RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 SPAARA0A1B0GVQ0 90 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 FAM47DPA6NHR8 397 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 KCNK3O14649 394 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 ZNF821O75541 412 aaPredicted RBP12.84□□□□□ -0.35
SMPD4-204ENST00000430682 RNASEH2AO75792 299 aaKnown RBP12.84□□□□□ -0.35
SMPD4-204ENST00000430682 ZMPSTE24O75844 475 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 FSBPO95073 299 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 CTSLP07711 333 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 RHOCP08134 193 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 SPINK2P20155 84 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 ADRA1BP35368 520 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 PTPN9P43378 593 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 VASPP50552 380 aaPredicted RBP12.84□□□□□ -0.35
SMPD4-204ENST00000430682 GSCP56915 257 aaPredicted RBP12.84□□□□□ -0.35
SMPD4-204ENST00000430682 RPL7AP62424 266 aaKnown RBP12.84□□□□□ -0.35
SMPD4-204ENST00000430682 OGDHQ02218 1023 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 SULT2A1Q06520 285 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 ZNF252P-AS1Q0IIN9 211 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 POM121L1PQ3SYA9 428 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 PPP1R15BQ5SWA1 713 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 NCEH1Q6PIU2 408 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 LINGO4Q6UY18 593 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 TRIM72Q6ZMU5 477 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 SND1Q7KZF4 910 aaKnown RBP eCLIP12.84□□□□□ -0.35
SMPD4-204ENST00000430682 HDDC3Q8N4P3 179 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 MSANTD4Q8NCY6 345 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 ANKRD20A12PQ8NF67 263 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 GANCQ8TET4 914 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 FAM131CQ96AQ9 280 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 HAPLN3Q96S86 360 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 MUC3BQ9H195 1237 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 PCED1AQ9H1Q7 454 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 SGK2Q9HBY8 427 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 TM9SF3Q9HD45 589 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 SUSD2Q9UGT4 822 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 LRRK1Q38SD2 2015 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 ANKRD36A6QL64 1941 aa12.84□□□□□ -0.35
SMPD4-204ENST00000430682 GOLGA4Q13439 2230 aaKnown RBP12.83□□□□□ -0.36
SMPD4-204ENST00000430682 A0A1B0GTH6 734 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 SYCE3A1L190 88 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 UPK3BL1B0FP48 263 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 UPK3BL2E5RIL1 263 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 SH3BP5O60239 455 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 OPHN1O60890 802 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 RTN2O75298 545 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 CD160O95971 181 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 IL1BP01584 269 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 WNT1P04628 370 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 SYPP08247 313 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 KRT3P12035 628 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 CEACAM1P13688 526 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 GNSP15586 552 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 RRM1P23921 792 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 NSFP46459 744 aaKnown RBP12.83□□□□□ -0.36
SMPD4-204ENST00000430682 ZNF165P49910 485 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 PPP2CBP62714 309 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 PPP2CAP67775 309 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 TTC31Q49AM3 519 aaPredicted RBP12.83□□□□□ -0.36
SMPD4-204ENST00000430682 ACCSLQ4AC99 568 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 KIAA0895LQ68EN5 471 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.83□□□□□ -0.36
SMPD4-204ENST00000430682 RABEPKQ7Z6M1 372 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 PYROXD2Q8N2H3 581 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 CHST14Q8NCH0 376 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 FAM172AQ8WUF8 416 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 VOPP1Q96AW1 172 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 TTYH3Q9C0H2 523 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 SLC25A13Q9UJS0 675 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 SCML1Q9UN30 329 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 HS3ST2Q9Y278 367 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 FNDC3AQ9Y2H6 1198 aaKnown RBP12.83□□□□□ -0.36
SMPD4-204ENST00000430682 SNX11Q9Y5W9 270 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 CHD6Q8TD26 2715 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 NBEAQ8NFP9 2946 aa12.83□□□□□ -0.36
SMPD4-204ENST00000430682 LRRC53A6NM62 1247 aa12.82□□□□□ -0.36
SMPD4-204ENST00000430682 SIGLEC16A6NMB1 481 aa12.82□□□□□ -0.36
SMPD4-204ENST00000430682 MCF2LO15068 1137 aa12.82□□□□□ -0.36
SMPD4-204ENST00000430682 CCP110O43303 1012 aa12.82□□□□□ -0.36
SMPD4-204ENST00000430682 BNIP3LO60238 219 aa12.82□□□□□ -0.36
SMPD4-204ENST00000430682 RNASEH1O60930 286 aaKnown RBP12.82□□□□□ -0.36
SMPD4-204ENST00000430682 FERP16591 822 aa12.82□□□□□ -0.36
SMPD4-204ENST00000430682 GOT1P17174 413 aa12.82□□□□□ -0.36
SMPD4-204ENST00000430682 C5AR1P21730 350 aa12.82□□□□□ -0.36
SMPD4-204ENST00000430682 CD27P26842 260 aa12.82□□□□□ -0.36
SMPD4-204ENST00000430682 OR1E1P30953 314 aa12.82□□□□□ -0.36
SMPD4-204ENST00000430682 SDC4P31431 198 aa12.82□□□□□ -0.36
SMPD4-204ENST00000430682 ACVRL1P37023 503 aa12.82□□□□□ -0.36
SMPD4-204ENST00000430682 ATXN3P54252 364 aaPredicted RBP12.82□□□□□ -0.36
SMPD4-204ENST00000430682 ADPRHP54922 357 aa12.82□□□□□ -0.36
SMPD4-204ENST00000430682 OXCT1P55809 520 aa12.82□□□□□ -0.36
SMPD4-204ENST00000430682 TAS2R38P59533 333 aa12.82□□□□□ -0.36
SMPD4-204ENST00000430682 ARF5P84085 180 aa12.82□□□□□ -0.36
SMPD4-204ENST00000430682 CNTN1Q12860 1018 aa12.82□□□□□ -0.36
SMPD4-204ENST00000430682 MTA1Q13330 715 aa12.82□□□□□ -0.36
SMPD4-204ENST00000430682 ELAVL3Q14576 367 aaKnown RBP12.82□□□□□ -0.36
SMPD4-204ENST00000430682 NR1I3Q14994 352 aa12.82□□□□□ -0.36
SMPD4-204ENST00000430682 KIF19Q2TAC6 998 aa12.82□□□□□ -0.36
SMPD4-204ENST00000430682 HLA-BQ31612 363 aa12.82□□□□□ -0.36
SMPD4-204ENST00000430682 ACAD10Q6JQN1 1059 aa12.82□□□□□ -0.36
SMPD4-204ENST00000430682 STRADAQ7RTN6 431 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms