RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 HOXD13P35453 343 aa11.52□□□□□ -0.57
CSTF3-203ENST00000438862 TXLNAP40222 546 aa11.52□□□□□ -0.57
CSTF3-203ENST00000438862 CASRP41180 1078 aa11.52□□□□□ -0.57
CSTF3-203ENST00000438862 HNRNPKP61978 463 aaKnown RBP eCLIP11.52□□□□□ -0.57
CSTF3-203ENST00000438862 EIF3IQ13347 325 aaKnown RBP11.52□□□□□ -0.57
CSTF3-203ENST00000438862 ELAVL3Q14576 367 aaKnown RBP11.52□□□□□ -0.57
CSTF3-203ENST00000438862 NCAPHQ15003 741 aa11.52□□□□□ -0.57
CSTF3-203ENST00000438862 IGFBP7Q16270 282 aa11.52□□□□□ -0.57
CSTF3-203ENST00000438862 PIK3R6Q5UE93 754 aa11.52□□□□□ -0.57
CSTF3-203ENST00000438862 RESP18Q5W5W9 173 aa11.52□□□□□ -0.57
CSTF3-203ENST00000438862 EFL1Q7Z2Z2 1120 aaKnown RBP11.52□□□□□ -0.57
CSTF3-203ENST00000438862 DCP2Q8IU60 420 aaKnown RBP11.52□□□□□ -0.57
CSTF3-203ENST00000438862 MFN1Q8IWA4 741 aa11.52□□□□□ -0.57
CSTF3-203ENST00000438862 CCDC117Q8IWD4 279 aaPredicted RBP11.52□□□□□ -0.57
CSTF3-203ENST00000438862 STK40Q8N2I9 435 aa11.52□□□□□ -0.57
CSTF3-203ENST00000438862 TMEM145Q8NBT3 493 aa11.52□□□□□ -0.57
CSTF3-203ENST00000438862 FAM174AQ8TBP5 190 aa11.52□□□□□ -0.57
CSTF3-203ENST00000438862 ZNF507Q8TCN5 953 aa11.52□□□□□ -0.57
CSTF3-203ENST00000438862 WFDC5Q8TCV5 224 aa11.52□□□□□ -0.57
CSTF3-203ENST00000438862 LIN37Q96GY3 246 aaPredicted RBP11.52□□□□□ -0.57
CSTF3-203ENST00000438862 NT5C1AQ9BXI3 368 aa11.52□□□□□ -0.57
CSTF3-203ENST00000438862 GDPD2Q9HCC8 539 aa11.52□□□□□ -0.57
CSTF3-203ENST00000438862 AGPAT3Q9NRZ7 376 aa11.52□□□□□ -0.57
CSTF3-203ENST00000438862 FAM13BQ9NYF5 915 aa11.52□□□□□ -0.57
CSTF3-203ENST00000438862 SALL4Q9UJQ4 1053 aa11.52□□□□□ -0.57
CSTF3-203ENST00000438862 ANAPC2Q9UJX6 822 aa11.52□□□□□ -0.57
CSTF3-203ENST00000438862 CSNK1G3Q9Y6M4 447 aa11.52□□□□□ -0.57
CSTF3-203ENST00000438862 PMS2P1A4D2B8 440 aa11.51□□□□□ -0.57
CSTF3-203ENST00000438862 TMX2-CTNND1H3BSU7 103 aa11.51□□□□□ -0.57
CSTF3-203ENST00000438862 PLD2O14939 933 aa11.51□□□□□ -0.57
CSTF3-203ENST00000438862 CLIC2O15247 247 aa11.51□□□□□ -0.57
CSTF3-203ENST00000438862 TGFB1I1O43294 461 aa11.51□□□□□ -0.57
CSTF3-203ENST00000438862 WIPF1O43516 503 aa11.51□□□□□ -0.57
CSTF3-203ENST00000438862 RTN2O75298 545 aa11.51□□□□□ -0.57
CSTF3-203ENST00000438862 MOCS3O95396 460 aa11.51□□□□□ -0.57
CSTF3-203ENST00000438862 NNMTP40261 264 aa11.51□□□□□ -0.57
CSTF3-203ENST00000438862 CYP2J2P51589 502 aa11.51□□□□□ -0.57
CSTF3-203ENST00000438862 SGSHP51688 502 aa11.51□□□□□ -0.57
CSTF3-203ENST00000438862 CLDN10P78369 228 aa11.51□□□□□ -0.57
CSTF3-203ENST00000438862 ECT2LQ008S8 904 aa11.51□□□□□ -0.57
CSTF3-203ENST00000438862 INCA1Q0VD86 236 aa11.51□□□□□ -0.57
CSTF3-203ENST00000438862 TGIF1Q15583 401 aa11.51□□□□□ -0.57
CSTF3-203ENST00000438862 CDKN3Q16667 212 aa11.51□□□□□ -0.57
CSTF3-203ENST00000438862 POM121L1PQ3SYA9 428 aa11.51□□□□□ -0.57
CSTF3-203ENST00000438862 MANEAQ5SRI9 462 aa11.51□□□□□ -0.57
CSTF3-203ENST00000438862 FAM46CQ5VWP2 391 aa11.51□□□□□ -0.57
CSTF3-203ENST00000438862 RNF219Q5W0B1 726 aaPredicted RBP11.51□□□□□ -0.57
CSTF3-203ENST00000438862 SHC4Q6S5L8 630 aa11.51□□□□□ -0.57
CSTF3-203ENST00000438862 DSG4Q86SJ6 1040 aa11.51□□□□□ -0.57
CSTF3-203ENST00000438862 PTRH1Q86Y79 214 aaKnown RBP11.51□□□□□ -0.57
CSTF3-203ENST00000438862 RNF139Q8WU17 664 aa11.51□□□□□ -0.57
CSTF3-203ENST00000438862 PTPRN2Q92932 1015 aa11.51□□□□□ -0.57
CSTF3-203ENST00000438862 SRRTQ9BXP5 876 aaKnown RBP11.51□□□□□ -0.57
CSTF3-203ENST00000438862 PREBQ9HCU5 417 aa11.51□□□□□ -0.57
CSTF3-203ENST00000438862 LMBRD1Q9NUN5 540 aa11.51□□□□□ -0.57
CSTF3-203ENST00000438862 CGNQ9P2M7 1197 aaKnown RBP11.51□□□□□ -0.57
CSTF3-203ENST00000438862 USP25Q9UHP3 1055 aa11.51□□□□□ -0.57
CSTF3-203ENST00000438862 INTS6Q9UL03 887 aaKnown RBP11.51□□□□□ -0.57
CSTF3-203ENST00000438862 TYW5A2RUC4 315 aaKnown RBP11.5□□□□□ -0.57
CSTF3-203ENST00000438862 NVLO15381 856 aaKnown RBP11.5□□□□□ -0.57
CSTF3-203ENST00000438862 VNN1O95497 513 aa11.5□□□□□ -0.57
CSTF3-203ENST00000438862 SPIDRQ14159 915 aa11.5□□□□□ -0.57
CSTF3-203ENST00000438862 CLCA4Q14CN2 919 aa11.5□□□□□ -0.57
CSTF3-203ENST00000438862 SKIDA1Q1XH10 827 aa11.5□□□□□ -0.57
CSTF3-203ENST00000438862 RAB41Q5JT25 222 aa11.5□□□□□ -0.57
CSTF3-203ENST00000438862 PM20D1Q6GTS8 502 aa11.5□□□□□ -0.57
CSTF3-203ENST00000438862 NEK5Q6P3R8 708 aa11.5□□□□□ -0.57
CSTF3-203ENST00000438862 GUSBP11Q6P575 273 aa11.5□□□□□ -0.57
CSTF3-203ENST00000438862 CCDC73Q6ZRK6 1079 aa11.5□□□□□ -0.57
CSTF3-203ENST00000438862 UNC45BQ8IWX7 931 aa11.5□□□□□ -0.57
CSTF3-203ENST00000438862 FBXO39Q8N4B4 442 aa11.5□□□□□ -0.57
CSTF3-203ENST00000438862 PARD3BQ8TEW8 1205 aa11.5□□□□□ -0.57
CSTF3-203ENST00000438862 GLMNQ92990 594 aa11.5□□□□□ -0.57
CSTF3-203ENST00000438862 AZIN2Q96A70 460 aa11.5□□□□□ -0.57
CSTF3-203ENST00000438862 ELMO3Q96BJ8 720 aa11.5□□□□□ -0.57
CSTF3-203ENST00000438862 CLIC6Q96NY7 704 aa11.5□□□□□ -0.57
CSTF3-203ENST00000438862 SPAG5Q96R06 1193 aa11.5□□□□□ -0.57
CSTF3-203ENST00000438862 CALN1Q9BXU9 219 aa11.5□□□□□ -0.57
CSTF3-203ENST00000438862 CUEDC2Q9H467 287 aa11.5□□□□□ -0.57
CSTF3-203ENST00000438862 DNAJC28Q9NX36 388 aa11.5□□□□□ -0.57
CSTF3-203ENST00000438862 PLEKHB1Q9UF11 243 aaPredicted RBP11.5□□□□□ -0.57
CSTF3-203ENST00000438862 SLCO3A1Q9UIG8 710 aa11.5□□□□□ -0.57
CSTF3-203ENST00000438862 TUBD1Q9UJT1 453 aa11.5□□□□□ -0.57
CSTF3-203ENST00000438862 HPSEQ9Y251 543 aa11.5□□□□□ -0.57
CSTF3-203ENST00000438862 CA5BQ9Y2D0 317 aa11.5□□□□□ -0.57
CSTF3-203ENST00000438862 CEP83Q9Y592 693 aa11.5□□□□□ -0.57
CSTF3-203ENST00000438862 NYNRINQ9P2P1 1898 aaKnown RBP11.5□□□□□ -0.57
CSTF3-203ENST00000438862 H3BM21 787 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 TPP1O14773 563 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 SLC31A1O15431 190 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 NEBLO76041 1014 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 MBD3O95983 291 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 ZBED1O96006 694 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 ASS1P00966 412 aaKnown RBP11.49□□□□□ -0.57
CSTF3-203ENST00000438862 AKT2P31751 481 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 UGT1A5P35504 534 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 ASPAP45381 313 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 SLC11A2P49281 568 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 CASP4P49662 377 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 RIPPLY3P57055 190 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms