RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 TIMM44O43615 452 aa6.42□□□□□ -1.38
USP54-206ENST00000433394 CEP104O60308 925 aa6.42□□□□□ -1.38
USP54-206ENST00000433394 NFATC1O95644 943 aa6.42□□□□□ -1.38
USP54-206ENST00000433394 IL1AP01583 271 aa6.42□□□□□ -1.38
USP54-206ENST00000433394 GCP02774 474 aa6.42□□□□□ -1.38
USP54-206ENST00000433394 ALOX12P18054 663 aa6.42□□□□□ -1.38
USP54-206ENST00000433394 RPS6KB1P23443 525 aa6.42□□□□□ -1.38
USP54-206ENST00000433394 NFKBIAP25963 317 aa6.42□□□□□ -1.38
USP54-206ENST00000433394 POU1F1P28069 291 aa6.42□□□□□ -1.38
USP54-206ENST00000433394 EPHA8P29322 1005 aaPredicted RBP6.42□□□□□ -1.38
USP54-206ENST00000433394 PLA2G5P39877 138 aa6.42□□□□□ -1.38
USP54-206ENST00000433394 SLC12A2P55011 1212 aa6.42□□□□□ -1.38
USP54-206ENST00000433394 EFNB1P98172 346 aa6.42□□□□□ -1.38
USP54-206ENST00000433394 DCTN2Q13561 401 aaKnown RBP6.42□□□□□ -1.38
USP54-206ENST00000433394 SLC18A3Q16572 532 aa6.42□□□□□ -1.38
USP54-206ENST00000433394 CCNG2Q16589 344 aa6.42□□□□□ -1.38
USP54-206ENST00000433394 PRICKLE4Q2TBC4 344 aa6.42□□□□□ -1.38
USP54-206ENST00000433394 C5orf22Q49AR2 442 aa6.42□□□□□ -1.38
USP54-206ENST00000433394 ARL13AQ5H913 290 aaPredicted RBP6.42□□□□□ -1.38
USP54-206ENST00000433394 FAM171A1Q5VUB5 890 aa6.42□□□□□ -1.38
USP54-206ENST00000433394 IL20RBQ6UXL0 311 aa6.42□□□□□ -1.38
USP54-206ENST00000433394 CYB5R4Q7L1T6 521 aa6.42□□□□□ -1.38
USP54-206ENST00000433394 GSTA5Q7RTV2 222 aa6.42□□□□□ -1.38
USP54-206ENST00000433394 RHPN2Q8IUC4 686 aa6.42□□□□□ -1.38
USP54-206ENST00000433394 ADSSL1Q8N142 457 aa6.42□□□□□ -1.38
USP54-206ENST00000433394 CPXM2Q8N436 756 aa6.42□□□□□ -1.38
USP54-206ENST00000433394 PNLDC1Q8NA58 520 aaKnown RBP6.42□□□□□ -1.38
USP54-206ENST00000433394 NAALADL1Q9UQQ1 740 aa6.42□□□□□ -1.38
USP54-206ENST00000433394 TTLL3Q9Y4R7 772 aa6.42□□□□□ -1.38
USP54-206ENST00000433394 SALL3Q9BXA9 1300 aa6.42□□□□□ -1.38
USP54-206ENST00000433394 C17orf113A0A1B0GUU1 675 aa6.41□□□□□ -1.38
USP54-206ENST00000433394 TCRBV5S1A1TA0A578 114 aa6.41□□□□□ -1.38
USP54-206ENST00000433394 RAMP2O60895 175 aa6.41□□□□□ -1.38
USP54-206ENST00000433394 SEC14L2O76054 403 aa6.41□□□□□ -1.38
USP54-206ENST00000433394 GFPT2O94808 682 aa6.41□□□□□ -1.38
USP54-206ENST00000433394 CYP2D6P10635 497 aa6.41□□□□□ -1.38
USP54-206ENST00000433394 IRF1P10914 325 aa6.41□□□□□ -1.38
USP54-206ENST00000433394 ATF7P17544 494 aaPredicted RBP6.41□□□□□ -1.38
USP54-206ENST00000433394 BSGP35613 385 aa6.41□□□□□ -1.38
USP54-206ENST00000433394 MTNR1AP48039 350 aa6.41□□□□□ -1.38
USP54-206ENST00000433394 RPL7AP62424 266 aaKnown RBP6.41□□□□□ -1.38
USP54-206ENST00000433394 YWHAZP63104 245 aaKnown RBP6.41□□□□□ -1.38
USP54-206ENST00000433394 GPATCH4Q5T3I0 446 aaKnown RBP6.41□□□□□ -1.38
USP54-206ENST00000433394 LRIG3Q6UXM1 1119 aa6.41□□□□□ -1.38
USP54-206ENST00000433394 RNF144BQ7Z419 303 aa6.41□□□□□ -1.38
USP54-206ENST00000433394 AMIGO2Q86SJ2 522 aa6.41□□□□□ -1.38
USP54-206ENST00000433394 IGFN1Q86VF2 1251 aa6.41□□□□□ -1.38
USP54-206ENST00000433394 SCAIQ8N9R8 606 aa6.41□□□□□ -1.38
USP54-206ENST00000433394 OR52N4Q8NGI2 321 aa6.41□□□□□ -1.38
USP54-206ENST00000433394 C2CD4CQ8TF44 421 aa6.41□□□□□ -1.38
USP54-206ENST00000433394 ZFPM2Q8WW38 1151 aa6.41□□□□□ -1.38
USP54-206ENST00000433394 LARP4BQ92615 738 aaKnown RBP6.41□□□□□ -1.38
USP54-206ENST00000433394 NEUROD6Q96NK8 337 aa6.41□□□□□ -1.38
USP54-206ENST00000433394 ASB2Q96Q27 587 aa6.41□□□□□ -1.38
USP54-206ENST00000433394 FCRL5Q96RD9 977 aa6.41□□□□□ -1.38
USP54-206ENST00000433394 PEMTQ9UBM1 199 aa6.41□□□□□ -1.38
USP54-206ENST00000433394 UPB1Q9UBR1 384 aa6.41□□□□□ -1.38
USP54-206ENST00000433394 FBXO40Q9UH90 709 aa6.41□□□□□ -1.38
USP54-206ENST00000433394 MYRFQ9Y2G1 1151 aa6.41□□□□□ -1.38
USP54-206ENST00000433394 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.4□□□□□ -1.38
USP54-206ENST00000433394 ARHGAP10A1A4S6 786 aa6.4□□□□□ -1.38
USP54-206ENST00000433394 INPPL1O15357 1258 aa6.4□□□□□ -1.38
USP54-206ENST00000433394 HNRNPCL1O60812 293 aaKnown RBP6.4□□□□□ -1.38
USP54-206ENST00000433394 FZD7O75084 574 aa6.4□□□□□ -1.38
USP54-206ENST00000433394 TSPAN9O75954 239 aa6.4□□□□□ -1.38
USP54-206ENST00000433394 URODP06132 367 aa6.4□□□□□ -1.38
USP54-206ENST00000433394 TFEBP19484 476 aa6.4□□□□□ -1.38
USP54-206ENST00000433394 TYK2P29597 1187 aa6.4□□□□□ -1.38
USP54-206ENST00000433394 FMO4P31512 558 aa6.4□□□□□ -1.38
USP54-206ENST00000433394 RPS3AP61247 264 aaKnown RBP6.4□□□□□ -1.38
USP54-206ENST00000433394 NUCB1Q02818 461 aa6.4□□□□□ -1.38
USP54-206ENST00000433394 TOMM20Q15388 145 aa6.4□□□□□ -1.38
USP54-206ENST00000433394 TMEM81Q6P7N7 255 aa6.4□□□□□ -1.38
USP54-206ENST00000433394 RBM44Q6ZP01 1051 aaKnown RBP6.4□□□□□ -1.38
USP54-206ENST00000433394 MDGA2Q7Z553 956 aa6.4□□□□□ -1.38
USP54-206ENST00000433394 TADA2BQ86TJ2 420 aa6.4□□□□□ -1.38
USP54-206ENST00000433394 RFX6Q8HWS3 928 aa6.4□□□□□ -1.38
USP54-206ENST00000433394 PAQR4Q8N4S7 273 aaPredicted RBP6.4□□□□□ -1.38
USP54-206ENST00000433394 FAM110DQ8TAY7 271 aaPredicted RBP6.4□□□□□ -1.38
USP54-206ENST00000433394 POMGNT1Q8WZA1 660 aa6.4□□□□□ -1.38
USP54-206ENST00000433394 SARAFQ96BY9 339 aa6.4□□□□□ -1.38
USP54-206ENST00000433394 P2RY11Q96G91 374 aa6.4□□□□□ -1.38
USP54-206ENST00000433394 TEFMQ96QE5 360 aaKnown RBP6.4□□□□□ -1.38
USP54-206ENST00000433394 SEMA4BQ9NPR2 832 aaPredicted RBP6.4□□□□□ -1.38
USP54-206ENST00000433394 IL17RBQ9NRM6 502 aa6.4□□□□□ -1.38
USP54-206ENST00000433394 TMEM248Q9NWD8 314 aa6.4□□□□□ -1.38
USP54-206ENST00000433394 BABAM1Q9NWV8 329 aa6.4□□□□□ -1.38
USP54-206ENST00000433394 ASB6Q9NWX5 421 aa6.4□□□□□ -1.38
USP54-206ENST00000433394 EHD2Q9NZN4 543 aa6.4□□□□□ -1.38
USP54-206ENST00000433394 LIMA1Q9UHB6 759 aaKnown RBP6.4□□□□□ -1.38
USP54-206ENST00000433394 VPS28Q9UK41 221 aa6.4□□□□□ -1.38
USP54-206ENST00000433394 GPR34Q9UPC5 381 aa6.4□□□□□ -1.38
USP54-206ENST00000433394 LYVE1Q9Y5Y7 322 aa6.4□□□□□ -1.38
USP54-206ENST00000433394 KRTAP9-7A8MTY7 169 aa6.39□□□□□ -1.39
USP54-206ENST00000433394 EIF3CLB5ME19 914 aaKnown RBP6.39□□□□□ -1.39
USP54-206ENST00000433394 KCNJ18B7U540 433 aa6.39□□□□□ -1.39
USP54-206ENST00000433394 LCKP06239 509 aa6.39□□□□□ -1.39
USP54-206ENST00000433394 FCGR2AP12318 317 aa6.39□□□□□ -1.39
USP54-206ENST00000433394 BLKP51451 505 aa6.39□□□□□ -1.39
USP54-206ENST00000433394 GSTA3Q16772 222 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms