RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 MS4A13Q5J8X5 152 aa16.03■□□□□ 0.16
SHOX2-202ENST00000425436 C6orf118Q5T5N4 469 aa16.03■□□□□ 0.16
SHOX2-202ENST00000425436 IZUMO3Q5VZ72 239 aa16.03■□□□□ 0.16
SHOX2-202ENST00000425436 HIBCHQ6NVY1 386 aaPredicted RBP16.03■□□□□ 0.16
SHOX2-202ENST00000425436 TPRG1Q6ZUI0 275 aa16.03■□□□□ 0.16
SHOX2-202ENST00000425436 C14orf80Q86SX3 495 aa16.03■□□□□ 0.16
SHOX2-202ENST00000425436 FAM217AQ8IXS0 508 aa16.03■□□□□ 0.16
SHOX2-202ENST00000425436 CFAP52Q8N1V2 620 aa16.03■□□□□ 0.16
SHOX2-202ENST00000425436 DDI1Q8WTU0 396 aa16.03■□□□□ 0.16
SHOX2-202ENST00000425436 P3H4Q92791 437 aa16.03■□□□□ 0.16
SHOX2-202ENST00000425436 PEBP4Q96S96 227 aa16.03■□□□□ 0.16
SHOX2-202ENST00000425436 BBS2Q9BXC9 721 aa16.03■□□□□ 0.16
SHOX2-202ENST00000425436 STMN4Q9H169 189 aaPredicted RBP16.03■□□□□ 0.16
SHOX2-202ENST00000425436 EPHX3Q9H6B9 360 aa16.03■□□□□ 0.16
SHOX2-202ENST00000425436 ARHGEF3Q9NR81 526 aa16.03■□□□□ 0.16
SHOX2-202ENST00000425436 RCOR3Q9P2K3 495 aaPredicted RBP16.03■□□□□ 0.16
SHOX2-202ENST00000425436 TPX2Q9ULW0 747 aaKnown RBP16.03■□□□□ 0.16
SHOX2-202ENST00000425436 SPECC1L-ADORA2AF8WAN1 911 aa16.02■□□□□ 0.15
SHOX2-202ENST00000425436 DNALI1O14645 258 aaPredicted RBP16.02■□□□□ 0.15
SHOX2-202ENST00000425436 ZNF189O75820 626 aaPredicted RBP16.02■□□□□ 0.15
SHOX2-202ENST00000425436 TYRP14679 529 aa16.02■□□□□ 0.15
SHOX2-202ENST00000425436 TACR2P21452 398 aa16.02■□□□□ 0.15
SHOX2-202ENST00000425436 ADRA1BP35368 520 aa16.02■□□□□ 0.15
SHOX2-202ENST00000425436 GAD2Q05329 585 aa16.02■□□□□ 0.15
SHOX2-202ENST00000425436 SIGLEC14Q08ET2 396 aa16.02■□□□□ 0.15
SHOX2-202ENST00000425436 DPYSL2Q16555 572 aa16.02■□□□□ 0.15
SHOX2-202ENST00000425436 TTMPQ5BVD1 217 aa16.02■□□□□ 0.15
SHOX2-202ENST00000425436 TXNDC11Q6PKC3 985 aa16.02■□□□□ 0.15
SHOX2-202ENST00000425436 C4orf22Q6V702 233 aa16.02■□□□□ 0.15
SHOX2-202ENST00000425436 TRIM67Q6ZTA4 783 aa16.02■□□□□ 0.15
SHOX2-202ENST00000425436 CYP4V2Q6ZWL3 525 aaPredicted RBP16.02■□□□□ 0.15
SHOX2-202ENST00000425436 BZW1Q7L1Q6 419 aaKnown RBP16.02■□□□□ 0.15
SHOX2-202ENST00000425436 C12orf40Q86WS4 652 aa16.02■□□□□ 0.15
SHOX2-202ENST00000425436 CHSY1Q86X52 802 aa16.02■□□□□ 0.15
SHOX2-202ENST00000425436 LGI2Q8N0V4 545 aa16.02■□□□□ 0.15
SHOX2-202ENST00000425436 CPXM2Q8N436 756 aa16.02■□□□□ 0.15
SHOX2-202ENST00000425436 ZCCHC9Q8N567 271 aaKnown RBP16.02■□□□□ 0.15
SHOX2-202ENST00000425436 ARL8AQ96BM9 186 aa16.02■□□□□ 0.15
SHOX2-202ENST00000425436 HAUS1Q96CS2 278 aa16.02■□□□□ 0.15
SHOX2-202ENST00000425436 TMA16Q96EY4 203 aaKnown RBP16.02■□□□□ 0.15
SHOX2-202ENST00000425436 PRMT1Q99873 361 aaKnown RBP16.02■□□□□ 0.15
SHOX2-202ENST00000425436 PHACTR1Q9C0D0 580 aa16.02■□□□□ 0.15
SHOX2-202ENST00000425436 SHISA7A6NL88 538 aa16.01■□□□□ 0.15
SHOX2-202ENST00000425436 STK25O00506 426 aa16.01■□□□□ 0.15
SHOX2-202ENST00000425436 APOL1O14791 398 aa16.01■□□□□ 0.15
SHOX2-202ENST00000425436 TRIM24O15164 1050 aa16.01■□□□□ 0.15
SHOX2-202ENST00000425436 RIPK2O43353 540 aa16.01■□□□□ 0.15
SHOX2-202ENST00000425436 PDGFBP01127 241 aaPredicted RBP16.01■□□□□ 0.15
SHOX2-202ENST00000425436 CTHP32929 405 aa16.01■□□□□ 0.15
SHOX2-202ENST00000425436 NR2C2P49116 596 aa16.01■□□□□ 0.15
SHOX2-202ENST00000425436 MLLT6P55198 1093 aaPredicted RBP16.01■□□□□ 0.15
SHOX2-202ENST00000425436 EIF3EP60228 445 aaKnown RBP16.01■□□□□ 0.15
SHOX2-202ENST00000425436 RPS24P62847 133 aaKnown RBP16.01■□□□□ 0.15
SHOX2-202ENST00000425436 AUHQ13825 339 aaKnown RBP16.01■□□□□ 0.15
SHOX2-202ENST00000425436 TRIP13Q15645 432 aaPredicted RBP16.01■□□□□ 0.15
SHOX2-202ENST00000425436 P3H1Q32P28 736 aa16.01■□□□□ 0.15
SHOX2-202ENST00000425436 ARL13BQ3SXY8 428 aa16.01■□□□□ 0.15
SHOX2-202ENST00000425436 FYB2Q5VWT5 728 aa16.01■□□□□ 0.15
SHOX2-202ENST00000425436 FBXL22Q6P050 247 aa16.01■□□□□ 0.15
SHOX2-202ENST00000425436 FAF2Q96CS3 445 aa16.01■□□□□ 0.15
SHOX2-202ENST00000425436 PRICKLE1Q96MT3 831 aaPredicted RBP16.01■□□□□ 0.15
SHOX2-202ENST00000425436 DDX50Q9BQ39 737 aaKnown RBP16.01■□□□□ 0.15
SHOX2-202ENST00000425436 PCDH18Q9HCL0 1135 aa16.01■□□□□ 0.15
SHOX2-202ENST00000425436 FBRSL1Q9HCM7 1045 aaKnown RBP16.01■□□□□ 0.15
SHOX2-202ENST00000425436 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.01■□□□□ 0.15
SHOX2-202ENST00000425436 VANGL2Q9ULK5 521 aa16.01■□□□□ 0.15
SHOX2-202ENST00000425436 CLEC4EQ9ULY5 219 aa16.01■□□□□ 0.15
SHOX2-202ENST00000425436 F5P12259 2224 aa16.01■□□□□ 0.15
SHOX2-202ENST00000425436 F5H5T6 163 aa16■□□□□ 0.15
SHOX2-202ENST00000425436 GFRA2O00451 464 aa16■□□□□ 0.15
SHOX2-202ENST00000425436 TP73O15350 636 aa16■□□□□ 0.15
SHOX2-202ENST00000425436 TBL1XO60907 577 aa16■□□□□ 0.15
SHOX2-202ENST00000425436 CYBBP04839 570 aa16■□□□□ 0.15
SHOX2-202ENST00000425436 CD48P09326 243 aa16■□□□□ 0.15
SHOX2-202ENST00000425436 ACTN2P35609 894 aa16■□□□□ 0.15
SHOX2-202ENST00000425436 GALK1P51570 392 aa16■□□□□ 0.15
SHOX2-202ENST00000425436 DYNLT1P63172 113 aa16■□□□□ 0.15
SHOX2-202ENST00000425436 SKOR1P84550 965 aa16■□□□□ 0.15
SHOX2-202ENST00000425436 GPS1Q13098 491 aa16■□□□□ 0.15
SHOX2-202ENST00000425436 SLC29A2Q14542 456 aa16■□□□□ 0.15
SHOX2-202ENST00000425436 NOMO1Q15155 1222 aa16■□□□□ 0.15
SHOX2-202ENST00000425436 PON2Q15165 354 aa16■□□□□ 0.15
SHOX2-202ENST00000425436 KRT71Q3SY84 523 aa16■□□□□ 0.15
SHOX2-202ENST00000425436 MPPE1Q53F39 396 aa16■□□□□ 0.15
SHOX2-202ENST00000425436 ANKRD20A8PQ5CZ79 823 aa16■□□□□ 0.15
SHOX2-202ENST00000425436 SLC9A4Q6AI14 798 aa16■□□□□ 0.15
SHOX2-202ENST00000425436 RALGPS2Q86X27 583 aaPredicted RBP16■□□□□ 0.15
SHOX2-202ENST00000425436 PYROXD2Q8N2H3 581 aa16■□□□□ 0.15
SHOX2-202ENST00000425436 FAM3CQ92520 227 aa16■□□□□ 0.15
SHOX2-202ENST00000425436 IGSF8Q969P0 613 aa16■□□□□ 0.15
SHOX2-202ENST00000425436 PGM2Q96G03 612 aa16■□□□□ 0.15
SHOX2-202ENST00000425436 TTC25Q96NG3 672 aa16■□□□□ 0.15
SHOX2-202ENST00000425436 HAPLN3Q96S86 360 aa16■□□□□ 0.15
SHOX2-202ENST00000425436 CCDC77Q9BR77 488 aa16■□□□□ 0.15
SHOX2-202ENST00000425436 TMEM121Q9BTD3 319 aa16■□□□□ 0.15
SHOX2-202ENST00000425436 SNRNP25Q9BV90 132 aaKnown RBP16■□□□□ 0.15
SHOX2-202ENST00000425436 SEMA4AQ9H3S1 761 aa16■□□□□ 0.15
SHOX2-202ENST00000425436 C8orf33Q9H7E9 229 aaPredicted RBP16■□□□□ 0.15
SHOX2-202ENST00000425436 GPATCH2LQ9NWQ4 482 aa16■□□□□ 0.15
SHOX2-202ENST00000425436 FZD10Q9ULW2 581 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms