RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 QTRT1Q9BXR0 403 aaKnown RBP3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 PRSS22Q9GZN4 317 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 LMAN2LQ9H0V9 348 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 NOD2Q9HC29 1040 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 ARL8BQ9NVJ2 186 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 ADD3Q9UEY8 706 aaKnown RBP3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 RAB21Q9UL25 225 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 ZBTB1Q9Y2K1 713 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 PCDHB2Q9Y5E7 798 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 CCDC187A0A096LP49 1063 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 CCDC196A0A1B0GTZ2 297 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 SMIM35A0A1B0GVV1 85 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 P4HA2O15460 535 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 PLOD3O60568 738 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 TMEM63AO94886 807 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 PGM3O95394 542 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 ADRB2P07550 413 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 EPHA8P29322 1005 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 CCKBRP32239 447 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 THBS4P35443 961 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 HADHAP40939 763 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 RNASELQ05823 741 aaKnown RBP3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 FHL1Q13642 323 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 DCTN1Q14203 1278 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 KPNB1Q14974 876 aaKnown RBP3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 DAZAP2Q15038 168 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 GPR68Q15743 365 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 BAK1Q16611 211 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 AWAT1Q58HT5 328 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 CCDC129Q6ZRS4 1044 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 RINLQ6ZS11 566 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 CNGA4Q8IV77 575 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 UEVLDQ8IX04 471 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 CNTROBQ8N137 903 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 NGEFQ8N5V2 710 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 PRSS3P2Q8NHM4 247 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 PIGOQ8TEQ8 1089 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 CLEC4CQ8WTT0 213 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 NPIPB3Q92617 1050 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 AKAP1Q92667 903 aaKnown RBP eCLIP3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 MAP4K1Q92918 833 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 P2RY11Q96G91 374 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 PRR11Q96HE9 360 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 MPHOSPH8Q99549 860 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 FUZQ9BT04 418 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 AP1M1Q9BXS5 423 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 TRIM2Q9C040 744 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 ALDH8A1Q9H2A2 487 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 MROH8Q9H579 483 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 CDCP1Q9H5V8 836 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 STN1Q9H668 368 aaKnown RBP3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 CCDC134Q9H6E4 229 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 KCNK9Q9NPC2 374 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 SEMA4BQ9NPR2 832 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 PDGFCQ9NRA1 345 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 HAUS2Q9NVX0 235 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 NSMCE4AQ9NXX6 385 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 NKIRAS2Q9NYR9 191 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 VPS28Q9UK41 221 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 TRPC5Q9UL62 973 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 VPS4AQ9UN37 437 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 PCDHGB4Q9UN71 923 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 PCDHA10Q9Y5I2 948 aa3.23□□□□□ -1.89
HMGB1P9-201ENST00000429856 SPATA31A5Q5VU36 1347 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 SPATA31A7Q8IWB4 1347 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 RSF1Q96T23 1441 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 A0A1W2PRQ8 180 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 NPIPB15A6NHN6 443 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 FAM90A7PA6NKC0 464 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 AGAP14A8MT82 685 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 FAM90A22PA8MWA6 464 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 EFCAB8A8MWE9 144 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 FAM90A12PA8MX19 464 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 FAM90A23PA8MXZ1 464 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 E5RJQ4 531 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 IFNL4K9M1U5 179 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 LDLRAD4O15165 306 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 INPPL1O15357 1258 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 DHX16O60231 1041 aaKnown RBP3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 CLEC3BP05452 202 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 CD63P08962 238 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 PORP16435 677 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 ATP5F1P24539 256 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 NDUFS1P28331 727 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 TKTP29401 623 aaKnown RBP3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 SLC8A1P32418 973 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 ICAM3P32942 547 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 PSMC2P35998 433 aaKnown RBP3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 PGM1P36871 562 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 MLH1P40692 756 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 ARHGAP25P42331 645 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 VPS41P49754 854 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 CDK7P50613 346 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 SLC12A2P55011 1212 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 BECN1Q14457 450 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 TRIP6Q15654 476 aaKnown RBP3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 SUPT20HL1Q3ZLR7 823 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 ANKRD40Q6AI12 368 aa3.22□□□□□ -1.89
HMGB1P9-201ENST00000429856 UBE2Q1Q7Z7E8 422 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms