1288 aa14.44□□□□□ -0.1
LIMD1-202ENST00000440097 CXorf49A8MYA2 514 aaPredicted RBP14.44□□□□□ -0.1
LIMD1-202ENST00000440097 PAGE1O75459 146 aa14.44□□□□□ -0.1
LIMD1-202ENST00000440097 MGAT1P26572 445 aa14.44□□□□□ -0.1
LIMD1-202ENST00000440097 ERFP50548 548 aa14.44□□□□□ -0.1
LIMD1-202ENST00000440097 OLIG2Q13516 323 aa14.44□□□□□ -0.1
LIMD1-202ENST00000440097 GSTA3Q16772 222 aa14.44□□□□□ -0.1
LIMD1-202ENST00000440097 LRRC23Q53EV4 343 aaPredicted RBP14.44□□□□□ -0.1
LIMD1-202ENST00000440097 ZNF280DQ6N043 979 aa14.44□□□□□ -0.1
LIMD1-202ENST00000440097 FAM126BQ8IXS8 530 aa14.44□□□□□ -0.1
LIMD1-202ENST00000440097 FAM81AQ8TBF8 368 aa14.44□□□□□ -0.1
LIMD1-202ENST00000440097 TCP10LQ8TDR4 215 aa14.44□□□□□ -0.1
LIMD1-202ENST00000440097 USP33Q8TEY7 942 aa14.44□□□□□ -0.1
LIMD1-202ENST00000440097 SKA1Q96BD8 255 aa14.44□□□□□ -0.1
LIMD1-202ENST00000440097 DHRS4Q9BTZ2 278 aa14.44□□□□□ -0.1
LIMD1-202ENST00000440097 TMEM120AQ9BXJ8 343 aa14.44□□□□□ -0.1
LIMD1-202ENST00000440097 SLC17A7Q9P2U7 560 aa14.44□□□□□ -0.1
LIMD1-202ENST00000440097 SDR42E2A6NKP2 422 aa14.44□□□□□ -0.1
LIMD1-202ENST00000440097 TNFRSF10BO14763 440 aa14.44□□□□□ -0.1
LIMD1-202ENST00000440097 LPXNO60711 386 aa14.44□□□□□ -0.1
LIMD1-202ENST00000440097 KRT37O76014 449 aa14.44□□□□□ -0.1
LIMD1-202ENST00000440097 PTPN3P26045 913 aa14.44□□□□□ -0.1
LIMD1-202ENST00000440097 GARSP41250 739 aaKnown RBP14.44□□□□□ -0.1
LIMD1-202ENST00000440097 HCAR3P49019 387 aa14.44□□□□□ -0.1
LIMD1-202ENST00000440097 CDK16Q00536 496 aa14.44□□□□□ -0.1
LIMD1-202ENST00000440097 LGSNQ5TDP6 509 aa14.44□□□□□ -0.1
LIMD1-202ENST00000440097 DEFB128Q7Z7B8 93 aa14.44□□□□□ -0.1
LIMD1-202ENST00000440097 SCD5Q86SK9 330 aa14.44□□□□□ -0.1
LIMD1-202ENST00000440097 TTC7BQ86TV6 843 aa14.44□□□□□ -0.1
LIMD1-202ENST00000440097 FCRL2Q96LA5 508 aaPredicted RBP14.44□□□□□ -0.1
LIMD1-202ENST00000440097 NR1H4Q96RI1 486 aaPredicted RBP14.44□□□□□ -0.1
LIMD1-202ENST00000440097 TUBGCP5Q96RT8 1024 aa14.44□□□□□ -0.1
LIMD1-202ENST00000440097 MANSC1Q9H8J5 431 aa14.44□□□□□ -0.1
LIMD1-202ENST00000440097 UBP1Q9NZI7 540 aa14.44□□□□□ -0.1
LIMD1-202ENST00000440097 EYSQ5T1H1 3165 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms