RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 MCRS1Q96EZ8 462 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 ZNF518BQ9C0D4 1074 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 GRIP2Q9C0E4 1043 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 LIMD1Q9UGP4 676 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 DNPEPQ9ULA0 475 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 DCCP43146 1447 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 COX7A2P14406 83 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 NPY2RP49146 381 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 CHADLQ6NUI6 762 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 KCNT2Q6UVM3 1135 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 WRAP53Q9BUR4 548 aaKnown RBP13.37□□□□□ -0.27
SPG11-202ENST00000427534 TAS2R14Q9NYV8 317 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 ARMCX1Q9P291 453 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 CNPP09543 421 aaKnown RBP13.37□□□□□ -0.27
SPG11-202ENST00000427534 OR1D2P34982 312 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 CD151P48509 253 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 MYBPC2Q14324 1141 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 FAM182AQ5T1J6 154 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 C11orf88Q6PI97 169 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 MCOLN2Q8IZK6 566 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 ABRAQ8N0Z2 381 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 ACTRT1Q8TDG2 376 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 PRRG4Q9BZD6 226 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 IKZF4Q9H2S9 585 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 MST1RQ04912 1400 aa13.37□□□□□ -0.27
SPG11-202ENST00000427534 ZW10O43264 779 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 ZMPSTE24O75844 475 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 VAV1P15498 845 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 MIPP30301 263 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 BIKQ13323 160 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 ZSWIM7Q19AV6 140 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 CIR1Q86X95 450 aaPredicted RBP13.36□□□□□ -0.27
SPG11-202ENST00000427534 CDK20Q8IZL9 346 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 ELOVL4Q9GZR5 314 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 TNKS2Q9H2K2 1166 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 CD248Q9HCU0 757 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 MRPL39Q9NYK5 338 aaKnown RBP13.36□□□□□ -0.27
SPG11-202ENST00000427534 OR10H1Q9Y4A9 318 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 SEPT4O43236 478 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 HS6ST1O60243 411 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 ZNF7P17097 686 aaPredicted RBP13.36□□□□□ -0.27
SPG11-202ENST00000427534 RPL17P18621 184 aaKnown RBP13.36□□□□□ -0.27
SPG11-202ENST00000427534 ELAVL2Q12926 359 aaKnown RBP13.36□□□□□ -0.27
SPG11-202ENST00000427534 CSTF3Q12996 717 aaKnown RBP13.36□□□□□ -0.27
SPG11-202ENST00000427534 LINGO4Q6UY18 593 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 KCNK18Q7Z418 384 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 ILDR1Q86SU0 546 aaPredicted RBP13.36□□□□□ -0.27
SPG11-202ENST00000427534 IL31RAQ8NI17 732 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 PHACTR1Q9C0D0 580 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 NXF3Q9H4D5 531 aaKnown RBP13.36□□□□□ -0.27
SPG11-202ENST00000427534 EQTNQ9NQ60 294 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 OR12D3Q9UGF7 316 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 C1orf232A0A0U1RR37 186 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 CCNIQ14094 377 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 PSMD5Q16401 504 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 CATSPERGQ6ZRH7 1159 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 KLHL5Q96PQ7 755 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 OSBPL2Q9H1P3 480 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 PDE5AO76074 875 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 TUFMP49411 452 aaKnown RBP13.36□□□□□ -0.27
SPG11-202ENST00000427534 ANXA11P50995 505 aaKnown RBP13.36□□□□□ -0.27
SPG11-202ENST00000427534 CASP5P51878 434 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 ATP13A4Q4VNC1 1196 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 FBXO48Q5FWF7 155 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 HECTD3Q5T447 861 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 OLFM1Q99784 485 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 TOR4AQ9NXH8 423 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 SPATA31D1Q6ZQQ2 1576 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 TMEM88BA6NKF7 163 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 PEX1O43933 1283 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 TPBGLP0DKB5 382 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 MMP14P50281 582 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 UBXN2BQ14CS0 331 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 CDK5RAP1Q96SZ6 601 aaKnown RBP13.36□□□□□ -0.27
SPG11-202ENST00000427534 ENTPD4Q9Y227 616 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 ASTN2O75129 1339 aaPredicted RBP13.36□□□□□ -0.27
SPG11-202ENST00000427534 TIMM44O43615 452 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 PSMB9P28065 219 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 SERPINA4P29622 427 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 CNGA2Q16280 664 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 IQSEC1Q6DN90 963 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 CATSPER1Q8NEC5 780 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 B3GALT6Q96L58 329 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 TMEM237Q96Q45 408 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 MRPL45Q9BRJ2 306 aaKnown RBP13.36□□□□□ -0.27
SPG11-202ENST00000427534 FUT8Q9BYC5 575 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 CCDC134Q9H6E4 229 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 NAALADL1Q9UQQ1 740 aa13.36□□□□□ -0.27
SPG11-202ENST00000427534 ERAL1O75616 437 aaKnown RBP13.35□□□□□ -0.27
SPG11-202ENST00000427534 PROSCO94903 275 aa13.35□□□□□ -0.27
SPG11-202ENST00000427534 RENBPP51606 427 aa13.35□□□□□ -0.27
SPG11-202ENST00000427534 WLSQ5T9L3 541 aa13.35□□□□□ -0.27
SPG11-202ENST00000427534 ZCCHC8Q6NZY4 707 aaKnown RBP13.35□□□□□ -0.27
SPG11-202ENST00000427534 KDM7AQ6ZMT4 941 aa13.35□□□□□ -0.27
SPG11-202ENST00000427534 ARMCX6Q7L4S7 300 aa13.35□□□□□ -0.27
SPG11-202ENST00000427534 MCOLN3Q8TDD5 553 aa13.35□□□□□ -0.27
SPG11-202ENST00000427534 POPDC2Q9HBU9 364 aa13.35□□□□□ -0.27
SPG11-202ENST00000427534 KLRG2A4D1S0 409 aaPredicted RBP13.35□□□□□ -0.27
SPG11-202ENST00000427534 CCT8L1PA6NM43 557 aa13.35□□□□□ -0.27
SPG11-202ENST00000427534 PPP2R1BP30154 601 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms