RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 MIB1Q86YT6 1006 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 FAM126BQ8IXS8 530 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 REM2Q8IYK8 340 aaPredicted RBP8.51□□□□□ -1.05
HDAC9-212ENST00000432645 DCP1BQ8IZD4 617 aaKnown RBP8.51□□□□□ -1.05
HDAC9-212ENST00000432645 GBP7Q8N8V2 638 aaPredicted RBP8.51□□□□□ -1.05
HDAC9-212ENST00000432645 LRRC8CQ8TDW0 803 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 CCT6BQ92526 530 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 LRRC39Q96DD0 335 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 MPP4Q96JB8 637 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 SEPT5Q99719 369 aaPredicted RBP8.51□□□□□ -1.05
HDAC9-212ENST00000432645 PPP1R12CQ9BZL4 782 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 IGSF5Q9NSI5 407 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 GGA2Q9UJY4 613 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 ITGB1BP2Q9UKP3 347 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 PCDHA11Q9Y5I1 949 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 GMEB1Q9Y692 573 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 CCT8L1PA6NM43 557 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 LIN7AO14910 233 aaPredicted RBP8.5□□□□□ -1.05
HDAC9-212ENST00000432645 TOP3BO95985 862 aaKnown RBP8.5□□□□□ -1.05
HDAC9-212ENST00000432645 IGLV3-25P01717 112 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 HMBSP08397 361 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 TPH1P17752 444 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 NFKB1P19838 968 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 PRKCHP24723 683 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 SERPINB6P35237 376 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 SLC11A1P49279 550 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 MGAT5BQ3V5L5 792 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 TTC39BQ5VTQ0 682 aaPredicted RBP8.5□□□□□ -1.05
HDAC9-212ENST00000432645 LRRC8BQ6P9F7 803 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 RSPO2Q6UXX9 243 aaPredicted RBP8.5□□□□□ -1.05
HDAC9-212ENST00000432645 CDHR3Q6ZTQ4 885 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 OTOP3Q7RTS5 596 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 TAS1R1Q7RTX1 841 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 C14orf80Q86SX3 495 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 PLPP6Q8IY26 295 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 NUP93Q8N1F7 819 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 ARNTL2Q8WYA1 636 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 TTC17Q96AE7 1141 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 OXNAD1Q96HP4 312 aaPredicted RBP8.5□□□□□ -1.05
HDAC9-212ENST00000432645 CRISPLD1Q9H336 500 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 GMIPQ9P107 970 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 KLHL42Q9P2K6 505 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 BAIAP2L1Q9UHR4 511 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 PHTF1Q9UMS5 762 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 NUP205Q92621 2012 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 ARHGAP42A6NI28 874 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 TBKBP1A7MCY6 615 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 TRDMT1O14717 391 aaKnown RBP8.5□□□□□ -1.05
HDAC9-212ENST00000432645 ATP9BO43861 1147 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 KRT37O76014 449 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 ZWINTO95229 277 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 SNRPAP09012 282 aaKnown RBP8.5□□□□□ -1.05
HDAC9-212ENST00000432645 ERVK-10P10266 1014 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 MX2P20592 715 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 TUBP50607 506 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 GALNT2Q10471 571 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 EFEMP1Q12805 493 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 PDK4Q16654 411 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 PLEKHG4Q58EX7 1191 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 RTP2Q5QGT7 225 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 AGAP9Q5VTM2 703 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 TRPM8Q7Z2W7 1104 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 KDELC2Q7Z4H8 507 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 SPATA22Q8NHS9 363 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 CASD1Q96PB1 797 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 CFHR5Q9BXR6 569 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 CCDC68Q9H2F9 335 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 SMOC2Q9H3U7 446 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 ARHGEF38Q9NXL2 777 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 L3MBTL1Q9Y468 752 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 PCDHB5Q9Y5E4 795 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 HMX2A2RU54 273 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 EIF4E1BA6NMX2 242 aaKnown RBP8.5□□□□□ -1.05
HDAC9-212ENST00000432645 NCAM2O15394 837 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 SUN1O94901 812 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 CDK7P50613 346 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 CDK16Q00536 496 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 BFSP2Q13515 415 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 EIF4EBP2Q13542 120 aaPredicted RBP8.5□□□□□ -1.05
HDAC9-212ENST00000432645 ITIH4Q14624 930 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 SNCBQ16143 134 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 NFE2Q16621 373 aaPredicted RBP8.5□□□□□ -1.05
HDAC9-212ENST00000432645 TEX44Q53QW1 395 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 CERCAMQ5T4B2 595 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 PRSS55Q6UWB4 352 aaPredicted RBP8.5□□□□□ -1.05
HDAC9-212ENST00000432645 NEK10Q6ZWH5 1172 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 NANOGNBQ7Z5D8 188 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 TFAP2DQ7Z6R9 452 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 TBC1D1Q86TI0 1168 aaPredicted RBP8.5□□□□□ -1.05
HDAC9-212ENST00000432645 SLC15A3Q8IY34 581 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 ZNF75CPQ92670 426 aaPredicted RBP8.5□□□□□ -1.05
HDAC9-212ENST00000432645 PTPRN2Q92932 1015 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 HDAC11Q96DB2 347 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 ATXN7L3BQ96GX2 97 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 MARCH5Q9NX47 278 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 IGSF9Q9P2J2 1179 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 VANGL2Q9ULK5 521 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 PSAT1Q9Y617 370 aa8.5□□□□□ -1.05
HDAC9-212ENST00000432645 TET1Q8NFU7 2136 aa8.49□□□□□ -1.05
HDAC9-212ENST00000432645 E2F8A0AVK6 867 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms