RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 DYRK4Q9NR20 520 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 SERGEFQ9UGK8 458 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 ADAMTS1Q9UHI8 967 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 XPO7Q9UIA9 1087 aaKnown RBP7.99□□□□□ -1.13
VPS50-203ENST00000436177 SLCO3A1Q9UIG8 710 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 INTS6Q9UL03 887 aaKnown RBP7.99□□□□□ -1.13
VPS50-203ENST00000436177 RAXQ9Y2V3 346 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 GOLGA4Q13439 2230 aaKnown RBP7.99□□□□□ -1.13
VPS50-203ENST00000436177 ITIH6Q6UXX5 1313 aa7.99□□□□□ -1.13
VPS50-203ENST00000436177 CKAP5Q14008 2032 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 ADAMTS9Q9P2N4 1935 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 IGSF10Q6WRI0 2623 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 A0A1B0GTQ1 180 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 FAM149AA5PLN7 773 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 TLR4O00206 839 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 PES1O00541 588 aaKnown RBP7.98□□□□□ -1.13
VPS50-203ENST00000436177 ENC1O14682 589 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 SLC7A4O43246 635 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 CLDN11O75508 207 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 RFPL3O75679 317 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 LDOC1O95751 146 aaPredicted RBP7.98□□□□□ -1.13
VPS50-203ENST00000436177 FYNP06241 537 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 JUPP14923 745 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 RECQLP46063 649 aaPredicted RBP7.98□□□□□ -1.13
VPS50-203ENST00000436177 MTIF2P46199 727 aaKnown RBP7.98□□□□□ -1.13
VPS50-203ENST00000436177 RPL34P49207 117 aaKnown RBP7.98□□□□□ -1.13
VPS50-203ENST00000436177 NUMBP49757 651 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 MARSP56192 900 aaKnown RBP7.98□□□□□ -1.13
VPS50-203ENST00000436177 KRT83P78385 493 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 SKOR1P84550 965 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 CENPCQ03188 943 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 CYP4F3Q08477 520 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 OVGP1Q12889 678 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 NUMA1Q14980 2115 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 EXOC3L4Q17RC7 722 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 COL28A1Q2UY09 1125 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 SETMARQ53H47 684 aaPredicted RBP7.98□□□□□ -1.13
VPS50-203ENST00000436177 OR6B2Q6IFH4 312 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 TRIM65Q6PJ69 517 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 LRRC31Q6UY01 552 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.98□□□□□ -1.13
VPS50-203ENST00000436177 DBX2Q6ZNG2 339 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 C11orf57Q6ZUT1 292 aaPredicted RBP7.98□□□□□ -1.13
VPS50-203ENST00000436177 TMEM110Q86TL2 294 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 PDZD3Q86UT5 571 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 TMPRSS12Q86WS5 348 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 APCDD1Q8J025 514 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 DEFB106AQ8N104 65 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 AADATQ8N5Z0 425 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 MSANTD4Q8NCY6 345 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 ZNF606Q8WXB4 792 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 MYEOVQ96EZ4 313 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 MYO19Q96H55 970 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 CNDP2Q96KP4 475 aaKnown RBP7.98□□□□□ -1.13
VPS50-203ENST00000436177 LMLNQ96KR4 655 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 C2orf49Q9BVC5 232 aaPredicted RBP7.98□□□□□ -1.13
VPS50-203ENST00000436177 KDM4CQ9H3R0 1056 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 ASNSD1Q9NWL6 643 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 APEX2Q9UBZ4 518 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 RWDD2AQ9UIY3 292 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 VANGL2Q9ULK5 521 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 STAP1Q9ULZ2 295 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 CNTN6Q9UQ52 1028 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 DMTF1Q9Y222 760 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 GPSM3Q9Y4H4 160 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 PCDHGA1Q9Y5H4 931 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 ASPMQ8IZT6 3477 aa7.98□□□□□ -1.13
VPS50-203ENST00000436177 TRABD2BA6NFA1 517 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 E9PAM4 449 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 KPNA3O00505 521 aaPredicted RBP7.97□□□□□ -1.13
VPS50-203ENST00000436177 ALOX15BO15296 676 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 RTN2O75298 545 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 DAB1O75553 588 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 GRAP2O75791 330 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 IGLV3-25P01717 112 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 RHOCP08134 193 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 C1SP09871 688 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 VAV1P15498 845 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 EPHA8P29322 1005 aaPredicted RBP7.97□□□□□ -1.13
VPS50-203ENST00000436177 MAT2AP31153 395 aaKnown RBP7.97□□□□□ -1.13
VPS50-203ENST00000436177 NXPH1P58417 271 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 BPIFB4P59827 614 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 AUHQ13825 339 aaKnown RBP7.97□□□□□ -1.13
VPS50-203ENST00000436177 KCNJ12Q14500 433 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 STAT4Q14765 748 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 TAF5Q15542 800 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 SMAD1Q15797 465 aaKnown RBP7.97□□□□□ -1.13
VPS50-203ENST00000436177 POM121L1PQ3SYA9 428 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 KCNT1Q5JUK3 1230 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 PRAMEF14Q5SWL7 426 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 FBXL22Q6P050 247 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 Q6ZVU0 165 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 IQCHQ86VS3 1027 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 FAM114A1Q8IWE2 563 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 EID2Q8N6I1 236 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 MFSD2AQ8NA29 543 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 ATP11CQ8NB49 1132 aa7.97□□□□□ -1.13
VPS50-203ENST00000436177 C1orf131Q8NDD1 294 aaKnown RBP7.97□□□□□ -1.13
VPS50-203ENST00000436177 HNRNPLLQ8WVV9 542 aaKnown RBP7.97□□□□□ -1.13
VPS50-203ENST00000436177 SHC3Q92529 594 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms