RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 ANP32DO95626 131 aa13.95□□□□□ -0.18
THBS3-202ENST00000428962 TOP3BO95985 862 aaKnown RBP13.95□□□□□ -0.18
THBS3-202ENST00000428962 GSRP00390 522 aa13.95□□□□□ -0.18
THBS3-202ENST00000428962 SERPINA6P08185 405 aa13.95□□□□□ -0.18
THBS3-202ENST00000428962 KITP10721 976 aa13.95□□□□□ -0.18
THBS3-202ENST00000428962 PRKCZQ05513 592 aa13.95□□□□□ -0.18
THBS3-202ENST00000428962 CERCAMQ5T4B2 595 aa13.95□□□□□ -0.18
THBS3-202ENST00000428962 CES4AQ5XG92 561 aa13.95□□□□□ -0.18
THBS3-202ENST00000428962 CCSAPQ6IQ19 270 aaPredicted RBP13.95□□□□□ -0.18
THBS3-202ENST00000428962 ZCCHC23Q6ZST2 131 aa13.95□□□□□ -0.18
THBS3-202ENST00000428962 LRRC49Q8IUZ0 686 aa13.95□□□□□ -0.18
THBS3-202ENST00000428962 CCDC117Q8IWD4 279 aaPredicted RBP13.95□□□□□ -0.18
THBS3-202ENST00000428962 DCP1BQ8IZD4 617 aaKnown RBP13.95□□□□□ -0.18
THBS3-202ENST00000428962 CFAP61Q8NHU2 1237 aa13.95□□□□□ -0.18
THBS3-202ENST00000428962 SCAMP5Q8TAC9 235 aa13.95□□□□□ -0.18
THBS3-202ENST00000428962 URGCPQ8TCY9 931 aa13.95□□□□□ -0.18
THBS3-202ENST00000428962 RILPQ96NA2 401 aa13.95□□□□□ -0.18
THBS3-202ENST00000428962 ANKRD27Q96NW4 1050 aa13.95□□□□□ -0.18
THBS3-202ENST00000428962 SERPINB11Q96P15 392 aa13.95□□□□□ -0.18
THBS3-202ENST00000428962 FCRL5Q96RD9 977 aa13.95□□□□□ -0.18
THBS3-202ENST00000428962 MIPEPQ99797 713 aa13.95□□□□□ -0.18
THBS3-202ENST00000428962 TBL1YQ9BQ87 522 aa13.95□□□□□ -0.18
THBS3-202ENST00000428962 IL1RAPL1Q9NZN1 696 aa13.95□□□□□ -0.18
THBS3-202ENST00000428962 FNIP2Q9P278 1114 aa13.95□□□□□ -0.18
THBS3-202ENST00000428962 MARCOQ9UEW3 520 aaPredicted RBP13.95□□□□□ -0.18
THBS3-202ENST00000428962 TNFRSF10BO14763 440 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 PAGE1O75459 146 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 EOMESO95936 686 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 APOA4P06727 396 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 CPA3P15088 417 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 KCNA4P22459 653 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 GEMP55040 296 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 NRG1Q02297 640 aaPredicted RBP13.94□□□□□ -0.18
THBS3-202ENST00000428962 ITGA7Q13683 1181 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 TRIM71Q2Q1W2 868 aaKnown RBP13.94□□□□□ -0.18
THBS3-202ENST00000428962 MANEALQ5VSG8 457 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 FSTL4Q6MZW2 842 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 LCA5Q86VQ0 697 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 ARHGAP18Q8N392 663 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 GIMAP7Q8NHV1 300 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 MFSD3Q96ES6 412 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 KIFC1Q9BW19 673 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 CADM1Q9BY67 442 aaKnown RBP13.94□□□□□ -0.18
THBS3-202ENST00000428962 ANKRD6Q9Y2G4 727 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 DNAJC16Q9Y2G8 782 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 A0A096LPK6 155 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 CAPN14A8MX76 684 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 TMEM189-UBE2V1I3L0A0 370 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 MATN3O15232 486 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 GSC2O15499 205 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 PEX11AO75192 247 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 NEBLO76041 1014 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 SLC2A3P11169 496 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 RALBP11234 206 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 CCND3P30281 292 aaPredicted RBP13.94□□□□□ -0.18
THBS3-202ENST00000428962 TRIM32Q13049 653 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 UGP2Q16851 508 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 ANO4Q32M45 955 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 HSP90AA5PQ58FG0 334 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 PCID2Q5JVF3 399 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 ARMC3Q5W041 872 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 TTC7BQ86TV6 843 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 C10orf107Q8IVU9 208 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 ARHGAP12Q8IWW6 846 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 TEX9Q8N6V9 391 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 ENDOVQ8N8Q3 282 aaKnown RBP13.94□□□□□ -0.18
THBS3-202ENST00000428962 ZSCAN18Q8TBC5 510 aaPredicted RBP13.94□□□□□ -0.18
THBS3-202ENST00000428962 PTCD2Q8WV60 388 aaKnown RBP13.94□□□□□ -0.18
THBS3-202ENST00000428962 PRR11Q96HE9 360 aaPredicted RBP13.94□□□□□ -0.18
THBS3-202ENST00000428962 FUBP3Q96I24 572 aaKnown RBP eCLIP13.94□□□□□ -0.18
THBS3-202ENST00000428962 RSRC1Q96IZ7 334 aaKnown RBP13.94□□□□□ -0.18
THBS3-202ENST00000428962 FCRL2Q96LA5 508 aaPredicted RBP13.94□□□□□ -0.18
THBS3-202ENST00000428962 TSNARE1Q96NA8 513 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 NUDCD1Q96RS6 583 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 IL12RB2Q99665 862 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 APOL2Q9BQE5 337 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 C20orf27Q9GZN8 174 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 GLOD4Q9HC38 313 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 RGS18Q9NS28 235 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 TMEM216Q9P0N5 145 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 TAGLN3Q9UI15 199 aa13.94□□□□□ -0.18
THBS3-202ENST00000428962 SHROOM3Q8TF72 1996 aa13.93□□□□□ -0.18
THBS3-202ENST00000428962 SPECC1L-ADORA2AF8WAN1 911 aa13.93□□□□□ -0.18
THBS3-202ENST00000428962 ITGB1P05556 798 aa13.93□□□□□ -0.18
THBS3-202ENST00000428962 MYL4P12829 197 aa13.93□□□□□ -0.18
THBS3-202ENST00000428962 PRKAR2AP13861 404 aaKnown RBP13.93□□□□□ -0.18
THBS3-202ENST00000428962 CCNG1P51959 295 aa13.93□□□□□ -0.18
THBS3-202ENST00000428962 ABCE1P61221 599 aaKnown RBP13.93□□□□□ -0.18
THBS3-202ENST00000428962 SMAD1Q15797 465 aaKnown RBP13.93□□□□□ -0.18
THBS3-202ENST00000428962 NFE2Q16621 373 aaPredicted RBP13.93□□□□□ -0.18
THBS3-202ENST00000428962 DNAL1Q4LDG9 190 aa13.93□□□□□ -0.18
THBS3-202ENST00000428962 SLC39A12Q504Y0 691 aa13.93□□□□□ -0.18
THBS3-202ENST00000428962 PPM1JQ5JR12 505 aa13.93□□□□□ -0.18
THBS3-202ENST00000428962 RINLQ6ZS11 566 aa13.93□□□□□ -0.18
THBS3-202ENST00000428962 CMC1Q7Z7K0 106 aa13.93□□□□□ -0.18
THBS3-202ENST00000428962 RNF180Q86T96 592 aa13.93□□□□□ -0.18
THBS3-202ENST00000428962 SCN4BQ8IWT1 228 aa13.93□□□□□ -0.18
THBS3-202ENST00000428962 CNTD1Q8N815 330 aa13.93□□□□□ -0.18
THBS3-202ENST00000428962 RTL3Q8N8U3 475 aaKnown RBP13.93□□□□□ -0.18
THBS3-202ENST00000428962 PPHLN1Q8NEY8 458 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms