RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 PRDM6Q9NQX0 595 aa21.16■□□□□ 0.98
CHD3-204ENST00000439235 ABCB8Q9NUT2 735 aa21.16■□□□□ 0.98
CHD3-204ENST00000439235 GGA2Q9UJY4 613 aa21.16■□□□□ 0.98
CHD3-204ENST00000439235 FBXO10Q9UK96 956 aa21.16■□□□□ 0.98
CHD3-204ENST00000439235 CLEC4EQ9ULY5 219 aa21.16■□□□□ 0.98
CHD3-204ENST00000439235 OR51B4Q9Y5P0 310 aa21.16■□□□□ 0.98
CHD3-204ENST00000439235 ZSCAN5CA6NGD5 496 aaPredicted RBP21.15■□□□□ 0.98
CHD3-204ENST00000439235 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.15■□□□□ 0.98
CHD3-204ENST00000439235 ARNTLO00327 626 aa21.15■□□□□ 0.98
CHD3-204ENST00000439235 MATN3O15232 486 aa21.15■□□□□ 0.98
CHD3-204ENST00000439235 RAD51CO43502 376 aa21.15■□□□□ 0.98
CHD3-204ENST00000439235 KDELR3O43731 214 aa21.15■□□□□ 0.98
CHD3-204ENST00000439235 PRAMEF11O60813 436 aa21.15■□□□□ 0.98
CHD3-204ENST00000439235 IFNB1P01574 187 aa21.15■□□□□ 0.98
CHD3-204ENST00000439235 MZF1P28698 734 aaPredicted RBP21.15■□□□□ 0.98
CHD3-204ENST00000439235 HLA-FP30511 346 aa21.15■□□□□ 0.98
CHD3-204ENST00000439235 CD70P32970 193 aa21.15■□□□□ 0.98
CHD3-204ENST00000439235 ACTN2P35609 894 aa21.15■□□□□ 0.98
CHD3-204ENST00000439235 PTGIRP43119 386 aa21.15■□□□□ 0.98
CHD3-204ENST00000439235 DGKGP49619 791 aa21.15■□□□□ 0.98
CHD3-204ENST00000439235 PLK1P53350 603 aa21.15■□□□□ 0.98
CHD3-204ENST00000439235 PLEKHG6Q3KR16 790 aa21.15■□□□□ 0.98
CHD3-204ENST00000439235 B4GALNT4Q76KP1 1039 aa21.15■□□□□ 0.98
CHD3-204ENST00000439235 JAMLQ86YT9 394 aa21.15■□□□□ 0.98
CHD3-204ENST00000439235 ETFBKMTQ8IXQ9 262 aa21.15■□□□□ 0.98
CHD3-204ENST00000439235 NAT16Q8N8M0 369 aa21.15■□□□□ 0.98
CHD3-204ENST00000439235 CCHCR1Q8TD31 782 aa21.15■□□□□ 0.98
CHD3-204ENST00000439235 WFIKKN2Q8TEU8 576 aa21.15■□□□□ 0.98
CHD3-204ENST00000439235 LRRN4Q8WUT4 740 aa21.15■□□□□ 0.98
CHD3-204ENST00000439235 RTP4Q96DX8 246 aa21.15■□□□□ 0.98
CHD3-204ENST00000439235 LMLNQ96KR4 655 aa21.15■□□□□ 0.98
CHD3-204ENST00000439235 ZNF599Q96NL3 588 aa21.15■□□□□ 0.98
CHD3-204ENST00000439235 VAT1Q99536 393 aa21.15■□□□□ 0.98
CHD3-204ENST00000439235 C10orf88Q9H8K7 445 aa21.15■□□□□ 0.98
CHD3-204ENST00000439235 SEPT10Q9P0V9 454 aa21.15■□□□□ 0.98
CHD3-204ENST00000439235 LOC730098B7Z3J9 87 aa21.14■□□□□ 0.97
CHD3-204ENST00000439235 TTI1O43156 1089 aa21.14■□□□□ 0.97
CHD3-204ENST00000439235 GJA4P35212 333 aa21.14■□□□□ 0.97
CHD3-204ENST00000439235 EIF2DP41214 584 aaKnown RBP21.14■□□□□ 0.97
CHD3-204ENST00000439235 CLCN6P51797 869 aa21.14■□□□□ 0.97
CHD3-204ENST00000439235 IFI35P80217 286 aaPredicted RBP21.14■□□□□ 0.97
CHD3-204ENST00000439235 GAB4Q2WGN9 574 aa21.14■□□□□ 0.97
CHD3-204ENST00000439235 P3H1Q32P28 736 aa21.14■□□□□ 0.97
CHD3-204ENST00000439235 PREPLQ4J6C6 727 aaPredicted RBP21.14■□□□□ 0.97
CHD3-204ENST00000439235 PITRM1Q5JRX3 1037 aa21.14■□□□□ 0.97
CHD3-204ENST00000439235 GRAMD4Q6IC98 578 aa21.14■□□□□ 0.97
CHD3-204ENST00000439235 AHI1Q8N157 1196 aa21.14■□□□□ 0.97
CHD3-204ENST00000439235 SLC44A3Q8N4M1 653 aa21.14■□□□□ 0.97
CHD3-204ENST00000439235 DNASE1L2Q92874 299 aa21.14■□□□□ 0.97
CHD3-204ENST00000439235 ACDQ96AP0 544 aa21.14■□□□□ 0.97
CHD3-204ENST00000439235 ALG14Q96F25 216 aa21.14■□□□□ 0.97
CHD3-204ENST00000439235 LRRC1Q9BTT6 524 aa21.14■□□□□ 0.97
CHD3-204ENST00000439235 RAB17Q9H0T7 212 aa21.14■□□□□ 0.97
CHD3-204ENST00000439235 USP29Q9HBJ7 922 aa21.14■□□□□ 0.97
CHD3-204ENST00000439235 PCDH9Q9HC56 1237 aa21.14■□□□□ 0.97
CHD3-204ENST00000439235 TRPV5Q9NQA5 729 aa21.14■□□□□ 0.97
CHD3-204ENST00000439235 HAUS2Q9NVX0 235 aa21.14■□□□□ 0.97
CHD3-204ENST00000439235 GTSE1Q9NYZ3 720 aa21.14■□□□□ 0.97
CHD3-204ENST00000439235 DEC1Q9P2X7 70 aa21.14■□□□□ 0.97
CHD3-204ENST00000439235 PRKAG3Q9UGI9 489 aa21.14■□□□□ 0.97
CHD3-204ENST00000439235 SLC27A6Q9Y2P4 619 aa21.14■□□□□ 0.97
CHD3-204ENST00000439235 CXorf51AA0A1B0GTR3 108 aa21.13■□□□□ 0.97
CHD3-204ENST00000439235 C5orf60A6NFR6 353 aa21.13■□□□□ 0.97
CHD3-204ENST00000439235 OTOL1A6NHN0 477 aaPredicted RBP21.13■□□□□ 0.97
CHD3-204ENST00000439235 J3KR12 359 aa21.13■□□□□ 0.97
CHD3-204ENST00000439235 KCNK1O00180 336 aa21.13■□□□□ 0.97
CHD3-204ENST00000439235 RNF103O00237 685 aa21.13■□□□□ 0.97
CHD3-204ENST00000439235 CBX4O00257 560 aa21.13■□□□□ 0.97
CHD3-204ENST00000439235 TULP3O75386 442 aa21.13■□□□□ 0.97
CHD3-204ENST00000439235 NEBLO76041 1014 aa21.13■□□□□ 0.97
CHD3-204ENST00000439235 KRT14P02533 472 aa21.13■□□□□ 0.97
CHD3-204ENST00000439235 GDF10P55107 478 aa21.13■□□□□ 0.97
CHD3-204ENST00000439235 GEMIN4P57678 1058 aaKnown RBP21.13■□□□□ 0.97
CHD3-204ENST00000439235 PTK6Q13882 451 aa21.13■□□□□ 0.97
CHD3-204ENST00000439235 FUT11Q495W5 492 aa21.13■□□□□ 0.97
CHD3-204ENST00000439235 TMCO4Q5TGY1 634 aa21.13■□□□□ 0.97
CHD3-204ENST00000439235 C12orf40Q86WS4 652 aa21.13■□□□□ 0.97
CHD3-204ENST00000439235 ADHFE1Q8IWW8 467 aa21.13■□□□□ 0.97
CHD3-204ENST00000439235 BBS5Q8N3I7 341 aa21.13■□□□□ 0.97
CHD3-204ENST00000439235 UBXN4Q92575 508 aa21.13■□□□□ 0.97
CHD3-204ENST00000439235 MAML1Q92585 1016 aa21.13■□□□□ 0.97
CHD3-204ENST00000439235 PDFQ9HBH1 243 aa21.13■□□□□ 0.97
CHD3-204ENST00000439235 UBA2Q9UBT2 640 aaPredicted RBP21.13■□□□□ 0.97
CHD3-204ENST00000439235 COL4A3Q01955 1670 aa21.12■□□□□ 0.97
CHD3-204ENST00000439235 A0A0A0MRY4 1105 aa21.12■□□□□ 0.97
CHD3-204ENST00000439235 OPHN1O60890 802 aa21.12■□□□□ 0.97
CHD3-204ENST00000439235 CISD3P0C7P0 127 aa21.12■□□□□ 0.97
CHD3-204ENST00000439235 CCNB1P14635 433 aa21.12■□□□□ 0.97
CHD3-204ENST00000439235 PTPN3P26045 913 aa21.12■□□□□ 0.97
CHD3-204ENST00000439235 RENBPP51606 427 aa21.12■□□□□ 0.97
CHD3-204ENST00000439235 SULT2A1Q06520 285 aa21.12■□□□□ 0.97
CHD3-204ENST00000439235 HNRNPDQ14103 355 aaKnown RBP21.12■□□□□ 0.97
CHD3-204ENST00000439235 RFTN1Q14699 578 aaPredicted RBP21.12■□□□□ 0.97
CHD3-204ENST00000439235 ASTLQ6HA08 431 aaPredicted RBP21.12■□□□□ 0.97
CHD3-204ENST00000439235 RETSATQ6NUM9 610 aa21.12■□□□□ 0.97
CHD3-204ENST00000439235 C4orf22Q6V702 233 aa21.12■□□□□ 0.97
CHD3-204ENST00000439235 KIAA0907Q7Z7F0 614 aaPredicted RBP21.12■□□□□ 0.97
CHD3-204ENST00000439235 APCDD1Q8J025 514 aa21.12■□□□□ 0.97
CHD3-204ENST00000439235 TTC8Q8TAM2 541 aa21.12■□□□□ 0.97
CHD3-204ENST00000439235 SPATA13Q96N96 652 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms