RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 UNC5BQ8IZJ1 945 aa12.01□□□□□ -0.49
SMAD3-202ENST00000439724 DNAAF3Q8N9W5 541 aa12.01□□□□□ -0.49
SMAD3-202ENST00000439724 PDZD8Q8NEN9 1154 aa12.01□□□□□ -0.49
SMAD3-202ENST00000439724 ACMSDQ8TDX5 336 aa12.01□□□□□ -0.49
SMAD3-202ENST00000439724 USP33Q8TEY7 942 aa12.01□□□□□ -0.49
SMAD3-202ENST00000439724 GIPC2Q8TF65 315 aa12.01□□□□□ -0.49
SMAD3-202ENST00000439724 ZNF419Q96HQ0 510 aaPredicted RBP12.01□□□□□ -0.49
SMAD3-202ENST00000439724 PITPNM3Q9BZ71 974 aa12.01□□□□□ -0.49
SMAD3-202ENST00000439724 KDM4CQ9H3R0 1056 aa12.01□□□□□ -0.49
SMAD3-202ENST00000439724 PRKAG3Q9UGI9 489 aa12.01□□□□□ -0.49
SMAD3-202ENST00000439724 AFF4Q9UHB7 1163 aaKnown RBP12.01□□□□□ -0.49
SMAD3-202ENST00000439724 IPO11Q9UI26 975 aaKnown RBP12.01□□□□□ -0.49
SMAD3-202ENST00000439724 SOX13Q9UN79 622 aa12.01□□□□□ -0.49
SMAD3-202ENST00000439724 ARL2BPQ9Y2Y0 163 aa12.01□□□□□ -0.49
SMAD3-202ENST00000439724 STARD13Q9Y3M8 1113 aa12.01□□□□□ -0.49
SMAD3-202ENST00000439724 HBS1LQ9Y450 684 aaKnown RBP12.01□□□□□ -0.49
SMAD3-202ENST00000439724 ABHD14A-ACY1A0A1B0GW23 586 aa12.01□□□□□ -0.49
SMAD3-202ENST00000439724 ANKRD65E5RJM6 399 aa12.01□□□□□ -0.49
SMAD3-202ENST00000439724 TLR5O60602 858 aa12.01□□□□□ -0.49
SMAD3-202ENST00000439724 SOD2P04179 222 aa12.01□□□□□ -0.49
SMAD3-202ENST00000439724 HLA-DQB2P05538 268 aa12.01□□□□□ -0.49
SMAD3-202ENST00000439724 OR1D2P34982 312 aa12.01□□□□□ -0.49
SMAD3-202ENST00000439724 RNF187Q5TA31 235 aaPredicted RBP12.01□□□□□ -0.49
SMAD3-202ENST00000439724 SNX30Q5VWJ9 437 aa12.01□□□□□ -0.49
SMAD3-202ENST00000439724 FBXL22Q6P050 247 aa12.01□□□□□ -0.49
SMAD3-202ENST00000439724 RASSF3Q86WH2 238 aa12.01□□□□□ -0.49
SMAD3-202ENST00000439724 MIB1Q86YT6 1006 aa12.01□□□□□ -0.49
SMAD3-202ENST00000439724 CCDC117Q8IWD4 279 aaPredicted RBP12.01□□□□□ -0.49
SMAD3-202ENST00000439724 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.01□□□□□ -0.49
SMAD3-202ENST00000439724 SPOCK2Q92563 424 aa12.01□□□□□ -0.49
SMAD3-202ENST00000439724 ZNF75CPQ92670 426 aaPredicted RBP12.01□□□□□ -0.49
SMAD3-202ENST00000439724 ZNF669Q96BR6 464 aaPredicted RBP12.01□□□□□ -0.49
SMAD3-202ENST00000439724 FCRL3Q96P31 734 aaPredicted RBP12.01□□□□□ -0.49
SMAD3-202ENST00000439724 SRPK1Q96SB4 655 aaKnown RBP12.01□□□□□ -0.49
SMAD3-202ENST00000439724 TBL1YQ9BQ87 522 aa12.01□□□□□ -0.49
SMAD3-202ENST00000439724 HERC2P3Q9BVR0 1158 aa12.01□□□□□ -0.49
SMAD3-202ENST00000439724 ACTR5Q9H9F9 607 aaPredicted RBP12.01□□□□□ -0.49
SMAD3-202ENST00000439724 ZNF212Q9UDV6 495 aa12.01□□□□□ -0.49
SMAD3-202ENST00000439724 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12□□□□□ -0.49
SMAD3-202ENST00000439724 ZCWPW2A0A1B0GU75 182 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 CARNS1A5YM72 827 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 ABLIM3O94929 683 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 FSBPO95073 299 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 PEX11BO96011 259 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 CLTBP09497 229 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 GP5P40197 560 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 TNK2Q07912 1038 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 HNRNPDQ14103 355 aaKnown RBP12□□□□□ -0.49
SMAD3-202ENST00000439724 ANKRD20A4Q4UJ75 823 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 ALFQ53S48 1182 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 CERCAMQ5T4B2 595 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 ARMC3Q5W041 872 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 RAP1GAP2Q684P5 730 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 TPGS2Q68CL5 300 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 RNF43Q68DV7 783 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 KIAA1841Q6NSI8 718 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 FAM47EQ6ZV65 393 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 TRPM8Q7Z2W7 1104 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 SLC39A11Q8N1S5 342 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 IGSF8Q969P0 613 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 TOP1MTQ969P6 601 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 ZNF689Q96CS4 500 aaPredicted RBP12□□□□□ -0.49
SMAD3-202ENST00000439724 HMCESQ96FZ2 354 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 ZNF558Q96NG5 402 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 FAM111AQ96PZ2 611 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 CPNE1Q99829 537 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 CLSTN3Q9BQT9 956 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 KIFC1Q9BW19 673 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 IQCGQ9H095 443 aaKnown RBP12□□□□□ -0.49
SMAD3-202ENST00000439724 CCSER2Q9H7U1 834 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 RC3H2Q9HBD1 1191 aaKnown RBP12□□□□□ -0.49
SMAD3-202ENST00000439724 TMEM39AQ9NV64 488 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 RBM22Q9NW64 420 aaKnown RBP eCLIP12□□□□□ -0.494e-8■■■■□ 23.7
SMAD3-202ENST00000439724 ZFATQ9P243 1243 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 PHTF1Q9UMS5 762 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 ATP11BQ9Y2G3 1177 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 PLLPQ9Y342 182 aa12□□□□□ -0.49
SMAD3-202ENST00000439724 ATP9BO43861 1147 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 CNTN5O94779 1100 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 IL1BP01584 269 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 RPL17P18621 184 aaKnown RBP11.99□□□□□ -0.49
SMAD3-202ENST00000439724 CRHR1P34998 444 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 ADRA1AP35348 466 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 MAGEA9P43362 315 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 SERPINB4P48594 390 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 MAPKAPK2P49137 400 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 YBEYP58557 167 aaPredicted RBP11.99□□□□□ -0.49
SMAD3-202ENST00000439724 DSG1Q02413 1049 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 MPP3Q13368 585 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 C5orf22Q49AR2 442 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 GRTP1Q5TC63 336 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 MROH9Q5TGP6 573 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 NADSYN1Q6IA69 706 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 KLHDC10Q6PID8 442 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 CES3Q6UWW8 571 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 CDHR3Q6ZTQ4 885 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 TFAP2DQ7Z6R9 452 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 SPATA22Q8NHS9 363 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 ZNF461Q8TAF7 563 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 DIS3LQ8TF46 1054 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms