RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 BMPR2Q13873 1038 aa26.23■■□□□ 1.79
CPNE1-216ENST00000437340 MS4A13Q5J8X5 152 aa26.23■■□□□ 1.79
CPNE1-216ENST00000437340 RNF43Q68DV7 783 aa26.23■■□□□ 1.79
CPNE1-216ENST00000437340 CNKSR3Q6P9H4 555 aa26.23■■□□□ 1.79
CPNE1-216ENST00000437340 PACS1Q6VY07 963 aa26.23■■□□□ 1.79
CPNE1-216ENST00000437340 TAS1R1Q7RTX1 841 aa26.23■■□□□ 1.79
CPNE1-216ENST00000437340 SPOCK2Q92563 424 aa26.23■■□□□ 1.79
CPNE1-216ENST00000437340 CERS2Q96G23 380 aa26.23■■□□□ 1.79
CPNE1-216ENST00000437340 NDFIP2Q9NV92 336 aa26.23■■□□□ 1.79
CPNE1-216ENST00000437340 IGLV3-10A0A075B6K4 115 aa26.22■■□□□ 1.79
CPNE1-216ENST00000437340 USP12O75317 370 aa26.22■■□□□ 1.79
CPNE1-216ENST00000437340 PBX3P40426 434 aa26.22■■□□□ 1.79
CPNE1-216ENST00000437340 ALDH7A1P49419 539 aaKnown RBP26.22■■□□□ 1.79
CPNE1-216ENST00000437340 LIG3P49916 1009 aa26.22■■□□□ 1.79
CPNE1-216ENST00000437340 RING1Q06587 406 aa26.22■■□□□ 1.79
CPNE1-216ENST00000437340 DUSP4Q13115 394 aa26.22■■□□□ 1.79
CPNE1-216ENST00000437340 OLIG2Q13516 323 aa26.22■■□□□ 1.79
CPNE1-216ENST00000437340 ANO4Q32M45 955 aa26.22■■□□□ 1.79
CPNE1-216ENST00000437340 SLC8B1Q6J4K2 584 aa26.22■■□□□ 1.79
CPNE1-216ENST00000437340 UNC5BQ8IZJ1 945 aa26.22■■□□□ 1.79
CPNE1-216ENST00000437340 GBP7Q8N8V2 638 aaPredicted RBP26.22■■□□□ 1.79
CPNE1-216ENST00000437340 BCL7CQ8WUZ0 217 aaPredicted RBP26.22■■□□□ 1.79
CPNE1-216ENST00000437340 FAM111AQ96PZ2 611 aa26.22■■□□□ 1.79
CPNE1-216ENST00000437340 ZYG11BQ9C0D3 744 aa26.22■■□□□ 1.79
CPNE1-216ENST00000437340 GLOD4Q9HC38 313 aa26.22■■□□□ 1.79
CPNE1-216ENST00000437340 TMEM248Q9NWD8 314 aa26.22■■□□□ 1.79
CPNE1-216ENST00000437340 MPP6Q9NZW5 540 aa26.22■■□□□ 1.79
CPNE1-216ENST00000437340 MARCH2Q9P0N8 246 aa26.22■■□□□ 1.79
CPNE1-216ENST00000437340 MTRRQ9UBK8 725 aa26.22■■□□□ 1.79
CPNE1-216ENST00000437340 PLLPQ9Y342 182 aa26.22■■□□□ 1.79
CPNE1-216ENST00000437340 IGLV3-27P01718 113 aa26.21■■□□□ 1.79
CPNE1-216ENST00000437340 GSTA1P08263 222 aa26.21■■□□□ 1.79
CPNE1-216ENST00000437340 KPNA1P52294 538 aaPredicted RBP26.21■■□□□ 1.79
CPNE1-216ENST00000437340 SF3A3Q12874 501 aaKnown RBP eCLIP26.21■■□□□ 1.793e-8■■■□□ 16.9
CPNE1-216ENST00000437340 USP41Q3LFD5 358 aa26.21■■□□□ 1.79
CPNE1-216ENST00000437340 MROH9Q5TGP6 573 aa26.21■■□□□ 1.79
CPNE1-216ENST00000437340 RASIP1Q5U651 963 aa26.21■■□□□ 1.79
CPNE1-216ENST00000437340 SERBP1Q8NC51 408 aaKnown RBP eCLIP26.21■■□□□ 1.79
CPNE1-216ENST00000437340 FBXO22Q8NEZ5 403 aa26.21■■□□□ 1.79
CPNE1-216ENST00000437340 TTLL2Q9BWV7 592 aa26.21■■□□□ 1.79
CPNE1-216ENST00000437340 MANSC1Q9H8J5 431 aa26.21■■□□□ 1.79
CPNE1-216ENST00000437340 SLCO1B3Q9NPD5 702 aa26.21■■□□□ 1.79
CPNE1-216ENST00000437340 ZFATQ9P243 1243 aa26.21■■□□□ 1.79
CPNE1-216ENST00000437340 BACE2Q9Y5Z0 518 aa26.21■■□□□ 1.79
CPNE1-216ENST00000437340 CDY1Q9Y6F8 540 aa26.21■■□□□ 1.79
CPNE1-216ENST00000437340 PAPOLAP51003 745 aaKnown RBP26.2■■□□□ 1.79
CPNE1-216ENST00000437340 C10orf120Q5SQS8 335 aa26.2■■□□□ 1.79
CPNE1-216ENST00000437340 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.2■■□□□ 1.791e-8■■□□□ 11.7
CPNE1-216ENST00000437340 OTOP3Q7RTS5 596 aa26.2■■□□□ 1.79
CPNE1-216ENST00000437340 CCDC63Q8NA47 563 aa26.2■■□□□ 1.79
CPNE1-216ENST00000437340 USP33Q8TEY7 942 aa26.2■■□□□ 1.79
CPNE1-216ENST00000437340 CDK5RAP1Q96SZ6 601 aaKnown RBP26.2■■□□□ 1.79
CPNE1-216ENST00000437340 HAUS2Q9NVX0 235 aa26.2■■□□□ 1.79
CPNE1-216ENST00000437340 SHROOM3Q8TF72 1996 aa26.2■■□□□ 1.78
CPNE1-216ENST00000437340 TBX18O95935 607 aa26.2■■□□□ 1.78
CPNE1-216ENST00000437340 CSF2RAP15509 400 aa26.2■■□□□ 1.78
CPNE1-216ENST00000437340 RAG1P15918 1043 aa26.2■■□□□ 1.78
CPNE1-216ENST00000437340 CRHR1P34998 444 aa26.2■■□□□ 1.78
CPNE1-216ENST00000437340 ANKRD20A4Q4UJ75 823 aa26.2■■□□□ 1.78
CPNE1-216ENST00000437340 RASSF3Q86WH2 238 aa26.2■■□□□ 1.78
CPNE1-216ENST00000437340 FCRL3Q96P31 734 aaPredicted RBP26.2■■□□□ 1.78
CPNE1-216ENST00000437340 CPNE1Q99829 537 aa26.2■■□□□ 1.78
CPNE1-216ENST00000437340 UBE2OQ9C0C9 1292 aaKnown RBP26.2■■□□□ 1.78
CPNE1-216ENST00000437340 C12orf65Q9H3J6 166 aaKnown RBP26.2■■□□□ 1.78
CPNE1-216ENST00000437340 IPO11Q9UI26 975 aaKnown RBP26.2■■□□□ 1.78
CPNE1-216ENST00000437340 ZCWPW2A0A1B0GU75 182 aa26.19■■□□□ 1.78
CPNE1-216ENST00000437340 GP5P40197 560 aa26.19■■□□□ 1.78
CPNE1-216ENST00000437340 SERPINB4P48594 390 aa26.19■■□□□ 1.78
CPNE1-216ENST00000437340 GEMP55040 296 aa26.19■■□□□ 1.78
CPNE1-216ENST00000437340 IKBKEQ14164 716 aa26.19■■□□□ 1.78
CPNE1-216ENST00000437340 PSMD5Q16401 504 aa26.19■■□□□ 1.78
CPNE1-216ENST00000437340 PRSS55Q6UWB4 352 aaPredicted RBP26.19■■□□□ 1.78
CPNE1-216ENST00000437340 CDHR3Q6ZTQ4 885 aa26.19■■□□□ 1.78
CPNE1-216ENST00000437340 CCDC117Q8IWD4 279 aaPredicted RBP26.19■■□□□ 1.78
CPNE1-216ENST00000437340 RNF168Q8IYW5 571 aaPredicted RBP26.19■■□□□ 1.78
CPNE1-216ENST00000437340 ZNF669Q96BR6 464 aaPredicted RBP26.19■■□□□ 1.78
CPNE1-216ENST00000437340 RASSF4Q9H2L5 321 aa26.19■■□□□ 1.78
CPNE1-216ENST00000437340 NOL6Q9H6R4 1146 aaKnown RBP26.19■■□□□ 1.78
CPNE1-216ENST00000437340 TXNDC16Q9P2K2 825 aa26.19■■□□□ 1.78
CPNE1-216ENST00000437340 SOX13Q9UN79 622 aa26.19■■□□□ 1.78
CPNE1-216ENST00000437340 SLC38A8A6NNN8 435 aa26.18■■□□□ 1.78
CPNE1-216ENST00000437340 KLF11O14901 512 aa26.18■■□□□ 1.78
CPNE1-216ENST00000437340 SCTRP47872 440 aa26.18■■□□□ 1.78
CPNE1-216ENST00000437340 TUFMP49411 452 aaKnown RBP26.18■■□□□ 1.78
CPNE1-216ENST00000437340 CERCAMQ5T4B2 595 aa26.18■■□□□ 1.78
CPNE1-216ENST00000437340 STXBP5Q5T5C0 1151 aa26.18■■□□□ 1.78
CPNE1-216ENST00000437340 GRTP1Q5TC63 336 aa26.18■■□□□ 1.78
CPNE1-216ENST00000437340 TRIM42Q8IWZ5 723 aa26.18■■□□□ 1.78
CPNE1-216ENST00000437340 NDUFAF2Q8N183 169 aa26.18■■□□□ 1.78
CPNE1-216ENST00000437340 TBL1YQ9BQ87 522 aa26.18■■□□□ 1.78
CPNE1-216ENST00000437340 ABCF3Q9NUQ8 709 aa26.18■■□□□ 1.78
CPNE1-216ENST00000437340 SLC12A8A0AV02 714 aa26.18■■□□□ 1.78
CPNE1-216ENST00000437340 WDR91A4D1P6 747 aa26.18■■□□□ 1.78
CPNE1-216ENST00000437340 DRGXA6NNA5 263 aa26.18■■□□□ 1.78
CPNE1-216ENST00000437340 IL1BP01584 269 aa26.18■■□□□ 1.78
CPNE1-216ENST00000437340 FYB2Q5VWT5 728 aa26.18■■□□□ 1.78
CPNE1-216ENST00000437340 CES3Q6UWW8 571 aa26.18■■□□□ 1.78
CPNE1-216ENST00000437340 OTOAQ7RTW8 1153 aa26.18■■□□□ 1.78
CPNE1-216ENST00000437340 MIB1Q86YT6 1006 aa26.18■■□□□ 1.78
CPNE1-216ENST00000437340 MICALL1Q8N3F8 863 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms