RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 SMTNL1A8MU46 457 aa13.09□□□□□ -0.31
SGCE-203ENST00000425444 DNTTP04053 509 aa13.09□□□□□ -0.31
SGCE-203ENST00000425444 ATP1A3P13637 1013 aa13.09□□□□□ -0.31
SGCE-203ENST00000425444 PDGFRAP16234 1089 aa13.09□□□□□ -0.31
SGCE-203ENST00000425444 OXTRP30559 389 aa13.09□□□□□ -0.31
SGCE-203ENST00000425444 HNF1BP35680 557 aa13.09□□□□□ -0.31
SGCE-203ENST00000425444 GRK6P43250 576 aa13.09□□□□□ -0.31
SGCE-203ENST00000425444 NUMBP49757 651 aa13.09□□□□□ -0.31
SGCE-203ENST00000425444 TPMTP51580 245 aa13.09□□□□□ -0.31
SGCE-203ENST00000425444 FMO1Q01740 532 aa13.09□□□□□ -0.31
SGCE-203ENST00000425444 CENPCQ03188 943 aa13.09□□□□□ -0.31
SGCE-203ENST00000425444 TLE3Q04726 772 aa13.09□□□□□ -0.31
SGCE-203ENST00000425444 CCDC173Q0VFZ6 552 aa13.09□□□□□ -0.31
SGCE-203ENST00000425444 CAMK2GQ13555 558 aaPredicted RBP13.09□□□□□ -0.31
SGCE-203ENST00000425444 AUHQ13825 339 aaKnown RBP13.09□□□□□ -0.31
SGCE-203ENST00000425444 BRMS1LQ5PSV4 323 aa13.09□□□□□ -0.31
SGCE-203ENST00000425444 OTUD1Q5VV17 481 aaPredicted RBP13.09□□□□□ -0.31
SGCE-203ENST00000425444 TRIM72Q6ZMU5 477 aa13.09□□□□□ -0.31
SGCE-203ENST00000425444 FAM124AQ86V42 546 aa13.09□□□□□ -0.31
SGCE-203ENST00000425444 CCAR2Q8N163 923 aaKnown RBP13.09□□□□□ -0.31
SGCE-203ENST00000425444 TTC17Q96AE7 1141 aa13.09□□□□□ -0.31
SGCE-203ENST00000425444 LMLNQ96KR4 655 aa13.09□□□□□ -0.31
SGCE-203ENST00000425444 TBCBQ99426 244 aa13.09□□□□□ -0.31
SGCE-203ENST00000425444 NPY6RQ99463 290 aa13.09□□□□□ -0.31
SGCE-203ENST00000425444 PRMT1Q99873 361 aaKnown RBP13.09□□□□□ -0.31
SGCE-203ENST00000425444 C11orf70Q9BRQ4 267 aa13.09□□□□□ -0.31
SGCE-203ENST00000425444 GPR174Q9BXC1 333 aa13.09□□□□□ -0.31
SGCE-203ENST00000425444 TKTL2Q9H0I9 626 aa13.09□□□□□ -0.31
SGCE-203ENST00000425444 SIK2Q9H0K1 926 aa13.09□□□□□ -0.31
SGCE-203ENST00000425444 ITM2CQ9NQX7 267 aa13.09□□□□□ -0.31
SGCE-203ENST00000425444 METTL5Q9NRN9 209 aaKnown RBP13.09□□□□□ -0.31
SGCE-203ENST00000425444 NOCTQ9UK39 431 aaKnown RBP13.09□□□□□ -0.31
SGCE-203ENST00000425444 INTS6Q9UL03 887 aaKnown RBP13.09□□□□□ -0.31
SGCE-203ENST00000425444 UTP20O75691 2785 aaKnown RBP13.09□□□□□ -0.31
SGCE-203ENST00000425444 CREBBPQ92793 2442 aa13.08□□□□□ -0.32
SGCE-203ENST00000425444 A0A1B0GVT2 93 aa13.08□□□□□ -0.32
SGCE-203ENST00000425444 SLC28A2O43868 658 aa13.08□□□□□ -0.32
SGCE-203ENST00000425444 RNASEH1O60930 286 aaKnown RBP13.08□□□□□ -0.32
SGCE-203ENST00000425444 PAGE1O75459 146 aa13.08□□□□□ -0.32
SGCE-203ENST00000425444 F9P00740 461 aa13.08□□□□□ -0.32
SGCE-203ENST00000425444 CYP1A1P04798 512 aaPredicted RBP13.08□□□□□ -0.32
SGCE-203ENST00000425444 TFE3P19532 575 aaPredicted RBP13.08□□□□□ -0.32
SGCE-203ENST00000425444 FLT3P36888 993 aa13.08□□□□□ -0.32
SGCE-203ENST00000425444 CTSOP43234 321 aaPredicted RBP13.08□□□□□ -0.32
SGCE-203ENST00000425444 NSFP46459 744 aaKnown RBP13.08□□□□□ -0.32
SGCE-203ENST00000425444 OXCT1P55809 520 aa13.08□□□□□ -0.32
SGCE-203ENST00000425444 CLDN6P56747 220 aa13.08□□□□□ -0.32
SGCE-203ENST00000425444 MAPK8IP2Q13387 824 aaPredicted RBP13.08□□□□□ -0.32
SGCE-203ENST00000425444 SLC12A1Q13621 1099 aa13.08□□□□□ -0.32
SGCE-203ENST00000425444 SLC25A52Q3SY17 297 aa13.08□□□□□ -0.32
SGCE-203ENST00000425444 TTC31Q49AM3 519 aaPredicted RBP13.08□□□□□ -0.32
SGCE-203ENST00000425444 FILIP1LQ4L180 1135 aa13.08□□□□□ -0.32
SGCE-203ENST00000425444 DCAF12L1Q5VU92 463 aa13.08□□□□□ -0.32
SGCE-203ENST00000425444 ZNF776Q68DI1 518 aaPredicted RBP13.08□□□□□ -0.32
SGCE-203ENST00000425444 FBXL22Q6P050 247 aa13.08□□□□□ -0.32
SGCE-203ENST00000425444 PHLDB2Q86SQ0 1253 aa13.08□□□□□ -0.32
SGCE-203ENST00000425444 DHX40Q8IX18 779 aaKnown RBP13.08□□□□□ -0.32
SGCE-203ENST00000425444 APCDD1Q8J025 514 aa13.08□□□□□ -0.32
SGCE-203ENST00000425444 SNIP1Q8TAD8 396 aaKnown RBP13.08□□□□□ -0.32
SGCE-203ENST00000425444 IGSF8Q969P0 613 aa13.08□□□□□ -0.32
SGCE-203ENST00000425444 ERGIC2Q96RQ1 377 aa13.08□□□□□ -0.32
SGCE-203ENST00000425444 BPIFA3Q9BQP9 254 aa13.08□□□□□ -0.32
SGCE-203ENST00000425444 NUP58Q9BVL2 599 aa13.08□□□□□ -0.32
SGCE-203ENST00000425444 SEMA4CQ9C0C4 833 aa13.08□□□□□ -0.32
SGCE-203ENST00000425444 MTG2Q9H4K7 406 aa13.08□□□□□ -0.32
SGCE-203ENST00000425444 PRSS16Q9NQE7 514 aa13.08□□□□□ -0.32
SGCE-203ENST00000425444 WSB2Q9NYS7 404 aaPredicted RBP13.08□□□□□ -0.32
SGCE-203ENST00000425444 ERVW-1Q9UQF0 538 aa13.08□□□□□ -0.32
SGCE-203ENST00000425444 CKAP5Q14008 2032 aa13.08□□□□□ -0.32
SGCE-203ENST00000425444 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.07□□□□□ -0.32
SGCE-203ENST00000425444 LRRC10BA6NIK2 292 aa13.07□□□□□ -0.32
SGCE-203ENST00000425444 SIN3BO75182 1162 aa13.07□□□□□ -0.32
SGCE-203ENST00000425444 ADCY5O95622 1261 aa13.07□□□□□ -0.32
SGCE-203ENST00000425444 SRPRAP08240 638 aaKnown RBP13.07□□□□□ -0.32
SGCE-203ENST00000425444 C6P13671 934 aa13.07□□□□□ -0.32
SGCE-203ENST00000425444 CHRNB2P17787 502 aa13.07□□□□□ -0.32
SGCE-203ENST00000425444 NNMTP40261 264 aa13.07□□□□□ -0.32
SGCE-203ENST00000425444 CXCR3P49682 368 aa13.07□□□□□ -0.32
SGCE-203ENST00000425444 ECT2LQ008S8 904 aa13.07□□□□□ -0.32
SGCE-203ENST00000425444 SULT2A1Q06520 285 aa13.07□□□□□ -0.32
SGCE-203ENST00000425444 ZNF177Q13360 481 aaPredicted RBP13.07□□□□□ -0.32
SGCE-203ENST00000425444 APTXQ7Z2E3 356 aaKnown RBP13.07□□□□□ -0.32
SGCE-203ENST00000425444 SPACA3Q8IXA5 215 aa13.07□□□□□ -0.32
SGCE-203ENST00000425444 EMC1Q8N766 993 aa13.07□□□□□ -0.32
SGCE-203ENST00000425444 KDM1BQ8NB78 822 aa13.07□□□□□ -0.32
SGCE-203ENST00000425444 SLC30A5Q8TAD4 765 aa13.07□□□□□ -0.32
SGCE-203ENST00000425444 GANCQ8TET4 914 aa13.07□□□□□ -0.32
SGCE-203ENST00000425444 SNX19Q92543 992 aa13.07□□□□□ -0.32
SGCE-203ENST00000425444 FGF11Q92914 225 aa13.07□□□□□ -0.32
SGCE-203ENST00000425444 PGAP3Q96FM1 320 aaPredicted RBP13.07□□□□□ -0.32
SGCE-203ENST00000425444 WBP1Q96G27 269 aa13.07□□□□□ -0.32
SGCE-203ENST00000425444 RPL10LQ96L21 214 aaKnown RBP13.07□□□□□ -0.32
SGCE-203ENST00000425444 MRGPRX3Q96LB0 322 aa13.07□□□□□ -0.32
SGCE-203ENST00000425444 CFAP57Q96MR6 1250 aa13.07□□□□□ -0.32
SGCE-203ENST00000425444 PPP1R9BQ96SB3 815 aa13.07□□□□□ -0.32
SGCE-203ENST00000425444 HSD3B7Q9H2F3 369 aa13.07□□□□□ -0.32
SGCE-203ENST00000425444 TMEM51Q9NW97 253 aa13.07□□□□□ -0.32
SGCE-203ENST00000425444 ARHGEF38Q9NXL2 777 aa13.07□□□□□ -0.32
SGCE-203ENST00000425444 FTSJ1Q9UET6 329 aa13.07□□□□□ -0.32
SGCE-203ENST00000425444 EIF2B4Q9UI10 523 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms