RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 ARHGAP20Q9P2F6 1191 aa15.3■□□□□ 0.04
MSH5-208ENST00000429846 PPM1HQ9ULR3 514 aa15.3■□□□□ 0.04
MSH5-208ENST00000429846 HS3ST2Q9Y278 367 aa15.3■□□□□ 0.04
MSH5-208ENST00000429846 FARP1Q9Y4F1 1045 aaPredicted RBP15.3■□□□□ 0.04
MSH5-208ENST00000429846 OR51B4Q9Y5P0 310 aa15.3■□□□□ 0.04
MSH5-208ENST00000429846 TRABD2BA6NFA1 517 aa15.29■□□□□ 0.04
MSH5-208ENST00000429846 WNT9AO14904 365 aa15.29■□□□□ 0.04
MSH5-208ENST00000429846 RTN2O75298 545 aa15.29■□□□□ 0.04
MSH5-208ENST00000429846 LDOC1O95751 146 aaPredicted RBP15.29■□□□□ 0.04
MSH5-208ENST00000429846 F9P00740 461 aa15.29■□□□□ 0.04
MSH5-208ENST00000429846 SCNN1AP37088 669 aa15.29■□□□□ 0.04
MSH5-208ENST00000429846 KRT83P78385 493 aa15.29■□□□□ 0.04
MSH5-208ENST00000429846 APBA1Q02410 837 aa15.29■□□□□ 0.04
MSH5-208ENST00000429846 DLG2Q15700 870 aa15.29■□□□□ 0.04
MSH5-208ENST00000429846 MAN2A1Q16706 1144 aa15.29■□□□□ 0.04
MSH5-208ENST00000429846 CCDC157Q569K6 752 aa15.29■□□□□ 0.04
MSH5-208ENST00000429846 AGBL4Q5VU57 503 aa15.29■□□□□ 0.04
MSH5-208ENST00000429846 SFMBT2Q5VUG0 894 aa15.29■□□□□ 0.04
MSH5-208ENST00000429846 Q6ZVU0 165 aa15.29■□□□□ 0.04
MSH5-208ENST00000429846 SETD3Q86TU7 594 aaPredicted RBP15.29■□□□□ 0.04
MSH5-208ENST00000429846 IRF2BP1Q8IU81 584 aa15.29■□□□□ 0.04
MSH5-208ENST00000429846 OR52K2Q8NGK3 314 aa15.29■□□□□ 0.04
MSH5-208ENST00000429846 NXPE2Q96DL1 559 aa15.29■□□□□ 0.04
MSH5-208ENST00000429846 PGAP3Q96FM1 320 aaPredicted RBP15.29■□□□□ 0.04
MSH5-208ENST00000429846 NPY6RQ99463 290 aa15.29■□□□□ 0.04
MSH5-208ENST00000429846 MUC3BQ9H195 1237 aa15.29■□□□□ 0.04
MSH5-208ENST00000429846 SIX2Q9NPC8 291 aa15.29■□□□□ 0.04
MSH5-208ENST00000429846 ARHGEF38Q9NXL2 777 aa15.29■□□□□ 0.04
MSH5-208ENST00000429846 DNAJC12Q9UKB3 198 aa15.29■□□□□ 0.04
MSH5-208ENST00000429846 SARDHQ9UL12 918 aa15.29■□□□□ 0.04
MSH5-208ENST00000429846 RAXQ9Y2V3 346 aa15.29■□□□□ 0.04
MSH5-208ENST00000429846 URB1O60287 2271 aaKnown RBP15.29■□□□□ 0.04
MSH5-208ENST00000429846 DOCK4Q8N1I0 1966 aa15.29■□□□□ 0.04
MSH5-208ENST00000429846 BAHCC1Q9P281 2608 aa15.28■□□□□ 0.04
MSH5-208ENST00000429846 FAM149AA5PLN7 773 aa15.28■□□□□ 0.04
MSH5-208ENST00000429846 PRAMEF26H0Y7S4 382 aa15.28■□□□□ 0.04
MSH5-208ENST00000429846 RNGTTO60942 597 aaKnown RBP15.28■□□□□ 0.04
MSH5-208ENST00000429846 ZNF18P17022 549 aa15.28■□□□□ 0.04
MSH5-208ENST00000429846 CDH5P33151 784 aaPredicted RBP15.28■□□□□ 0.04
MSH5-208ENST00000429846 CLCN1P35523 988 aa15.28■□□□□ 0.04
MSH5-208ENST00000429846 CXCR3P49682 368 aa15.28■□□□□ 0.04
MSH5-208ENST00000429846 ACADVLP49748 655 aa15.28■□□□□ 0.04
MSH5-208ENST00000429846 NUMBP49757 651 aa15.28■□□□□ 0.04
MSH5-208ENST00000429846 IRAK1P51617 712 aa15.28■□□□□ 0.04
MSH5-208ENST00000429846 CLCN6P51797 869 aa15.28■□□□□ 0.04
MSH5-208ENST00000429846 METAP1P53582 386 aa15.28■□□□□ 0.04
MSH5-208ENST00000429846 CYP4F3Q08477 520 aa15.28■□□□□ 0.04
MSH5-208ENST00000429846 CNTN1Q12860 1018 aa15.28■□□□□ 0.04
MSH5-208ENST00000429846 ILKQ13418 452 aa15.28■□□□□ 0.04
MSH5-208ENST00000429846 STAT4Q14765 748 aa15.28■□□□□ 0.04
MSH5-208ENST00000429846 CAMK4Q16566 473 aa15.28■□□□□ 0.04
MSH5-208ENST00000429846 TPD52L1Q16890 204 aaPredicted RBP15.28■□□□□ 0.04
MSH5-208ENST00000429846 PRAMEF14Q5SWL7 426 aa15.28■□□□□ 0.04
MSH5-208ENST00000429846 OTUD1Q5VV17 481 aaPredicted RBP15.28■□□□□ 0.04
MSH5-208ENST00000429846 NEK5Q6P3R8 708 aa15.28■□□□□ 0.04
MSH5-208ENST00000429846 PDZD3Q86UT5 571 aa15.28■□□□□ 0.04
MSH5-208ENST00000429846 SLC47A2Q86VL8 602 aa15.28■□□□□ 0.04
MSH5-208ENST00000429846 FAM71AQ8IYT1 594 aa15.28■□□□□ 0.04
MSH5-208ENST00000429846 DCAF4L2Q8NA75 395 aa15.28■□□□□ 0.04
MSH5-208ENST00000429846 TMEM35BQ8NCS4 154 aa15.28■□□□□ 0.04
MSH5-208ENST00000429846 NT5C3BQ969T7 300 aa15.28■□□□□ 0.04
MSH5-208ENST00000429846 TKTL2Q9H0I9 626 aa15.28■□□□□ 0.04
MSH5-208ENST00000429846 SIK2Q9H0K1 926 aa15.28■□□□□ 0.04
MSH5-208ENST00000429846 WDCPQ9H6R7 721 aa15.28■□□□□ 0.04
MSH5-208ENST00000429846 PIGVQ9NUD9 493 aa15.28■□□□□ 0.04
MSH5-208ENST00000429846 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.28■□□□□ 0.04
MSH5-208ENST00000429846 ARID1BQ8NFD5 2236 aaPredicted RBP15.28■□□□□ 0.04
MSH5-208ENST00000429846 DOCK9Q9BZ29 2069 aa15.28■□□□□ 0.04
MSH5-208ENST00000429846 FOXN3O00409 490 aaPredicted RBP15.27■□□□□ 0.04
MSH5-208ENST00000429846 RHOCP08134 193 aa15.27■□□□□ 0.04
MSH5-208ENST00000429846 SRCP12931 536 aa15.27■□□□□ 0.04
MSH5-208ENST00000429846 HOXB3P14651 431 aaPredicted RBP15.27■□□□□ 0.04
MSH5-208ENST00000429846 MAT2AP31153 395 aaKnown RBP15.27■□□□□ 0.04
MSH5-208ENST00000429846 GGCXP38435 758 aa15.27■□□□□ 0.04
MSH5-208ENST00000429846 SULT1E1P49888 294 aa15.27■□□□□ 0.04
MSH5-208ENST00000429846 COL28A1Q2UY09 1125 aa15.27■□□□□ 0.04
MSH5-208ENST00000429846 C6orf118Q5T5N4 469 aa15.27■□□□□ 0.04
MSH5-208ENST00000429846 C19orf48Q6RUI8 117 aa15.27■□□□□ 0.04
MSH5-208ENST00000429846 LRRC31Q6UY01 552 aa15.27■□□□□ 0.04
MSH5-208ENST00000429846 EID2Q8N6I1 236 aa15.27■□□□□ 0.04
MSH5-208ENST00000429846 TSC1Q92574 1164 aa15.27■□□□□ 0.04
MSH5-208ENST00000429846 C1orf74Q96LT6 269 aa15.27■□□□□ 0.04
MSH5-208ENST00000429846 PDCL3Q9H2J4 239 aa15.27■□□□□ 0.04
MSH5-208ENST00000429846 NDST4Q9H3R1 872 aa15.27■□□□□ 0.04
MSH5-208ENST00000429846 AJAP1Q9UKB5 411 aaPredicted RBP15.27■□□□□ 0.04
MSH5-208ENST00000429846 A0A087WV48 116 aa15.26■□□□□ 0.03
MSH5-208ENST00000429846 PLK4O00444 970 aa15.26■□□□□ 0.03
MSH5-208ENST00000429846 ADCY5O95622 1261 aa15.26■□□□□ 0.03
MSH5-208ENST00000429846 PRNPP04156 253 aa15.26■□□□□ 0.03
MSH5-208ENST00000429846 GABRB2P47870 512 aa15.26■□□□□ 0.03
MSH5-208ENST00000429846 DEUP1Q05D60 604 aa15.26■□□□□ 0.03
MSH5-208ENST00000429846 DNAJC3Q13217 504 aa15.26■□□□□ 0.03
MSH5-208ENST00000429846 COL9A2Q14055 689 aaPredicted RBP15.26■□□□□ 0.03
MSH5-208ENST00000429846 SLC25A52Q3SY17 297 aa15.26■□□□□ 0.03
MSH5-208ENST00000429846 ALFQ53S48 1182 aa15.26■□□□□ 0.03
MSH5-208ENST00000429846 PIP5KL1Q5T9C9 394 aa15.26■□□□□ 0.03
MSH5-208ENST00000429846 KANSL1Q7Z3B3 1105 aa15.26■□□□□ 0.03
MSH5-208ENST00000429846 C14orf80Q86SX3 495 aa15.26■□□□□ 0.03
MSH5-208ENST00000429846 SPATS2Q86XZ4 545 aaKnown RBP15.26■□□□□ 0.03
MSH5-208ENST00000429846 MARCH9Q86YJ5 346 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms