RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 ME3Q16798 604 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 LRRC36Q1X8D7 754 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 PCID2Q5JVF3 399 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 ANO7Q6IWH7 933 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 UNC13DQ70J99 1090 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 HTR3DQ70Z44 454 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 TRAPPC11Q7Z392 1133 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 RABEPKQ7Z6M1 372 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 CATSPER3Q86XQ3 398 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 DNAAF5Q86Y56 855 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 CDAN1Q8IWY9 1227 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 PLD5Q8N7P1 536 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 NCOA7Q8NI08 942 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 LPGAT1Q92604 370 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 CPNE2Q96FN4 548 aaPredicted RBP5.46□□□□□ -1.54
PTPN4-203ENST00000430976 FAM213AQ9BRX8 229 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 TOR3AQ9H497 397 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 EBF2Q9HAK2 575 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 KCNH7Q9NS40 1196 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 KLHL11Q9NVR0 708 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 MAT2BQ9NZL9 334 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 ZNF223Q9UK11 482 aaPredicted RBP5.46□□□□□ -1.54
PTPN4-203ENST00000430976 SETD5Q9C0A6 1442 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 CEP164Q9UPV0 1460 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 A0A088AWK7 358 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 LINC00587B1AMM8 73 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 CCDC188H7C350 402 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 GATCO43716 136 aaKnown RBP5.45□□□□□ -1.54
PTPN4-203ENST00000430976 LZTS3O60299 673 aaPredicted RBP5.45□□□□□ -1.54
PTPN4-203ENST00000430976 GMDSO60547 372 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 DHFRP00374 187 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 PFKMP08237 780 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 DARSP14868 501 aaKnown RBP5.45□□□□□ -1.54
PTPN4-203ENST00000430976 RPS2P15880 293 aaKnown RBP5.45□□□□□ -1.54
PTPN4-203ENST00000430976 ZNF10P21506 573 aaPredicted RBP5.45□□□□□ -1.54
PTPN4-203ENST00000430976 GSTM2P28161 218 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 CASP1P29466 404 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 METAP1P53582 386 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 PSMC6P62333 389 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 REEP5Q00765 189 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 SLC12A1Q13621 1099 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 BCL2A1Q16548 175 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 CARTPTQ16568 116 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 AAK1Q2M2I8 961 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 THEM4Q5T1C6 240 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 FAM160B1Q5W0V3 765 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 TIGD7Q6NT04 549 aaPredicted RBP5.45□□□□□ -1.54
PTPN4-203ENST00000430976 MOXD1Q6UVY6 613 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 PRR23BQ6ZRT6 265 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 MSANTD1Q6ZTZ1 278 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 CYP4Z1Q86W10 505 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 LINC00518Q8N0U6 118 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 PRR18Q8N4B5 295 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 SLC2A14Q8TDB8 520 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 SELENOMQ8WWX9 145 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 MAFIPQ8WZ33 124 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 KAT2AQ92830 837 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 RMND5BQ96G75 393 aaPredicted RBP5.45□□□□□ -1.54
PTPN4-203ENST00000430976 SGCZQ96LD1 299 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 TM9SF3Q9HD45 589 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 CD300AQ9UGN4 299 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 PGAP2Q9UHJ9 254 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 ENPP5Q9UJA9 477 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 TRPV2Q9Y5S1 764 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 ZNF608Q9ULD9 1512 aaPredicted RBP5.45□□□□□ -1.54
PTPN4-203ENST00000430976 C2orf92A0A1B0GVN3 265 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 OR2AG2A6NM03 316 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 CCDC22O60826 627 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 NSD2O96028 1365 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 TPOP07202 933 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 ZNF18P17022 549 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 EIF2DP41214 584 aaKnown RBP5.45□□□□□ -1.54
PTPN4-203ENST00000430976 ITGA8P53708 1063 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 ERVK-25P63136 954 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 CACNB1Q02641 598 aaPredicted RBP5.45□□□□□ -1.54
PTPN4-203ENST00000430976 MGAT5Q09328 741 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 ELP6Q0PNE2 266 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 POU4F2Q12837 409 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 TDRD12Q587J7 1177 aaKnown RBP5.45□□□□□ -1.54
PTPN4-203ENST00000430976 RSBN1Q5VWQ0 802 aaPredicted RBP5.45□□□□□ -1.54
PTPN4-203ENST00000430976 ULK3Q6PHR2 472 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 APOA5Q6Q788 366 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 PET117Q6UWS5 81 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 SNX20Q7Z614 316 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 SGMS1Q86VZ5 419 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 ZSWIM9Q86XI8 627 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 CROCCP3Q8IVE0 287 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 OFCC1Q8IZS5 231 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 CRACR2BQ8N4Y2 399 aaPredicted RBP5.45□□□□□ -1.54
PTPN4-203ENST00000430976 NKAPQ8N5F7 415 aaKnown RBP5.45□□□□□ -1.54
PTPN4-203ENST00000430976 FANCBQ8NB91 859 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 FNDC8Q8TC99 324 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 PROX1Q92786 737 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 MUL1Q969V5 352 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.45□□□□□ -1.54
PTPN4-203ENST00000430976 ERVK-6Q9BXR3 956 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 OR51B6Q9H340 312 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 CHODLQ9H9P2 273 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 S100A14Q9HCY8 104 aa5.45□□□□□ -1.54
PTPN4-203ENST00000430976 PDE7BQ9NP56 450 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms