RNA–Protein interactions for RNA: ENST00000438013.3

GPR35-205, Transcript of G protein-coupled receptor 35, human

APPRIS P3 BASIC

Gene GPR35, Length 3,821 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPR35-205	ENST00000438013	PPP1R8	Q12972	351 aa	Known RBP	13.6	□□□□□ -0.23
GPR35-205	ENST00000438013	MSLN	Q13421	630 aa	Predicted RBP	13.6	□□□□□ -0.23
GPR35-205	ENST00000438013	MADCAM1	Q13477	382 aa		13.6	□□□□□ -0.23
GPR35-205	ENST00000438013	TRIM60	Q495X7	471 aa		13.6	□□□□□ -0.23
GPR35-205	ENST00000438013	TNFAIP8L3	Q5GJ75	292 aa		13.6	□□□□□ -0.23
GPR35-205	ENST00000438013	ARL13A	Q5H913	290 aa	Predicted RBP	13.6	□□□□□ -0.23
GPR35-205	ENST00000438013	PDZD4	Q76G19	769 aa	Predicted RBP	13.6	□□□□□ -0.23
GPR35-205	ENST00000438013	TAS2R42	Q7RTR8	314 aa		13.6	□□□□□ -0.23
GPR35-205	ENST00000438013	SPPL2C	Q8IUH8	684 aa		13.6	□□□□□ -0.23
GPR35-205	ENST00000438013	PCYOX1L	Q8NBM8	494 aa		13.6	□□□□□ -0.23
GPR35-205	ENST00000438013	VCPIP1	Q96JH7	1222 aa		13.6	□□□□□ -0.23
GPR35-205	ENST00000438013	MRPL4	Q9BYD3	311 aa	Known RBP	13.6	□□□□□ -0.23
GPR35-205	ENST00000438013	C20orf27	Q9GZN8	174 aa		13.6	□□□□□ -0.23
GPR35-205	ENST00000438013	VPS33B	Q9H267	617 aa		13.6	□□□□□ -0.23
GPR35-205	ENST00000438013	TLE6	Q9H808	572 aa		13.6	□□□□□ -0.23
GPR35-205	ENST00000438013	GGA3	Q9NZ52	723 aa		13.6	□□□□□ -0.23
GPR35-205	ENST00000438013	COPG2	Q9UBF2	871 aa		13.6	□□□□□ -0.23
GPR35-205	ENST00000438013	STK39	Q9UEW8	545 aa		13.6	□□□□□ -0.23
GPR35-205	ENST00000438013	TMEM233	B4DJY2	109 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013		K7EPI3	171 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	DFFA	O00273	331 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	HDAC3	O15379	428 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	CCNA2	P20248	432 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	EIF4B	P23588	611 aa	Known RBP	13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	PSMB4	P28070	264 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	CAPRIN1	Q14444	709 aa	Known RBP	13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	MAPRE2	Q15555	327 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	RAVER1	Q8IY67	606 aa	Known RBP	13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	FNDC8	Q8TC99	324 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	ZNF516	Q92618	1163 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	TAMM41	Q96BW9	452 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	CNPY3	Q9BT09	278 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	FSD1L	Q9BXM9	530 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	TRIM8	Q9BZR9	551 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	SORCS3	Q9UPU3	1222 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	CCDC159	P0C7I6	412 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	GMPS	P49915	693 aa	Predicted RBP	13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	GOLGA7B	Q2TAP0	167 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	BOLA3	Q53S33	107 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	FBXO48	Q5FWF7	155 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	SCIMP	Q6UWF3	145 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	ARC	Q7LC44	396 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	SYTL1	Q8IYJ3	562 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	ACE2	Q9BYF1	805 aa	Predicted RBP	13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	GPRC5D	Q9NZD1	345 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	SEPT3	Q9UH03	358 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	RAB26	Q9ULW5	256 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	MYO1G	B0I1T2	1018 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013		H0Y626	953 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	MATN2	O00339	956 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	TRIM16	O95361	564 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	CRHR1	P34998	444 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	TUFM	P49411	452 aa	Known RBP	13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	DNASE1L3	Q13609	305 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	TRAF7	Q6Q0C0	670 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	PHF13	Q86YI8	300 aa	Predicted RBP	13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	ACTRT2	Q8TDY3	377 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	GAB3	Q8WWW8	586 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	GATA5	Q9BWX5	397 aa	Predicted RBP	13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	FRMD8	Q9BZ67	464 aa	Predicted RBP	13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	ROGDI	Q9GZN7	287 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	C6orf62	Q9GZU0	229 aa	Predicted RBP	13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	AGO4	Q9HCK5	861 aa	Known RBP	13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	CNGB3	Q9NQW8	809 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	FZD1	Q9UP38	647 aa		13.59	□□□□□ -0.23
GPR35-205	ENST00000438013	NCF1B	A6NI72	391 aa	Predicted RBP	13.58	□□□□□ -0.23
GPR35-205	ENST00000438013	NCF1C	A8MVU1	366 aa	Predicted RBP	13.58	□□□□□ -0.23
GPR35-205	ENST00000438013	SNHG28	P0DPA3	235 aa		13.58	□□□□□ -0.23
GPR35-205	ENST00000438013	CXCL8	P10145	99 aa		13.58	□□□□□ -0.23
GPR35-205	ENST00000438013	NCF1	P14598	390 aa	Predicted RBP	13.58	□□□□□ -0.23
GPR35-205	ENST00000438013	PTPN7	P35236	360 aa		13.58	□□□□□ -0.23
GPR35-205	ENST00000438013	NKX2-5	P52952	324 aa	Predicted RBP	13.58	□□□□□ -0.23
GPR35-205	ENST00000438013	CDH13	P55290	713 aa		13.58	□□□□□ -0.23
GPR35-205	ENST00000438013	ADAM17	P78536	824 aa		13.58	□□□□□ -0.23
GPR35-205	ENST00000438013	SAMD7	Q7Z3H4	446 aa		13.58	□□□□□ -0.23
GPR35-205	ENST00000438013	RAB44	Q7Z6P3	723 aa	Predicted RBP	13.58	□□□□□ -0.23
GPR35-205	ENST00000438013	CENPS	Q8N2Z9	138 aa		13.58	□□□□□ -0.23
GPR35-205	ENST00000438013	C12orf29	Q8N999	325 aa		13.58	□□□□□ -0.23
GPR35-205	ENST00000438013	DQX1	Q8TE96	717 aa	Known RBP	13.58	□□□□□ -0.23
GPR35-205	ENST00000438013	PLEKHA8	Q96JA3	519 aa		13.58	□□□□□ -0.23
GPR35-205	ENST00000438013	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.58	□□□□□ -0.23
GPR35-205	ENST00000438013	SH3GL1	Q99961	368 aa		13.58	□□□□□ -0.23
GPR35-205	ENST00000438013	CDH19	Q9H159	772 aa		13.58	□□□□□ -0.23
GPR35-205	ENST00000438013	ZNF408	Q9H9D4	720 aa		13.58	□□□□□ -0.23
GPR35-205	ENST00000438013	SACM1L	Q9NTJ5	587 aa		13.58	□□□□□ -0.23
GPR35-205	ENST00000438013	CIDEB	Q9UHD4	219 aa		13.58	□□□□□ -0.23
GPR35-205	ENST00000438013	GPC6	Q9Y625	555 aa	Predicted RBP	13.58	□□□□□ -0.23
GPR35-205	ENST00000438013	DNAH12	Q6ZR08	3092 aa		13.58	□□□□□ -0.24
GPR35-205	ENST00000438013	IGLV3-22	A0A075B6J6	115 aa		13.58	□□□□□ -0.24
GPR35-205	ENST00000438013	UBA6	A0AVT1	1052 aa	Predicted RBP	13.58	□□□□□ -0.24
GPR35-205	ENST00000438013	RNF103	O00237	685 aa		13.58	□□□□□ -0.24
GPR35-205	ENST00000438013	TFEB	P19484	476 aa		13.58	□□□□□ -0.24
GPR35-205	ENST00000438013	XIAP	P98170	497 aa		13.58	□□□□□ -0.24
GPR35-205	ENST00000438013	CDKL1	Q00532	357 aa		13.58	□□□□□ -0.24
GPR35-205	ENST00000438013	PTPN11	Q06124	597 aa	Predicted RBP	13.58	□□□□□ -0.24
GPR35-205	ENST00000438013	PRAMEF18	Q5VWM3	479 aa		13.58	□□□□□ -0.24
GPR35-205	ENST00000438013	RPS27L	Q71UM5	84 aa	Known RBP	13.58	□□□□□ -0.24
GPR35-205	ENST00000438013	ERI1	Q8IV48	349 aa	Known RBP	13.58	□□□□□ -0.24
GPR35-205	ENST00000438013	SLC35B2	Q8TB61	432 aa		13.58	□□□□□ -0.24

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