RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 GIPC1O14908 333 aa18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 BCAT2O15382 392 aaPredicted RBP18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 CCP110O43303 1012 aa18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 SMAD6O43541 496 aaKnown RBP18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 IGHV4-34P06331 123 aa18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 PLEKP08567 350 aaPredicted RBP18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 ADRB1P08588 477 aa18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 SKILP12757 684 aa18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 GNSP15586 552 aa18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 DRD3P35462 400 aa18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 PSMD8P48556 350 aa18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 MAMLD1Q13495 774 aa18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 ASIC2Q16515 512 aa18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 ARL13BQ3SXY8 428 aa18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 TTC31Q49AM3 519 aaPredicted RBP18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 ACCSLQ4AC99 568 aa18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 FIGNQ5HY92 759 aa18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 C6orf118Q5T5N4 469 aa18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 N4BP2L1Q5TBK1 243 aaPredicted RBP18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 SFMBT2Q5VUG0 894 aa18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 DNAJC24Q6P3W2 148 aa18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 PYROXD2Q8N2H3 581 aa18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 GANCQ8TET4 914 aa18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 NTAN1Q96AB6 310 aa18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 FAM131CQ96AQ9 280 aa18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 VCPIP1Q96JH7 1222 aa18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 MCEEQ96PE7 176 aa18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 EBF2Q9HAK2 575 aa18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 SLC25A13Q9UJS0 675 aa18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 PPM1HQ9ULR3 514 aa18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 NCKAP1Q9Y2A7 1128 aa18.79■□□□□ 0.6
SMARCAL1-205ENST00000425815 RNF103O00237 685 aa18.78■□□□□ 0.6
SMARCAL1-205ENST00000425815 PLK4O00444 970 aa18.78■□□□□ 0.6
SMARCAL1-205ENST00000425815 MCF2LO15068 1137 aa18.78■□□□□ 0.6
SMARCAL1-205ENST00000425815 ZNF821O75541 412 aaPredicted RBP18.78■□□□□ 0.6
SMARCAL1-205ENST00000425815 GJB3O75712 270 aa18.78■□□□□ 0.6
SMARCAL1-205ENST00000425815 RNASEH2AO75792 299 aaKnown RBP18.78■□□□□ 0.6
SMARCAL1-205ENST00000425815 LRIG2O94898 1065 aa18.78■□□□□ 0.6
SMARCAL1-205ENST00000425815 CD160O95971 181 aa18.78■□□□□ 0.6
SMARCAL1-205ENST00000425815 IL1BP01584 269 aa18.78■□□□□ 0.6
SMARCAL1-205ENST00000425815 GOT1P17174 413 aa18.78■□□□□ 0.6
SMARCAL1-205ENST00000425815 C5AR1P21730 350 aa18.78■□□□□ 0.6
SMARCAL1-205ENST00000425815 UBASH3AP57075 661 aa18.78■□□□□ 0.6
SMARCAL1-205ENST00000425815 KRT83P78385 493 aa18.78■□□□□ 0.6
SMARCAL1-205ENST00000425815 SEMA3BQ13214 749 aa18.78■□□□□ 0.6
SMARCAL1-205ENST00000425815 PLEKHA7Q6IQ23 1121 aa18.78■□□□□ 0.6
SMARCAL1-205ENST00000425815 NCEH1Q6PIU2 408 aa18.78■□□□□ 0.6
SMARCAL1-205ENST00000425815 LINGO4Q6UY18 593 aa18.78■□□□□ 0.6
SMARCAL1-205ENST00000425815 ZNF783Q6ZMS7 281 aa18.78■□□□□ 0.6
SMARCAL1-205ENST00000425815 Q6ZVU0 165 aa18.78■□□□□ 0.6
SMARCAL1-205ENST00000425815 HDDC3Q8N4P3 179 aa18.78■□□□□ 0.6
SMARCAL1-205ENST00000425815 MINDY1Q8N5J2 469 aa18.78■□□□□ 0.6
SMARCAL1-205ENST00000425815 DCAF4L2Q8NA75 395 aa18.78■□□□□ 0.6
SMARCAL1-205ENST00000425815 C2orf49Q9BVC5 232 aaPredicted RBP18.78■□□□□ 0.6
SMARCAL1-205ENST00000425815 DNAAF2Q9NVR5 837 aaKnown RBP18.78■□□□□ 0.6
SMARCAL1-205ENST00000425815 ACTL7AQ9Y615 435 aa18.78■□□□□ 0.6
SMARCAL1-205ENST00000425815 NCOR2Q9Y618 2525 aa18.78■□□□□ 0.6
SMARCAL1-205ENST00000425815 FSBPO95073 299 aa18.77■□□□□ 0.6
SMARCAL1-205ENST00000425815 ADH1BP00325 375 aa18.77■□□□□ 0.6
SMARCAL1-205ENST00000425815 FTLP02792 175 aaPredicted RBP18.77■□□□□ 0.6
SMARCAL1-205ENST00000425815 CTSLP07711 333 aa18.77■□□□□ 0.6
SMARCAL1-205ENST00000425815 SYPP08247 313 aa18.77■□□□□ 0.6
SMARCAL1-205ENST00000425815 RHOQP17081 205 aa18.77■□□□□ 0.6
SMARCAL1-205ENST00000425815 ACVRL1P37023 503 aa18.77■□□□□ 0.6
SMARCAL1-205ENST00000425815 GNA12Q03113 381 aa18.77■□□□□ 0.6
SMARCAL1-205ENST00000425815 SCAPQ12770 1279 aa18.77■□□□□ 0.6
SMARCAL1-205ENST00000425815 GRIK2Q13002 908 aa18.77■□□□□ 0.6
SMARCAL1-205ENST00000425815 HGSNATQ68CP4 663 aa18.77■□□□□ 0.6
SMARCAL1-205ENST00000425815 KIAA0895LQ68EN5 471 aa18.77■□□□□ 0.6
SMARCAL1-205ENST00000425815 PSAPL1Q6NUJ1 521 aa18.77■□□□□ 0.6
SMARCAL1-205ENST00000425815 PIP4P1Q86T03 277 aa18.77■□□□□ 0.6
SMARCAL1-205ENST00000425815 DRC7Q8IY82 874 aa18.77■□□□□ 0.6
SMARCAL1-205ENST00000425815 ARFGAP1Q8N6T3 406 aa18.77■□□□□ 0.6
SMARCAL1-205ENST00000425815 ATP11CQ8NB49 1132 aa18.77■□□□□ 0.6
SMARCAL1-205ENST00000425815 OR2A12Q8NGT7 310 aa18.77■□□□□ 0.6
SMARCAL1-205ENST00000425815 OMDQ99983 421 aa18.77■□□□□ 0.6
SMARCAL1-205ENST00000425815 CNPY3Q9BT09 278 aa18.77■□□□□ 0.6
SMARCAL1-205ENST00000425815 SPON2Q9BUD6 331 aa18.77■□□□□ 0.6
SMARCAL1-205ENST00000425815 ACE2Q9BYF1 805 aaPredicted RBP18.77■□□□□ 0.6
SMARCAL1-205ENST00000425815 FZD4Q9ULV1 537 aa18.77■□□□□ 0.6
SMARCAL1-205ENST00000425815 PCDH15Q96QU1 1955 aa18.77■□□□□ 0.59
SMARCAL1-205ENST00000425815 FAM47DPA6NHR8 397 aa18.76■□□□□ 0.59
SMARCAL1-205ENST00000425815 UPK3BL1B0FP48 263 aa18.76■□□□□ 0.59
SMARCAL1-205ENST00000425815 UPK3BL2E5RIL1 263 aa18.76■□□□□ 0.59
SMARCAL1-205ENST00000425815 ATMINO43313 823 aaPredicted RBP18.76■□□□□ 0.59
SMARCAL1-205ENST00000425815 GZMAP12544 262 aa18.76■□□□□ 0.59
SMARCAL1-205ENST00000425815 CD59P13987 128 aa18.76■□□□□ 0.59
SMARCAL1-205ENST00000425815 PTMSP20962 102 aa18.76■□□□□ 0.59
SMARCAL1-205ENST00000425815 CSRP1P21291 193 aaKnown RBP18.76■□□□□ 0.59
SMARCAL1-205ENST00000425815 CD27P26842 260 aa18.76■□□□□ 0.59
SMARCAL1-205ENST00000425815 CSNK1EP49674 416 aaKnown RBP18.76■□□□□ 0.59
SMARCAL1-205ENST00000425815 ARF5P84085 180 aa18.76■□□□□ 0.59
SMARCAL1-205ENST00000425815 KLHL30Q0D2K2 578 aa18.76■□□□□ 0.59
SMARCAL1-205ENST00000425815 RWDD4Q6NW29 188 aaKnown RBP18.76■□□□□ 0.59
SMARCAL1-205ENST00000425815 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.76■□□□□ 0.59
SMARCAL1-205ENST00000425815 SLFN11Q7Z7L1 901 aa18.76■□□□□ 0.59
SMARCAL1-205ENST00000425815 CHST14Q8NCH0 376 aa18.76■□□□□ 0.59
SMARCAL1-205ENST00000425815 OR8D1Q8WZ84 308 aa18.76■□□□□ 0.59
SMARCAL1-205ENST00000425815 SNX19Q92543 992 aa18.76■□□□□ 0.59
SMARCAL1-205ENST00000425815 IL21RQ9HBE5 538 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms