RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 RNF34Q969K3 372 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 ISOC1Q96CN7 298 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 MOCOSQ96EN8 888 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 SGF29Q96ES7 293 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 NRBF2Q96F24 287 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 DHRS4Q9BTZ2 278 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 BEGAINQ9BUH8 593 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 CEP41Q9BYV8 373 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 CCDC90BQ9GZT6 254 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 XPNPEP3Q9NQH7 507 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 ASNSD1Q9NWL6 643 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 PRPF19Q9UMS4 504 aaKnown RBP7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 USP18Q9UMW8 372 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 CDYLQ9Y232 598 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 COL2A1P02458 1487 aaPredicted RBP7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 DDX60LQ5H9U9 1706 aaKnown RBP7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 CROCCQ5TZA2 2017 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 UBR3Q6ZT12 1888 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 A0A087WZ62 844 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 DYTNA2CJ06 578 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 TRDMT1O14717 391 aaKnown RBP7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 ZBTB14O43829 449 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 PLIN3O60664 434 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 RNASEH2AO75792 299 aaKnown RBP7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 VAPBO95292 243 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 KRT75O95678 551 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 VTNP04004 478 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 ITGB3P05106 788 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 PDGFRAP16234 1089 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 GSTM4Q03013 218 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 CAPSQ13938 189 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 TWF2Q6IBS0 349 aaKnown RBP7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 Q6ZNX1 250 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 BEST2Q8NFU1 509 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 DLG3Q92796 817 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 PARK7Q99497 189 aaKnown RBP7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 FDXACB1Q9BRP7 624 aaPredicted RBP7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 TASP1Q9H6P5 420 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 TMEM216Q9P0N5 145 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 TMED5Q9Y3A6 229 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 SNX9Q9Y5X1 595 aa7.55□□□□□ -1.2
SYNPO2-203ENST00000434046 H3BRB1 525 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 CLOCKO15516 846 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 LRCH4O75427 683 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 IL18RAPO95256 599 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 OXSR1O95747 527 aaPredicted RBP7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 TSHRP16473 764 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 ZNF12P17014 697 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 MPSTP25325 297 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 IL1R2P27930 398 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 HSDL1Q3SXM5 330 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 ZACNQ401N2 412 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 GLRA4Q5JXX5 417 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 CES4AQ5XG92 561 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 HEATR6Q6AI08 1181 aaKnown RBP7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 PGM2L1Q6PCE3 622 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 ARMCX2Q7L311 632 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 WDR49Q8IV35 697 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 HERC6Q8IVU3 1022 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 BRSK2Q8IWQ3 736 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 ADGRF2Q8IZF7 708 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 OFCC1Q8IZS5 231 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 MPP5Q8N3R9 675 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 TTC16Q8NEE8 873 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 REPS2Q8NFH8 660 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 ZC3H15Q8WU90 426 aaKnown RBP7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 CAPSLQ8WWF8 208 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 IRGQQ8WZA9 623 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 TAMM41Q96BW9 452 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 CISHQ9NSE2 258 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 UTP6Q9NYH9 597 aaKnown RBP7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 PKD2L2Q9NZM6 624 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 IGSF9Q9P2J2 1179 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 COQ4Q9Y3A0 265 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 SQORQ9Y6N5 450 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 FAM149AA5PLN7 773 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 PDHXO00330 501 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 CHADO15335 359 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 FARP2O94887 1054 aaPredicted RBP7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 CLIC3O95833 236 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 CXCL8P10145 99 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 ERVK-10P10266 1014 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 RBP5P82980 135 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 MS4A2Q01362 244 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 PPIL2Q13356 520 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 SPIDRQ14159 915 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 TAF1CQ15572 869 aaPredicted RBP7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 CYP2A13Q16696 494 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 DGKDQ16760 1214 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 ZNF484Q5JVG2 852 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 GJC2Q5T442 439 aaPredicted RBP7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 MBLAC2Q68D91 279 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 SCAIQ8N9R8 606 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 STN1Q9H668 368 aaKnown RBP7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 VPS45Q9NRW7 570 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 DNAJC28Q9NX36 388 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 TJP2Q9UDY2 1190 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 SLC8A2Q9UPR5 921 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 PPME1Q9Y570 386 aa7.54□□□□□ -1.2
SYNPO2-203ENST00000434046 E7ESA3 106 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms