RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 RNF219Q5W0B1 726 aaPredicted RBP16.1■□□□□ 0.17
CLK3P2-201ENST00000427566 REXO1L1PQ8IX06 675 aa16.1■□□□□ 0.17
CLK3P2-201ENST00000427566 RHOT2Q8IXI1 618 aa16.1■□□□□ 0.17
CLK3P2-201ENST00000427566 TMEFF1Q8IYR6 380 aa16.1■□□□□ 0.17
CLK3P2-201ENST00000427566 KIF18AQ8NI77 898 aa16.1■□□□□ 0.17
CLK3P2-201ENST00000427566 HSPH1Q92598 858 aa16.1■□□□□ 0.17
CLK3P2-201ENST00000427566 TBC1D31Q96DN5 1066 aa16.1■□□□□ 0.17
CLK3P2-201ENST00000427566 MRGPRX1Q96LB2 322 aa16.1■□□□□ 0.17
CLK3P2-201ENST00000427566 LACRTQ9GZZ8 138 aa16.1■□□□□ 0.17
CLK3P2-201ENST00000427566 CD93Q9NPY3 652 aa16.1■□□□□ 0.17
CLK3P2-201ENST00000427566 TBC1D30Q9Y2I9 924 aa16.1■□□□□ 0.17
CLK3P2-201ENST00000427566 PPP2R2CQ9Y2T4 447 aa16.1■□□□□ 0.17
CLK3P2-201ENST00000427566 MTA2O94776 668 aa16.09■□□□□ 0.17
CLK3P2-201ENST00000427566 EPN2O95208 641 aa16.09■□□□□ 0.17
CLK3P2-201ENST00000427566 ASLP04424 464 aa16.09■□□□□ 0.17
CLK3P2-201ENST00000427566 RARAP10276 462 aa16.09■□□□□ 0.17
CLK3P2-201ENST00000427566 ACADMP11310 421 aa16.09■□□□□ 0.17
CLK3P2-201ENST00000427566 OR1E1P30953 314 aa16.09■□□□□ 0.17
CLK3P2-201ENST00000427566 SSR1P43307 286 aaKnown RBP16.09■□□□□ 0.17
CLK3P2-201ENST00000427566 ENPP2Q13822 863 aa16.09■□□□□ 0.17
CLK3P2-201ENST00000427566 MAP7D1Q3KQU3 841 aa16.09■□□□□ 0.17
CLK3P2-201ENST00000427566 PMS2CLQ68D20 193 aa16.09■□□□□ 0.17
CLK3P2-201ENST00000427566 LPCAT2Q7L5N7 544 aa16.09■□□□□ 0.17
CLK3P2-201ENST00000427566 TMPRSS6Q8IU80 811 aa16.09■□□□□ 0.17
CLK3P2-201ENST00000427566 GPR161Q8N6U8 529 aaKnown RBP16.09■□□□□ 0.17
CLK3P2-201ENST00000427566 PRCCQ92733 491 aaPredicted RBP16.09■□□□□ 0.17
CLK3P2-201ENST00000427566 SIPA1Q96FS4 1042 aa16.09■□□□□ 0.17
CLK3P2-201ENST00000427566 MYO19Q96H55 970 aa16.09■□□□□ 0.17
CLK3P2-201ENST00000427566 RPL10LQ96L21 214 aaKnown RBP16.09■□□□□ 0.17
CLK3P2-201ENST00000427566 FEM1AQ9BSK4 669 aa16.09■□□□□ 0.17
CLK3P2-201ENST00000427566 GOLPH3Q9H4A6 298 aa16.09■□□□□ 0.17
CLK3P2-201ENST00000427566 MTG2Q9H4K7 406 aa16.09■□□□□ 0.17
CLK3P2-201ENST00000427566 CD248Q9HCU0 757 aa16.09■□□□□ 0.17
CLK3P2-201ENST00000427566 SEMA4GQ9NTN9 838 aa16.09■□□□□ 0.17
CLK3P2-201ENST00000427566 DNAI1Q9UI46 699 aa16.09■□□□□ 0.17
CLK3P2-201ENST00000427566 MBD1Q9UIS9 605 aaPredicted RBP16.09■□□□□ 0.17
CLK3P2-201ENST00000427566 ERVW-1Q9UQF0 538 aa16.09■□□□□ 0.17
CLK3P2-201ENST00000427566 HYOU1Q9Y4L1 999 aa16.09■□□□□ 0.17
CLK3P2-201ENST00000427566 OR51B4Q9Y5P0 310 aa16.09■□□□□ 0.17
CLK3P2-201ENST00000427566 RIF1Q5UIP0 2472 aaKnown RBP16.08■□□□□ 0.17
CLK3P2-201ENST00000427566 PTPRZ1P23471 2315 aaPredicted RBP16.08■□□□□ 0.17
CLK3P2-201ENST00000427566 OTOGLQ3ZCN5 2332 aa16.08■□□□□ 0.17
CLK3P2-201ENST00000427566 ZNF217O75362 1048 aa16.08■□□□□ 0.16
CLK3P2-201ENST00000427566 CCDC175P0C221 793 aa16.08■□□□□ 0.16
CLK3P2-201ENST00000427566 GOT1P17174 413 aa16.08■□□□□ 0.16
CLK3P2-201ENST00000427566 EPHB2P29323 1055 aa16.08■□□□□ 0.16
CLK3P2-201ENST00000427566 GJC1P36383 396 aa16.08■□□□□ 0.16
CLK3P2-201ENST00000427566 RPL6Q02878 288 aaKnown RBP16.08■□□□□ 0.16
CLK3P2-201ENST00000427566 TCEAL1Q15170 157 aa16.08■□□□□ 0.16
CLK3P2-201ENST00000427566 PPP6R3Q5H9R7 873 aaPredicted RBP16.08■□□□□ 0.16
CLK3P2-201ENST00000427566 OR7D4Q8NG98 312 aa16.08■□□□□ 0.16
CLK3P2-201ENST00000427566 TTC17Q96AE7 1141 aa16.08■□□□□ 0.16
CLK3P2-201ENST00000427566 LOXL4Q96JB6 756 aa16.08■□□□□ 0.16
CLK3P2-201ENST00000427566 PSMB7Q99436 277 aa16.08■□□□□ 0.16
CLK3P2-201ENST00000427566 MKRN2Q9H000 416 aaKnown RBP16.08■□□□□ 0.16
CLK3P2-201ENST00000427566 MUC3BQ9H195 1237 aa16.08■□□□□ 0.16
CLK3P2-201ENST00000427566 TMEM245Q9H330 911 aa16.08■□□□□ 0.16
CLK3P2-201ENST00000427566 SMOC1Q9H4F8 434 aa16.08■□□□□ 0.16
CLK3P2-201ENST00000427566 SUN2Q9UH99 717 aa16.08■□□□□ 0.16
CLK3P2-201ENST00000427566 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.08■□□□□ 0.16
CLK3P2-201ENST00000427566 ADAMTS9Q9P2N4 1935 aa16.08■□□□□ 0.16
CLK3P2-201ENST00000427566 DYNC1I1O14576 645 aa16.07■□□□□ 0.16
CLK3P2-201ENST00000427566 NDUFS2O75306 463 aa16.07■□□□□ 0.16
CLK3P2-201ENST00000427566 RHOCP08134 193 aa16.07■□□□□ 0.16
CLK3P2-201ENST00000427566 RHOQP17081 205 aa16.07■□□□□ 0.16
CLK3P2-201ENST00000427566 GLDCP23378 1020 aa16.07■□□□□ 0.16
CLK3P2-201ENST00000427566 MPLP40238 635 aa16.07■□□□□ 0.16
CLK3P2-201ENST00000427566 NNMTP40261 264 aa16.07■□□□□ 0.16
CLK3P2-201ENST00000427566 NOP2P46087 812 aaKnown RBP16.07■□□□□ 0.16
CLK3P2-201ENST00000427566 STK19P49842 368 aaPredicted RBP16.07■□□□□ 0.16
CLK3P2-201ENST00000427566 PLK1P53350 603 aa16.07■□□□□ 0.16
CLK3P2-201ENST00000427566 OXCT1P55809 520 aa16.07■□□□□ 0.16
CLK3P2-201ENST00000427566 ETF1P62495 437 aaKnown RBP16.07■□□□□ 0.16
CLK3P2-201ENST00000427566 ECT2LQ008S8 904 aa16.07■□□□□ 0.16
CLK3P2-201ENST00000427566 SLC12A1Q13621 1099 aa16.07■□□□□ 0.16
CLK3P2-201ENST00000427566 SETD3Q86TU7 594 aaPredicted RBP16.07■□□□□ 0.16
CLK3P2-201ENST00000427566 NETO2Q8NC67 525 aa16.07■□□□□ 0.16
CLK3P2-201ENST00000427566 OR2T3Q8NH03 318 aa16.07■□□□□ 0.16
CLK3P2-201ENST00000427566 MRGPRX3Q96LB0 322 aa16.07■□□□□ 0.16
CLK3P2-201ENST00000427566 EPAS1Q99814 870 aa16.07■□□□□ 0.16
CLK3P2-201ENST00000427566 NOL6Q9H6R4 1146 aaKnown RBP16.07■□□□□ 0.16
CLK3P2-201ENST00000427566 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.07■□□□□ 0.16
CLK3P2-201ENST00000427566 KLHL11Q9NVR0 708 aa16.07■□□□□ 0.16
CLK3P2-201ENST00000427566 TMEM248Q9NWD8 314 aa16.07■□□□□ 0.16
CLK3P2-201ENST00000427566 CWC15Q9P013 229 aaKnown RBP16.07■□□□□ 0.16
CLK3P2-201ENST00000427566 TRIM10Q9UDY6 481 aa16.07■□□□□ 0.16
CLK3P2-201ENST00000427566 IGHV1OR15-9A0A0B4J2B8 117 aa16.06■□□□□ 0.16
CLK3P2-201ENST00000427566 TTC34A8MYJ7 566 aa16.06■□□□□ 0.16
CLK3P2-201ENST00000427566 EEF2KO00418 725 aaKnown RBP16.06■□□□□ 0.16
CLK3P2-201ENST00000427566 BUB1O43683 1085 aa16.06■□□□□ 0.16
CLK3P2-201ENST00000427566 BUB1BO60566 1050 aaPredicted RBP16.06■□□□□ 0.16
CLK3P2-201ENST00000427566 SNAP91O60641 907 aa16.06■□□□□ 0.16
CLK3P2-201ENST00000427566 CD48P09326 243 aa16.06■□□□□ 0.16
CLK3P2-201ENST00000427566 ACVRL1P37023 503 aa16.06■□□□□ 0.16
CLK3P2-201ENST00000427566 ARHGAP25P42331 645 aa16.06■□□□□ 0.16
CLK3P2-201ENST00000427566 VAV2P52735 878 aa16.06■□□□□ 0.16
CLK3P2-201ENST00000427566 COPAP53621 1224 aa16.06■□□□□ 0.16
CLK3P2-201ENST00000427566 TPI1P60174 286 aa16.06■□□□□ 0.16
CLK3P2-201ENST00000427566 SF3A2Q15428 464 aaKnown RBP16.06■□□□□ 0.16
CLK3P2-201ENST00000427566 DPYSL2Q16555 572 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms