RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 AQP12BA6NM10 295 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 PRMT5O14744 637 aaPredicted RBP3.83□□□□□ -1.8
SHPRH-205ENST00000433355 CBFA2T3O75081 653 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 NDUFS2O75306 463 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 ALDH1A2O94788 518 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 F2P00734 622 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 SLC9A1P19634 815 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 ENDOUP21128 410 aaKnown RBP3.83□□□□□ -1.8
SHPRH-205ENST00000433355 CD151P48509 253 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 SLC18A2Q05940 514 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 MBTD1Q05BQ5 628 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 TTBK2Q6IQ55 1244 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 ANKS3Q6ZW76 656 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 MARK2Q7KZI7 788 aaKnown RBP3.83□□□□□ -1.8
SHPRH-205ENST00000433355 CNTN4Q8IWV2 1026 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 AQP12AQ8IXF9 295 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 BANPQ8N9N5 519 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 CYP2W1Q8TAV3 490 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 STAG3L4Q8TBR4 150 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 ERP27Q96DN0 273 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 COLEC11Q9BWP8 271 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 TMEM39BQ9GZU3 492 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 NGRNQ9NPE2 291 aaKnown RBP3.83□□□□□ -1.8
SHPRH-205ENST00000433355 REXO2Q9Y3B8 237 aaKnown RBP3.83□□□□□ -1.8
SHPRH-205ENST00000433355 HSPE1-MOB4S4R3N1 261 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 TRPM6Q9BX84 2022 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 hCG_1642624A0A1W2PR95 340 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 TRIM49D1C9J1S8 452 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 C22orf31O95567 290 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 CYBBP04839 570 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 GLRA2P23416 452 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 ELF1P32519 619 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 RFC1P35251 1148 aaPredicted RBP3.83□□□□□ -1.8
SHPRH-205ENST00000433355 PRKG2Q13237 762 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 PDE12Q6L8Q7 609 aaKnown RBP3.83□□□□□ -1.8
SHPRH-205ENST00000433355 CYP4F22Q6NT55 531 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 SLC30A9Q6PML9 568 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 UMODL1-AS1Q8N2C9 162 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 SLC43A2Q8N370 569 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 UBR7Q8N806 425 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 VPS33AQ96AX1 596 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 PTCD3Q96EY7 689 aaKnown RBP3.83□□□□□ -1.8
SHPRH-205ENST00000433355 TUBA1CQ9BQE3 449 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 DNAJC18Q9H819 358 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 ITM2CQ9NQX7 267 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 SBF1O95248 1867 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 PLXNB2O15031 1838 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 PTPRDP23468 1912 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 DDTLA6NHG4 134 aaPredicted RBP3.83□□□□□ -1.8
SHPRH-205ENST00000433355 PEX10O60683 326 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 NMT1P30419 496 aaKnown RBP3.83□□□□□ -1.8
SHPRH-205ENST00000433355 GPD2P43304 727 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 MRPS6P82932 125 aaKnown RBP3.83□□□□□ -1.8
SHPRH-205ENST00000433355 NOGQ13253 232 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 FBXO43Q4G163 708 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 C1orf146Q5VVC0 180 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 DHDDSQ86SQ9 333 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 FAM149B1Q96BN6 582 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 TRIM31Q9BZY9 425 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 SETD4Q9NVD3 440 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 ZNF446Q9NWS9 450 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 FOXN1O15353 648 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 RHOQP17081 205 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 ITIH1P19827 911 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 CFL1P23528 166 aaKnown RBP3.83□□□□□ -1.8
SHPRH-205ENST00000433355 GRB14Q14449 540 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 MTF1Q14872 753 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 ZC3H12BQ5HYM0 836 aaKnown RBP3.83□□□□□ -1.8
SHPRH-205ENST00000433355 TTC23Q5W5X9 447 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 CLNKQ7Z7G1 428 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.83□□□□□ -1.8
SHPRH-205ENST00000433355 IL31RAQ8NI17 732 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 NAF1Q96HR8 494 aaKnown RBP3.83□□□□□ -1.8
SHPRH-205ENST00000433355 DHRS4Q9BTZ2 278 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 SLC25A51Q9H1U9 297 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 SPAG4Q9NPE6 437 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 ARHGEF38Q9NXL2 777 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 NDUFAF1Q9Y375 327 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 PLCE1Q9P212 2302 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 ARID1AO14497 2285 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 UGDHO60701 494 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 RAD17O75943 681 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 HOXC13P31276 330 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 ATXN3P54252 364 aaPredicted RBP3.83□□□□□ -1.8
SHPRH-205ENST00000433355 CXorf56Q9H5V9 222 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 ATAD3AQ9NVI7 634 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 RGL1Q9NZL6 768 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 XPO7Q9UIA9 1087 aaKnown RBP3.83□□□□□ -1.8
SHPRH-205ENST00000433355 TRPV2Q9Y5S1 764 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 ANK1P16157 1881 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 LRRK2Q5S007 2527 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 SOCS5O75159 536 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 CBSLP0DN79 551 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 VEGFAP15692 232 aaPredicted RBP3.83□□□□□ -1.8
SHPRH-205ENST00000433355 CDC25CP30307 473 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 CBSP35520 551 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 PGM1P36871 562 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 ATP1A2P50993 1020 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 LIMK2P53671 638 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 GRIK4Q16099 956 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms