RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 C18orf8Q96DM3 657 aa17.54■□□□□ 0.4
TRIM39-209ENST00000428728 ARHGEF38Q9NXL2 777 aa17.54■□□□□ 0.4
TRIM39-209ENST00000428728 TAB2Q9NYJ8 693 aa17.54■□□□□ 0.4
TRIM39-209ENST00000428728 FTSJ1Q9UET6 329 aa17.54■□□□□ 0.4
TRIM39-209ENST00000428728 OR51B4Q9Y5P0 310 aa17.54■□□□□ 0.4
TRIM39-209ENST00000428728 C1QTNF3-AMACRE9PGA6 284 aa17.53■□□□□ 0.4
TRIM39-209ENST00000428728 DFNA5O60443 496 aa17.53■□□□□ 0.4
TRIM39-209ENST00000428728 SNAP91O60641 907 aa17.53■□□□□ 0.4
TRIM39-209ENST00000428728 UCHL3P15374 230 aa17.53■□□□□ 0.4
TRIM39-209ENST00000428728 FLT3P36888 993 aa17.53■□□□□ 0.4
TRIM39-209ENST00000428728 CXCR3P49682 368 aa17.53■□□□□ 0.4
TRIM39-209ENST00000428728 CNTN1Q12860 1018 aa17.53■□□□□ 0.4
TRIM39-209ENST00000428728 FAM46CQ5VWP2 391 aa17.53■□□□□ 0.4
TRIM39-209ENST00000428728 NOP9Q86U38 636 aaKnown RBP17.53■□□□□ 0.4
TRIM39-209ENST00000428728 MARCH9Q86YJ5 346 aa17.53■□□□□ 0.4
TRIM39-209ENST00000428728 PSMB7Q99436 277 aa17.53■□□□□ 0.4
TRIM39-209ENST00000428728 ELF4Q99607 663 aaPredicted RBP17.53■□□□□ 0.4
TRIM39-209ENST00000428728 GDF3Q9NR23 364 aa17.53■□□□□ 0.4
TRIM39-209ENST00000428728 MPP6Q9NZW5 540 aa17.53■□□□□ 0.4
TRIM39-209ENST00000428728 VPS51Q9UID3 782 aa17.53■□□□□ 0.4
TRIM39-209ENST00000428728 TBC1D30Q9Y2I9 924 aa17.53■□□□□ 0.4
TRIM39-209ENST00000428728 FAM208BQ5VWN6 2430 aa17.53■□□□□ 0.4
TRIM39-209ENST00000428728 TRPM6Q9BX84 2022 aa17.53■□□□□ 0.4
TRIM39-209ENST00000428728 A0A1W2PR77 199 aa17.52■□□□□ 0.4
TRIM39-209ENST00000428728 C10orf142B7Z368 130 aa17.52■□□□□ 0.4
TRIM39-209ENST00000428728 F8VZ95 297 aa17.52■□□□□ 0.4
TRIM39-209ENST00000428728 TNFSF14O43557 240 aa17.52■□□□□ 0.4
TRIM39-209ENST00000428728 PLRG1O43660 514 aaKnown RBP17.52■□□□□ 0.4
TRIM39-209ENST00000428728 MMEP08473 750 aa17.52■□□□□ 0.4
TRIM39-209ENST00000428728 SRCP12931 536 aa17.52■□□□□ 0.4
TRIM39-209ENST00000428728 GABRB2P47870 512 aa17.52■□□□□ 0.4
TRIM39-209ENST00000428728 VASPP50552 380 aaPredicted RBP17.52■□□□□ 0.4
TRIM39-209ENST00000428728 KRT83P78385 493 aa17.52■□□□□ 0.4
TRIM39-209ENST00000428728 SLC25A52Q3SY17 297 aa17.52■□□□□ 0.4
TRIM39-209ENST00000428728 C5orf22Q49AR2 442 aa17.52■□□□□ 0.4
TRIM39-209ENST00000428728 TCP11X2Q5H9J9 407 aa17.52■□□□□ 0.4
TRIM39-209ENST00000428728 AGBL4Q5VU57 503 aa17.52■□□□□ 0.4
TRIM39-209ENST00000428728 NAA35Q5VZE5 725 aa17.52■□□□□ 0.4
TRIM39-209ENST00000428728 NAPEPLDQ6IQ20 393 aa17.52■□□□□ 0.4
TRIM39-209ENST00000428728 PROSER1Q86XN7 944 aa17.52■□□□□ 0.4
TRIM39-209ENST00000428728 ZNF683Q8IZ20 524 aa17.52■□□□□ 0.4
TRIM39-209ENST00000428728 EPS8L1Q8TE68 723 aa17.52■□□□□ 0.4
TRIM39-209ENST00000428728 CPA5Q8WXQ8 436 aa17.52■□□□□ 0.4
TRIM39-209ENST00000428728 NAA15Q9BXJ9 866 aaKnown RBP17.52■□□□□ 0.4
TRIM39-209ENST00000428728 PAXBP1Q9Y5B6 917 aa17.52■□□□□ 0.4
TRIM39-209ENST00000428728 K7ERQ8 282 aa17.51■□□□□ 0.39
TRIM39-209ENST00000428728 CBX4O00257 560 aa17.51■□□□□ 0.39
TRIM39-209ENST00000428728 TAF4O00268 1085 aa17.51■□□□□ 0.39
TRIM39-209ENST00000428728 ALOX15BO15296 676 aa17.51■□□□□ 0.39
TRIM39-209ENST00000428728 SLC7A4O43246 635 aa17.51■□□□□ 0.39
TRIM39-209ENST00000428728 LATO43561 262 aa17.51■□□□□ 0.39
TRIM39-209ENST00000428728 DKK1O94907 266 aa17.51■□□□□ 0.39
TRIM39-209ENST00000428728 LSM8O95777 96 aaKnown RBP17.51■□□□□ 0.39
TRIM39-209ENST00000428728 MT-CO1P00395 513 aa17.51■□□□□ 0.39
TRIM39-209ENST00000428728 ITGAVP06756 1048 aa17.51■□□□□ 0.39
TRIM39-209ENST00000428728 RRM1P23921 792 aa17.51■□□□□ 0.39
TRIM39-209ENST00000428728 SCNN1AP37088 669 aa17.51■□□□□ 0.39
TRIM39-209ENST00000428728 NOMO3P69849 1222 aa17.51■□□□□ 0.39
TRIM39-209ENST00000428728 SHBQ15464 509 aa17.51■□□□□ 0.39
TRIM39-209ENST00000428728 SLC45A4Q5BKX6 768 aa17.51■□□□□ 0.39
TRIM39-209ENST00000428728 TRNP1Q6NT89 227 aa17.51■□□□□ 0.39
TRIM39-209ENST00000428728 LRRC31Q6UY01 552 aa17.51■□□□□ 0.39
TRIM39-209ENST00000428728 LINGO4Q6UY18 593 aa17.51■□□□□ 0.39
TRIM39-209ENST00000428728 TMPRSS7Q7RTY8 843 aa17.51■□□□□ 0.39
TRIM39-209ENST00000428728 PRPF39Q86UA1 669 aaKnown RBP17.51■□□□□ 0.39
TRIM39-209ENST00000428728 ATP11CQ8NB49 1132 aa17.51■□□□□ 0.39
TRIM39-209ENST00000428728 MSANTD4Q8NCY6 345 aa17.51■□□□□ 0.39
TRIM39-209ENST00000428728 MDM1Q8TC05 714 aa17.51■□□□□ 0.39
TRIM39-209ENST00000428728 SLC20A1Q8WUM9 679 aa17.51■□□□□ 0.39
TRIM39-209ENST00000428728 NT5C3BQ969T7 300 aa17.51■□□□□ 0.39
TRIM39-209ENST00000428728 FAM131CQ96AQ9 280 aa17.51■□□□□ 0.39
TRIM39-209ENST00000428728 PGAP3Q96FM1 320 aaPredicted RBP17.51■□□□□ 0.39
TRIM39-209ENST00000428728 CFAP57Q96MR6 1250 aa17.51■□□□□ 0.39
TRIM39-209ENST00000428728 C2orf49Q9BVC5 232 aaPredicted RBP17.51■□□□□ 0.39
TRIM39-209ENST00000428728 CCDC86Q9H6F5 360 aaKnown RBP17.51■□□□□ 0.39
TRIM39-209ENST00000428728 METTL5Q9NRN9 209 aaKnown RBP17.51■□□□□ 0.39
TRIM39-209ENST00000428728 PPM1HQ9ULR3 514 aa17.51■□□□□ 0.39
TRIM39-209ENST00000428728 TPX2Q9ULW0 747 aaKnown RBP17.51■□□□□ 0.39
TRIM39-209ENST00000428728 HS3ST2Q9Y278 367 aa17.51■□□□□ 0.39
TRIM39-209ENST00000428728 CHD6Q8TD26 2715 aa17.51■□□□□ 0.39
TRIM39-209ENST00000428728 PKD1L2Q7Z442 2459 aa17.5■□□□□ 0.39
TRIM39-209ENST00000428728 ARID1BQ8NFD5 2236 aaPredicted RBP17.5■□□□□ 0.39
TRIM39-209ENST00000428728 A0A0D9SEW6 157 aa17.5■□□□□ 0.39
TRIM39-209ENST00000428728 FAM149AA5PLN7 773 aa17.5■□□□□ 0.39
TRIM39-209ENST00000428728 E9PAM4 449 aa17.5■□□□□ 0.39
TRIM39-209ENST00000428728 KPNA3O00505 521 aaPredicted RBP17.5■□□□□ 0.39
TRIM39-209ENST00000428728 MCF2LO15068 1137 aa17.5■□□□□ 0.39
TRIM39-209ENST00000428728 GFPT2O94808 682 aa17.5■□□□□ 0.39
TRIM39-209ENST00000428728 F9P00740 461 aa17.5■□□□□ 0.39
TRIM39-209ENST00000428728 CAPNS1P04632 268 aa17.5■□□□□ 0.39
TRIM39-209ENST00000428728 CTSLP07711 333 aa17.5■□□□□ 0.39
TRIM39-209ENST00000428728 EEF1GP26641 437 aaKnown RBP17.5■□□□□ 0.39
TRIM39-209ENST00000428728 EPHA8P29322 1005 aaPredicted RBP17.5■□□□□ 0.39
TRIM39-209ENST00000428728 KLK7P49862 253 aa17.5■□□□□ 0.39
TRIM39-209ENST00000428728 NXPH1P58417 271 aa17.5■□□□□ 0.39
TRIM39-209ENST00000428728 DHRS13Q6UX07 377 aa17.5■□□□□ 0.39
TRIM39-209ENST00000428728 FAM131BQ86XD5 332 aa17.5■□□□□ 0.39
TRIM39-209ENST00000428728 DCAF4L2Q8NA75 395 aa17.5■□□□□ 0.39
TRIM39-209ENST00000428728 OR7D4Q8NG98 312 aa17.5■□□□□ 0.39
TRIM39-209ENST00000428728 GRIN3AQ8TCU5 1115 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms