RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 TNK2Q07912 1038 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 DENND1BQ6P3S1 775 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 EPGNQ6UW88 154 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 ACVR1CQ8NER5 493 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 CXorf38Q8TB03 319 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 LPGAT1Q92604 370 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 PALMDQ9NP74 551 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 NXF1Q9UBU9 619 aaKnown RBP11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 KLQ9UEF7 1012 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 TCEAL9Q9UHQ7 104 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 RNF103-CHMP3A0A140T963 221 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 SPDYE2BA6NHP3 402 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 APOC4-APOC2K7ER74 178 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 SULT1C4O75897 302 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 APOC2P02655 101 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 CAPNS1P04632 268 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 SPDYE6P0CI01 402 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 IDUAP35475 653 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 PIGFQ07326 219 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 PIGHQ14442 188 aaPredicted RBP11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 SPDYE2Q495Y8 402 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 TIGD2Q4W5G0 525 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 ZNF618Q5T7W0 954 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 C16orf89Q6UX73 402 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 SIX6OS1Q8N1H7 587 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 CATSPER1Q8NEC5 780 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 CANT1Q8WVQ1 401 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 ACDQ96AP0 544 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 PIWIL1Q96J94 861 aaKnown RBP11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 ZNF668Q96K58 619 aaPredicted RBP11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 ZNF597Q96LX8 424 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 DNAJC28Q9NX36 388 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 CCDC167Q9P0B6 97 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 EGFL7Q9UHF1 273 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 USP12O75317 370 aa11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 MYO1DO94832 1006 aa11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 ESRRBO95718 433 aa11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 PRKCHP24723 683 aa11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 PTPN9P43378 593 aa11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 TXNL4AP83876 142 aaKnown RBP11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 CLCQ05315 142 aa11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 ZACNQ401N2 412 aa11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 CPXCR1Q8N123 301 aa11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 ACER1Q8TDN7 264 aa11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 HAPLN2Q9GZV7 340 aa11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 MIR1-1HGQ9H1L0 117 aa11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 BCAP29Q9UHQ4 241 aa11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 USP18Q9UMW8 372 aa11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 TK2O00142 265 aa11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 BCAS2O75934 225 aaPredicted RBP11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 INHBBP09529 407 aa11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 JAK1P23458 1154 aa11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 CDH8P55286 799 aa11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 OSTNP61366 133 aa11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 LSM3P62310 102 aaKnown RBP11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 LRRC8EQ6NSJ5 796 aa11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 PODNQ7Z5L7 613 aa11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 ZNF677Q86XU0 584 aa11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 CPB2Q96IY4 423 aa11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 FEM1CQ96JP0 617 aa11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 SLC45A3Q96JT2 553 aa11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 SIGLEC10Q96LC7 697 aa11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 GIN1Q9NXP7 522 aa11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 COL20A1Q9P218 1284 aa11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 EXOC7Q9UPT5 735 aa11.49□□□□□ -0.57
SEC61A1-202ENST00000424880 PRORSD1PA6NEY8 169 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 ZBBXA8MT70 800 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 G3V3G9 751 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 C4BPAP04003 597 aaKnown RBP11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 C8BP07358 591 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 ACAT1P24752 427 aaKnown RBP11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 ALDH4A1P30038 563 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 OPRL1P41146 370 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 HSPA13P48723 471 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 YBX1P67809 324 aaKnown RBP11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 ADAM17P78536 824 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 PRKCQQ04759 706 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 AOC3Q16853 763 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 DACT2Q5SW24 774 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 DCAF8Q5TAQ9 597 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 STYK1Q6J9G0 422 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 C12orf56Q8IXR9 622 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 SLC16A10Q8TF71 515 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 SREK1Q8WXA9 508 aaKnown RBP11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 SPATA17Q96L03 361 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 CPXM1Q96SM3 734 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 OMDQ99983 421 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 LTB4R2Q9NPC1 389 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 KCND2Q9NZV8 630 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 ZDHHC2Q9UIJ5 367 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 ERGIC3Q9Y282 383 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 FOCADQ5VW36 1801 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 FAM47E-STBD1D6RA91 191 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 AVPR1AP37288 418 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 CRKP46108 304 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 GSSP48637 474 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 NAGLUP54802 743 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 PHKG1Q16816 387 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 HADHQ16836 314 aaKnown RBP11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 ZIK1Q3SY52 487 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms