RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 ANAPC1Q9H1A4 1944 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 CCDC66A2RUB6 948 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 C2orf78A6NCI8 922 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 CLSTN1O94985 981 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 CKMP06732 381 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 PFKLP17858 780 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 NAT1P18440 290 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 TNNI1P19237 187 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 BDNFP23560 247 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 DDX6P26196 483 aaKnown RBP eCLIP10.54□□□□□ -0.72
LINC01090-202ENST00000434418 PXNP49023 591 aaPredicted RBP10.54□□□□□ -0.72
LINC01090-202ENST00000434418 CYP24A1Q07973 514 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 CUL4BQ13620 913 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 RUNX3Q13761 415 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 SIM2Q14190 667 aaPredicted RBP10.54□□□□□ -0.72
LINC01090-202ENST00000434418 ZNF460Q14592 562 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 MTF1Q14872 753 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 SURF1Q15526 300 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 TCEA2Q15560 299 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 MDH1BQ5I0G3 518 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 FSTL4Q6MZW2 842 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 CC2D1AQ6P1N0 951 aaPredicted RBP10.54□□□□□ -0.72
LINC01090-202ENST00000434418 CNNM4Q6P4Q7 775 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 FAM171BQ6P995 826 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 UNC13DQ70J99 1090 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 LIMS2Q7Z4I7 341 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 CISD2Q8N5K1 135 aaKnown RBP10.54□□□□□ -0.72
LINC01090-202ENST00000434418 ARL14EPQ8N8R7 260 aaPredicted RBP10.54□□□□□ -0.72
LINC01090-202ENST00000434418 UHMK1Q8TAS1 419 aaKnown RBP10.54□□□□□ -0.72
LINC01090-202ENST00000434418 SH3RF2Q8TEC5 729 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 SNX21Q969T3 373 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 CGRRF1Q99675 332 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 C7orf25Q9BPX7 421 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 MRPL45Q9BRJ2 306 aaKnown RBP10.54□□□□□ -0.72
LINC01090-202ENST00000434418 SMOC1Q9H4F8 434 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 KIF9Q9HAQ2 790 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 FBRSL1Q9HCM7 1045 aaKnown RBP10.54□□□□□ -0.72
LINC01090-202ENST00000434418 SLC39A2Q9NP94 309 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 CATSPERZQ9NTU4 200 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 UXTQ9UBK9 157 aaPredicted RBP10.54□□□□□ -0.72
LINC01090-202ENST00000434418 ASH2LQ9UBL3 628 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 CDH9Q9ULB4 789 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 PCDHA7Q9UN72 937 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 KCTD3Q9Y597 815 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 WNT6Q9Y6F9 365 aa10.54□□□□□ -0.72
LINC01090-202ENST00000434418 CACNA1AO00555 2505 aa10.53□□□□□ -0.72
LINC01090-202ENST00000434418 TRAV19A0A0A6YYK7 116 aa10.53□□□□□ -0.72
LINC01090-202ENST00000434418 EGFP01133 1207 aa10.53□□□□□ -0.72
LINC01090-202ENST00000434418 TGM1P22735 817 aa10.53□□□□□ -0.72
LINC01090-202ENST00000434418 WARSP23381 471 aaKnown RBP10.53□□□□□ -0.72
LINC01090-202ENST00000434418 CASP4P49662 377 aa10.53□□□□□ -0.72
LINC01090-202ENST00000434418 CACNA2D1P54289 1103 aa10.53□□□□□ -0.72
LINC01090-202ENST00000434418 MYL6P60660 151 aa10.53□□□□□ -0.72
LINC01090-202ENST00000434418 TNNC1P63316 161 aa10.53□□□□□ -0.72
LINC01090-202ENST00000434418 PUM1Q14671 1186 aaKnown RBP eCLIP10.53□□□□□ -0.72
LINC01090-202ENST00000434418 KCNB1Q14721 858 aa10.53□□□□□ -0.72
LINC01090-202ENST00000434418 PSMD6Q15008 389 aa10.53□□□□□ -0.72
LINC01090-202ENST00000434418 ZNF77Q15935 545 aa10.53□□□□□ -0.72
LINC01090-202ENST00000434418 TMEM196Q5HYL7 178 aa10.53□□□□□ -0.72
LINC01090-202ENST00000434418 RESP18Q5W5W9 173 aa10.53□□□□□ -0.72
LINC01090-202ENST00000434418 LAIR1Q6GTX8 287 aa10.53□□□□□ -0.72
LINC01090-202ENST00000434418 C4orf50Q6ZRC1 276 aa10.53□□□□□ -0.72
LINC01090-202ENST00000434418 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.53□□□□□ -0.72
LINC01090-202ENST00000434418 XXYLT1Q8NBI6 393 aa10.53□□□□□ -0.72
LINC01090-202ENST00000434418 OR6B3Q8NGW1 331 aa10.53□□□□□ -0.72
LINC01090-202ENST00000434418 SPATA18Q8TC71 538 aa10.53□□□□□ -0.72
LINC01090-202ENST00000434418 PCED1BQ96HM7 432 aa10.53□□□□□ -0.72
LINC01090-202ENST00000434418 FUBP3Q96I24 572 aaKnown RBP eCLIP10.53□□□□□ -0.72
LINC01090-202ENST00000434418 FNBP1Q96RU3 617 aa10.53□□□□□ -0.72
LINC01090-202ENST00000434418 KRTAP9-2Q9BYQ4 174 aa10.53□□□□□ -0.72
LINC01090-202ENST00000434418 SNX25Q9H3E2 840 aa10.53□□□□□ -0.72
LINC01090-202ENST00000434418 DPEP3Q9H4B8 488 aa10.53□□□□□ -0.72
LINC01090-202ENST00000434418 KIAA1586Q9HCI6 787 aa10.53□□□□□ -0.72
LINC01090-202ENST00000434418 DLL3Q9NYJ7 618 aa10.53□□□□□ -0.72
LINC01090-202ENST00000434418 MAGEC2Q9UBF1 373 aaPredicted RBP10.53□□□□□ -0.72
LINC01090-202ENST00000434418 UBE4BO95155 1302 aa10.53□□□□□ -0.72
LINC01090-202ENST00000434418 ATG2BQ96BY7 2078 aa10.53□□□□□ -0.72
LINC01090-202ENST00000434418 TLDC2A0PJX2 215 aa10.52□□□□□ -0.73
LINC01090-202ENST00000434418 CLDN5O00501 218 aa10.52□□□□□ -0.73
LINC01090-202ENST00000434418 KCNK3O14649 394 aa10.52□□□□□ -0.73
LINC01090-202ENST00000434418 AMY2AP04746 511 aa10.52□□□□□ -0.73
LINC01090-202ENST00000434418 KRT15P19012 456 aa10.52□□□□□ -0.73
LINC01090-202ENST00000434418 AMY2BP19961 511 aa10.52□□□□□ -0.73
LINC01090-202ENST00000434418 ANXA13P27216 316 aa10.52□□□□□ -0.73
LINC01090-202ENST00000434418 GNL1P36915 607 aaPredicted RBP10.52□□□□□ -0.73
LINC01090-202ENST00000434418 MAGEA11P43364 429 aa10.52□□□□□ -0.73
LINC01090-202ENST00000434418 GRSF1Q12849 480 aaKnown RBP eCLIP10.52□□□□□ -0.73
LINC01090-202ENST00000434418 ZNF268Q14587 947 aaPredicted RBP10.52□□□□□ -0.73
LINC01090-202ENST00000434418 PDGFRLQ15198 375 aa10.52□□□□□ -0.73
LINC01090-202ENST00000434418 MAPRE1Q15691 268 aaKnown RBP10.52□□□□□ -0.73
LINC01090-202ENST00000434418 WDR72Q3MJ13 1102 aa10.52□□□□□ -0.73
LINC01090-202ENST00000434418 LONP2Q86WA8 852 aa10.52□□□□□ -0.73
LINC01090-202ENST00000434418 FAM129CQ86XR2 697 aa10.52□□□□□ -0.73
LINC01090-202ENST00000434418 KRTAP19-1Q8IUB9 90 aa10.52□□□□□ -0.73
LINC01090-202ENST00000434418 CPA5Q8WXQ8 436 aa10.52□□□□□ -0.73
LINC01090-202ENST00000434418 ZNF518BQ9C0D4 1074 aa10.52□□□□□ -0.73
LINC01090-202ENST00000434418 ECT2Q9H8V3 914 aa10.52□□□□□ -0.73
LINC01090-202ENST00000434418 MAGEF1Q9HAY2 307 aa10.52□□□□□ -0.73
LINC01090-202ENST00000434418 TMEM30AQ9NV96 361 aa10.52□□□□□ -0.73
LINC01090-202ENST00000434418 DUS2Q9NX74 493 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms