RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 IMPG2Q9BZV3 1241 aa8.29□□□□□ -1.08
CSTF1-203ENST00000428552 LRRC4Q9HBW1 653 aa8.29□□□□□ -1.08
CSTF1-203ENST00000428552 TMEM8AQ9HCN3 771 aa8.29□□□□□ -1.08
CSTF1-203ENST00000428552 PREBQ9HCU5 417 aa8.29□□□□□ -1.08
CSTF1-203ENST00000428552 CNGB3Q9NQW8 809 aa8.29□□□□□ -1.08
CSTF1-203ENST00000428552 TDRD6O60522 2096 aaKnown RBP8.29□□□□□ -1.08
CSTF1-203ENST00000428552 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.28□□□□□ -1.08
CSTF1-203ENST00000428552 A0A1W2PQU0 124 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 PIK3R2O00459 728 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 MCF2LO15068 1137 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 ATP9BO43861 1147 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 CUTAO60888 179 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 TNFSF15O95150 251 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 LTFP02788 710 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 ITGB2P05107 769 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 ITGA2BP08514 1039 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 GP1BBP13224 206 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 LCP1P13796 627 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 RGS7P49802 495 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 PLK1P53350 603 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 ENPEPQ07075 957 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 ZNF177Q13360 481 aaPredicted RBP8.28□□□□□ -1.08
CSTF1-203ENST00000428552 EIF4EBP2Q13542 120 aaPredicted RBP8.28□□□□□ -1.08
CSTF1-203ENST00000428552 FGL2Q14314 439 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 STK38Q15208 465 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 NFIL3Q16649 462 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 KMT5BQ4FZB7 885 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 TMEM259Q4ZIN3 620 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 SEL1L3Q68CR1 1132 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 OR6B2Q6IFH4 312 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 CXorf57Q6NSI4 855 aaKnown RBP8.28□□□□□ -1.08
CSTF1-203ENST00000428552 ZCCHC8Q6NZY4 707 aaKnown RBP8.28□□□□□ -1.08
CSTF1-203ENST00000428552 XKR5Q6UX68 686 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 RBM44Q6ZP01 1051 aaKnown RBP8.28□□□□□ -1.08
CSTF1-203ENST00000428552 Q6ZVU0 165 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 EFL1Q7Z2Z2 1120 aaKnown RBP8.28□□□□□ -1.08
CSTF1-203ENST00000428552 CIR1Q86X95 450 aaPredicted RBP8.28□□□□□ -1.08
CSTF1-203ENST00000428552 LGI2Q8N0V4 545 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 SIX6OS1Q8N1H7 587 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 WDR36Q8NI36 951 aaKnown RBP8.28□□□□□ -1.08
CSTF1-203ENST00000428552 SLC35F5Q8WV83 523 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 HTR3CQ8WXA8 447 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 IRGQQ8WZA9 623 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 TFAP2BQ92481 460 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 GRAMD1AQ96CP6 724 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 PRMT1Q99873 361 aaKnown RBP8.28□□□□□ -1.08
CSTF1-203ENST00000428552 SEMA3CQ99985 751 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 ABCG4Q9H172 646 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 MMRN2Q9H8L6 949 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 DACH1Q9UI36 760 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 ACSL6Q9UKU0 697 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 PNMA8BQ9ULN7 279 aaPredicted RBP8.28□□□□□ -1.08
CSTF1-203ENST00000428552 TLR6Q9Y2C9 796 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 FRMD4BQ9Y2L6 1034 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 OR51B4Q9Y5P0 310 aa8.28□□□□□ -1.08
CSTF1-203ENST00000428552 USP9YO00507 2555 aaPredicted RBP8.28□□□□□ -1.08
CSTF1-203ENST00000428552 USP9XQ93008 2570 aaPredicted RBP8.28□□□□□ -1.08
CSTF1-203ENST00000428552 SPTY2D1-AS1A0A0U1RR47 76 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 CPED1A4D0V7 1026 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 POM121BA6NF01 834 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 NTN3O00634 580 aaPredicted RBP8.27□□□□□ -1.09
CSTF1-203ENST00000428552 RAD51BO15315 384 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 GPR37O15354 613 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 SPINT1O43278 529 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 ACTN4O43707 911 aaKnown RBP8.27□□□□□ -1.09
CSTF1-203ENST00000428552 TCEA3O75764 348 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 MOCS3O95396 460 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 CALCAP01258 141 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 IGLV3-25P01717 112 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 CSF2P04141 144 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 SETSIPP0DME0 302 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 ALPPL2P10696 532 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 NME1P15531 152 aaKnown RBP8.27□□□□□ -1.09
CSTF1-203ENST00000428552 PDGFRAP16234 1089 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 CR2P20023 1033 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 PDCP20941 246 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 TACR2P21452 398 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 HNRNPA2B1P22626 353 aaKnown RBP8.27□□□□□ -1.09
CSTF1-203ENST00000428552 NR2F2P24468 414 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 SLC5A2P31639 672 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 IRAK1P51617 712 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 SLC8A3P57103 927 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 PITX1P78337 314 aaPredicted RBP8.27□□□□□ -1.09
CSTF1-203ENST00000428552 TLE1Q04724 770 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 NNTQ13423 1086 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 UBAP2LQ14157 1087 aaKnown RBP8.27□□□□□ -1.09
CSTF1-203ENST00000428552 CLCA4Q14CN2 919 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 TBR1Q16650 682 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 TSR1Q2NL82 804 aaKnown RBP8.27□□□□□ -1.09
CSTF1-203ENST00000428552 ZCWPW2Q504Y3 356 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 HS1BP3Q53T59 392 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 SGO2Q562F6 1265 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 SYPL2Q5VXT5 272 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 RNF219Q5W0B1 726 aaPredicted RBP8.27□□□□□ -1.09
CSTF1-203ENST00000428552 RAP1GAP2Q684P5 730 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 KRT39Q6A163 491 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 NEK5Q6P3R8 708 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 FOXR1Q6PIV2 292 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 LCLAT1Q6UWP7 414 aa8.27□□□□□ -1.09
CSTF1-203ENST00000428552 Q6ZSR6 202 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms