RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 PLCL1Q15111 1095 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 NOMO1Q15155 1222 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 GPR107Q5VW38 600 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 WSCD1Q658N2 575 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 PLPPR4Q7Z2D5 763 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 PIGZQ86VD9 579 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 MAPK15Q8TD08 544 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 FOXP3Q9BZS1 431 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 EGFL7Q9UHF1 273 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 PAIP2BQ9ULR5 123 aaKnown RBP10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 PCDHGC3Q9UN70 934 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 TSC22D4Q9Y3Q8 395 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 LAMA3Q16787 3333 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 ZNF839A8K0R7 811 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 DFFAO00273 331 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 ZSCAN9O15535 394 aaPredicted RBP10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 TIPRLO75663 272 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 TFAP2AP05549 437 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 BPGMP07738 259 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 FAM58BPP0C7Q3 252 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 CDK4P11802 303 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 PSMC3P17980 439 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 RXRGP48443 463 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 SERPINB8P50452 374 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 IL1RL1Q01638 556 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 GHRHRQ02643 423 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 FBXO47Q5MNV8 452 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 EXOC8Q8IYI6 725 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 ZNF276Q8N554 614 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 PDZD8Q8NEN9 1154 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 SLC4A5Q9BY07 1137 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 RHOBTB2Q9BYZ6 727 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 TRNAU1APQ9NX07 287 aaKnown RBP10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 DDIT4Q9NX09 232 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 WARS2Q9UGM6 360 aaKnown RBP10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 ZNF232Q9UNY5 417 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 IGKV6D-21A0A0A0MT36 114 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 C1orf232A0A0U1RR37 186 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 SOCS7O14512 581 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 BUD23O43709 281 aaKnown RBP10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 FKBP6O75344 327 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 KCNH1O95259 989 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 SLC5A2P31639 672 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 EPHX2P34913 555 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 ETV4P43268 484 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 IDH3AP50213 366 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 NAGLUP54802 743 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 LSM3P62310 102 aaKnown RBP10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 GSTA3Q16772 222 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 ZIK1Q3SY52 487 aaPredicted RBP10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 HSP90AA5PQ58FG0 334 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 ADGRF2Q8IZF7 708 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 FAM47BQ8NA70 645 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 CMASQ8NFW8 434 aaPredicted RBP10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 FAM110BQ8TC76 370 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 LRTOMTQ8WZ04 291 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 CDKL2Q92772 493 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 DTNBP1Q96EV8 351 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 ZNF778Q96MU6 729 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 PLEKHG4BQ96PX9 1271 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 APBA2Q99767 749 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 TASP1Q9H6P5 420 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 NOL11Q9H8H0 719 aaKnown RBP10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 RRN3Q9NYV6 651 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 PHF24Q9UPV7 400 aa10.13□□□□□ -0.79
CDC42SE1-202ENST00000439374 KPNA7A9QM74 516 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 TK2O00142 265 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 RNF103O00237 685 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 TOR1BO14657 336 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 NDC80O14777 642 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 VILLO15195 856 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 FAM189A1O60320 539 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 LTFP02788 710 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 USP17L7P0C7H9 530 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 HNRNPLP14866 589 aaKnown RBP eCLIP10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 CRABP2P29373 138 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 RGS2P41220 211 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 ARHGAP1Q07960 439 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 SLC10A2Q12908 348 aaPredicted RBP10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 LPIN1Q14693 890 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 ZNF484Q5JVG2 852 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 GK5Q6ZS86 529 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 CDKL3Q8IVW4 592 aaPredicted RBP10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 SCN4BQ8IWT1 228 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 PLD6Q8N2A8 252 aaKnown RBP10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 TSPAN14Q8NG11 270 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 OR52K1Q8NGK4 314 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 KCNK16Q96T55 309 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 LHX5Q9H2C1 402 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 PRDM12Q9H4Q4 367 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 ASB7Q9H672 318 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 TLE6Q9H808 572 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 HSFX1Q9UBD0 423 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 TRIM43BA6NCK2 446 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 C3orf70A6NLC5 250 aaPredicted RBP10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 MEIS3P2A8K0S8 358 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 ABLIM1O14639 778 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 NRP1O14786 923 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 TREHO43280 583 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms