RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 CDC6Q99741 560 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 C1QTNF2Q9BXJ5 285 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 NEUROG2Q9H2A3 272 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 EBF2Q9HAK2 575 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SLC12A6Q9UHW9 1150 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 BTBD3Q9Y2F9 522 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 CEP83Q9Y592 693 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 PLXNA2O75051 1894 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 FAM47DPA6NHR8 397 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 LRRC72A6NJI9 287 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 H0Y8X5 98 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 DAB1O75553 588 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 GRAP2O75791 330 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 RNASEH2AO75792 299 aaKnown RBP9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 APC2O95996 2303 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ATXN1LP0C7T5 689 aaKnown RBP9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 VAV1P15498 845 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 PDGFRAP16234 1089 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 GOT1P17174 413 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 C5AR1P21730 350 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 DRD3P35462 400 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 GRK6P43250 576 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 PSMD8P48556 350 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 CCT8P50990 548 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 IRAK1P51617 712 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 CCR5P51681 352 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 OXCT1P55809 520 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 CENPCQ03188 943 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 PTK2Q05397 1052 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SULT2A1Q06520 285 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 MTA1Q13330 715 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 AUHQ13825 339 aaKnown RBP9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SUZ12Q15022 739 aaKnown RBP9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 C5orf22Q49AR2 442 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 PTPN20Q4JDL3 420 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 C11orf57Q6ZUT1 292 aaPredicted RBP9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SLC47A2Q86VL8 602 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 PROSER1Q86XN7 944 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 FAM71AQ8IYT1 594 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 STK40Q8N2I9 435 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ZNF397Q8NF99 534 aaPredicted RBP9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 OR52K2Q8NGK3 314 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 EPS8L1Q8TE68 723 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 RHBDD1Q8TEB9 315 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 GANCQ8TET4 914 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SLC6A18Q96N87 628 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 NOX5Q96PH1 765 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SPAG5Q96R06 1193 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ACE2Q9BYF1 805 aaPredicted RBP9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 RALYQ9UKM9 306 aaKnown RBP9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TPX2Q9ULW0 747 aaKnown RBP9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 OR51B4Q9Y5P0 310 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 HS3ST4Q9Y661 456 aa9.69□□□□□ -0.86
CDC42-IT1-201ENST00000431803 CACNA1GO43497 2377 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 PTPRBP23467 1997 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 PLXNB3Q9ULL4 1909 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SMG1Q96Q15 3661 aaKnown RBP9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 IGSF10Q6WRI0 2623 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SYNJ2BP-COX16A0A087WUM0 186 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 A0A1B0GTQ1 180 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TAF4O00268 1085 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 FOXN3O00409 490 aaPredicted RBP9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 KCNK3O14649 394 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 LATO43561 262 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ATP9BO43861 1147 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 DFNA5O60443 496 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 PAGE1O75459 146 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 IL1BP01584 269 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 WNT1P04628 370 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 PNMA6AP0CW24 399 aaPredicted RBP9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 CDH5P33151 784 aaPredicted RBP9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 NOS2P35228 1153 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 NNMTP40261 264 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 MTIF2P46199 727 aaKnown RBP9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 METAP1P53582 386 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SLC6A3Q01959 620 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SCAPQ12770 1279 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 MAN2A1Q16706 1144 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 MIIPQ5JXC2 388 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SND1Q7KZF4 910 aaKnown RBP eCLIP9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ADAT2Q7Z6V5 191 aaKnown RBP9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ZDHHC17Q8IUH5 632 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 CREBRFQ8IUR6 639 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 NT5C3BQ969T7 300 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 RPRD1AQ96P16 312 aaPredicted RBP9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 NPY6RQ99463 290 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 OMDQ99983 421 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ARHGAP9Q9BRR9 750 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 FEM1AQ9BSK4 669 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 PIGVQ9NUD9 493 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 COX16Q9P0S2 106 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 DNAJC12Q9UKB3 198 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 VANGL2Q9ULK5 521 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TBC1D30Q9Y2I9 924 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ATRXP46100 2492 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ACACAQ13085 2346 aa9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TP53BP1Q12888 1972 aaPredicted RBP9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 COL5A1P20908 1838 aaPredicted RBP9.68□□□□□ -0.86
CDC42-IT1-201ENST00000431803 A0A1W2PR77 199 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 I6L893 689 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms