RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 TLCD1Q96CP7 247 aa17.73■□□□□ 0.43
FN1-208ENST00000426059 PABPC5Q96DU9 382 aaKnown RBP17.73■□□□□ 0.43
FN1-208ENST00000426059 OXNAD1Q96HP4 312 aaPredicted RBP17.73■□□□□ 0.43
FN1-208ENST00000426059 PHACTR1Q9C0D0 580 aa17.73■□□□□ 0.43
FN1-208ENST00000426059 SMG9Q9H0W8 520 aaKnown RBP17.73■□□□□ 0.43
FN1-208ENST00000426059 RBM22Q9NW64 420 aaKnown RBP eCLIP17.73■□□□□ 0.436e-14■■□□□ 13.7
FN1-208ENST00000426059 ZC3H7BQ9UGR2 993 aaKnown RBP17.73■□□□□ 0.43
FN1-208ENST00000426059 TRHDEQ9UKU6 1024 aa17.73■□□□□ 0.43
FN1-208ENST00000426059 MAFFQ9ULX9 164 aa17.73■□□□□ 0.43
FN1-208ENST00000426059 HLA-DQB2P05538 268 aa17.73■□□□□ 0.43
FN1-208ENST00000426059 CREB1P16220 341 aa17.73■□□□□ 0.43
FN1-208ENST00000426059 EPCAMP16422 314 aa17.73■□□□□ 0.43
FN1-208ENST00000426059 PBX2P40425 430 aa17.73■□□□□ 0.43
FN1-208ENST00000426059 CCR2P41597 374 aa17.73■□□□□ 0.43
FN1-208ENST00000426059 SMAD1Q15797 465 aaKnown RBP17.73■□□□□ 0.43
FN1-208ENST00000426059 ZNF697Q5TEC3 545 aa17.73■□□□□ 0.43
FN1-208ENST00000426059 XPO6Q96QU8 1125 aaKnown RBP17.73■□□□□ 0.43
FN1-208ENST00000426059 CCDC77Q9BR77 488 aa17.73■□□□□ 0.43
FN1-208ENST00000426059 TTC24A2A3L6 582 aaPredicted RBP17.72■□□□□ 0.43
FN1-208ENST00000426059 RAMP2O60895 175 aa17.72■□□□□ 0.43
FN1-208ENST00000426059 PEX11BO96011 259 aa17.72■□□□□ 0.43
FN1-208ENST00000426059 MGAT1P26572 445 aa17.72■□□□□ 0.43
FN1-208ENST00000426059 NDST2P52849 883 aa17.72■□□□□ 0.43
FN1-208ENST00000426059 PABPC1LQ4VXU2 614 aaKnown RBP17.72■□□□□ 0.43
FN1-208ENST00000426059 PPM1LQ5SGD2 360 aa17.72■□□□□ 0.43
FN1-208ENST00000426059 CASC4Q6P4E1 433 aa17.72■□□□□ 0.43
FN1-208ENST00000426059 PRPF39Q86UA1 669 aaKnown RBP17.72■□□□□ 0.43
FN1-208ENST00000426059 VAT1Q99536 393 aa17.72■□□□□ 0.43
FN1-208ENST00000426059 MAN1C1Q9NR34 630 aa17.72■□□□□ 0.43
FN1-208ENST00000426059 ASB3Q9Y575 518 aa17.72■□□□□ 0.43
FN1-208ENST00000426059 ACTL7AQ9Y615 435 aa17.72■□□□□ 0.43
FN1-208ENST00000426059 SZT2Q5T011 3432 aa17.72■□□□□ 0.43
FN1-208ENST00000426059 TCRBV9S1A1TA0A576 114 aa17.72■□□□□ 0.43
FN1-208ENST00000426059 CPP00450 1065 aa17.72■□□□□ 0.43
FN1-208ENST00000426059 CKMP06732 381 aa17.72■□□□□ 0.43
FN1-208ENST00000426059 MAGEA10P43363 369 aaPredicted RBP17.72■□□□□ 0.43
FN1-208ENST00000426059 MAXP61244 160 aa17.72■□□□□ 0.43
FN1-208ENST00000426059 SLC10A7Q0GE19 358 aa17.72■□□□□ 0.43
FN1-208ENST00000426059 TMED2Q15363 201 aa17.72■□□□□ 0.43
FN1-208ENST00000426059 KDELC2Q7Z4H8 507 aa17.72■□□□□ 0.43
FN1-208ENST00000426059 MRPS31Q92665 395 aaKnown RBP17.72■□□□□ 0.43
FN1-208ENST00000426059 TCEAL4Q96EI5 215 aa17.72■□□□□ 0.43
FN1-208ENST00000426059 IL12RB2Q99665 862 aa17.72■□□□□ 0.43
FN1-208ENST00000426059 XAB2Q9HCS7 855 aaKnown RBP17.72■□□□□ 0.43
FN1-208ENST00000426059 AP2A1O95782 977 aa17.71■□□□□ 0.43
FN1-208ENST00000426059 PHBP35232 272 aa17.71■□□□□ 0.43
FN1-208ENST00000426059 ETFBP38117 255 aa17.71■□□□□ 0.43
FN1-208ENST00000426059 SARNPP82979 210 aaKnown RBP17.71■□□□□ 0.43
FN1-208ENST00000426059 ZNF33AQ06730 810 aa17.71■□□□□ 0.43
FN1-208ENST00000426059 ADGRF1Q5T601 910 aa17.71■□□□□ 0.43
FN1-208ENST00000426059 ITPRIPL1Q6GPH6 555 aa17.71■□□□□ 0.43
FN1-208ENST00000426059 LRRC8BQ6P9F7 803 aa17.71■□□□□ 0.43
FN1-208ENST00000426059 ELMOD1Q8N336 334 aa17.71■□□□□ 0.43
FN1-208ENST00000426059 OR7D4Q8NG98 312 aa17.71■□□□□ 0.43
FN1-208ENST00000426059 FRMD8Q9BZ67 464 aaPredicted RBP17.71■□□□□ 0.43
FN1-208ENST00000426059 SP110Q9HB58 689 aa17.71■□□□□ 0.43
FN1-208ENST00000426059 EIF2B3Q9NR50 452 aaKnown RBP17.71■□□□□ 0.43
FN1-208ENST00000426059 NEBLO76041 1014 aa17.71■□□□□ 0.42
FN1-208ENST00000426059 GUCY1A3Q02108 690 aa17.71■□□□□ 0.42
FN1-208ENST00000426059 KBTBD12Q3ZCT8 623 aa17.71■□□□□ 0.42
FN1-208ENST00000426059 KCTD11Q693B1 232 aa17.71■□□□□ 0.42
FN1-208ENST00000426059 TIGD7Q6NT04 549 aaPredicted RBP17.71■□□□□ 0.42
FN1-208ENST00000426059 UNC5AQ6ZN44 842 aa17.71■□□□□ 0.42
FN1-208ENST00000426059 EXOC3L1Q86VI1 746 aa17.71■□□□□ 0.42
FN1-208ENST00000426059 UNC5BQ8IZJ1 945 aa17.71■□□□□ 0.42
FN1-208ENST00000426059 MDM1Q8TC05 714 aa17.71■□□□□ 0.42
FN1-208ENST00000426059 EBNA1BP2Q99848 306 aaKnown RBP17.71■□□□□ 0.42
FN1-208ENST00000426059 SYBUQ9NX95 663 aa17.71■□□□□ 0.42
FN1-208ENST00000426059 YBX2Q9Y2T7 364 aaKnown RBP17.71■□□□□ 0.42
FN1-208ENST00000426059 MYO9BQ13459 2157 aa17.7■□□□□ 0.42
FN1-208ENST00000426059 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.7■□□□□ 0.42
FN1-208ENST00000426059 C5orf67F2Z3F1 127 aa17.7■□□□□ 0.42
FN1-208ENST00000426059 H3BNC9 293 aa17.7■□□□□ 0.42
FN1-208ENST00000426059 TCEA3O75764 348 aa17.7■□□□□ 0.42
FN1-208ENST00000426059 AGTP01019 485 aa17.7■□□□□ 0.42
FN1-208ENST00000426059 IVLP07476 585 aa17.7■□□□□ 0.42
FN1-208ENST00000426059 TPH1P17752 444 aa17.7■□□□□ 0.42
FN1-208ENST00000426059 CDK16Q00536 496 aa17.7■□□□□ 0.42
FN1-208ENST00000426059 TNFAIP8L3Q5GJ75 292 aa17.7■□□□□ 0.42
FN1-208ENST00000426059 CES3Q6UWW8 571 aa17.7■□□□□ 0.42
FN1-208ENST00000426059 KDM7AQ6ZMT4 941 aa17.7■□□□□ 0.42
FN1-208ENST00000426059 DNAAF3Q8N9W5 541 aa17.7■□□□□ 0.42
FN1-208ENST00000426059 ARHGEF2Q92974 986 aaKnown RBP17.7■□□□□ 0.42
FN1-208ENST00000426059 GLOD4Q9HC38 313 aa17.7■□□□□ 0.42
FN1-208ENST00000426059 NT5MQ9NPB1 228 aa17.7■□□□□ 0.42
FN1-208ENST00000426059 ASAH2Q9NR71 780 aa17.7■□□□□ 0.42
FN1-208ENST00000426059 EURLQ9NYK6 297 aa17.7■□□□□ 0.42
FN1-208ENST00000426059 RWDD3Q9Y3V2 267 aa17.7■□□□□ 0.42
FN1-208ENST00000426059 BPTFQ12830 3046 aa17.69■□□□□ 0.42
FN1-208ENST00000426059 GREM1O60565 184 aa17.69■□□□□ 0.42
FN1-208ENST00000426059 LPXNO60711 386 aa17.69■□□□□ 0.42
FN1-208ENST00000426059 CDH16O75309 829 aa17.69■□□□□ 0.42
FN1-208ENST00000426059 GJB3O75712 270 aa17.69■□□□□ 0.42
FN1-208ENST00000426059 OLFM2O95897 454 aa17.69■□□□□ 0.42
FN1-208ENST00000426059 GLDCP23378 1020 aa17.69■□□□□ 0.42
FN1-208ENST00000426059 PPP2R2AP63151 447 aa17.69■□□□□ 0.42
FN1-208ENST00000426059 NTHL1P78549 312 aa17.69■□□□□ 0.42
FN1-208ENST00000426059 ITKQ08881 620 aa17.69■□□□□ 0.42
FN1-208ENST00000426059 SERINC3Q13530 473 aa17.69■□□□□ 0.42
FN1-208ENST00000426059 C5orf22Q49AR2 442 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms